Basic Information

Insect: Spicauda simplicius
Gene Symbol: Znf296
Assembly: GCA_949699795.1
Location: OX453056.1:234985-258472[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0077 0.7 11.2 0.0 2 20 152 170 151 174 0.92

2 12 9.1 8.3e+02 1.6 2.3 2 20 239 257 238 259 0.90

3 12 0.12 11 7.5 0.0 3 23 312 333 311 333 0.89

4 12 0.53 48 5.4 0.2 2 10 339 347 338 357 0.82

5 12 0.00048 0.044 15.0 0.7 1 23 367 390 367 390 0.95

6 12 0.00072 0.065 14.5 6.0 1 23 403 425 403 425 0.97

7 12 3.2e-06 0.00029 21.9 4.7 1 23 432 454 432 454 0.99

8 12 3.7e-07 3.4e-05 24.8 1.7 3 23 477 497 475 497 0.96

9 12 2.7e-05 0.0025 18.9 3.2 1 23 503 525 503 525 0.99

10 12 6.2e-07 5.6e-05 24.1 1.6 2 23 532 553 531 553 0.96

11 12 1e-06 9.3e-05 23.4 1.4 1 23 559 581 559 581 0.99

12 12 0.00027 0.025 15.8 0.4 1 23 587 609 587 609 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0077	0.7	11.2	0.0	2	20	152	170	151	174	0.92
2	12	9.1	8.3e+02	1.6	2.3	2	20	239	257	238	259	0.90
3	12	0.12	11	7.5	0.0	3	23	312	333	311	333	0.89
4	12	0.53	48	5.4	0.2	2	10	339	347	338	357	0.82
5	12	0.00048	0.044	15.0	0.7	1	23	367	390	367	390	0.95
6	12	0.00072	0.065	14.5	6.0	1	23	403	425	403	425	0.97
7	12	3.2e-06	0.00029	21.9	4.7	1	23	432	454	432	454	0.99
8	12	3.7e-07	3.4e-05	24.8	1.7	3	23	477	497	475	497	0.96
9	12	2.7e-05	0.0025	18.9	3.2	1	23	503	525	503	525	0.99
10	12	6.2e-07	5.6e-05	24.1	1.6	2	23	532	553	531	553	0.96
11	12	1e-06	9.3e-05	23.4	1.4	1	23	559	581	559	581	0.99
12	12	0.00027	0.025	15.8	0.4	1	23	587	609	587	609	0.98

Sequence Information

Coding Sequence: atgAGTTCGATACTGCATAAATCTGAGATAAAAATCGAAGAAGTTTGTCGTACGTGCCTGTCTAAGGAAATAGAGCTGCATTCAGTGTTCGAGGCGTGCCGGGGAGCCGCCACCCTCGACCACGTTATTACGACTATAACTGGATTAAAGATTGAAAGTGGAGATGGGTTGCCGGCGACAGTGTGTCGCGAGTGCAAGGAGCGGGCCACGACTGCGTTCGACTTCAGAAGCAGAGCGCTAGAGGCCGAGGAGGCGCTGCGGGGACTGCTTGTGAAAATAGAAGAGGTCCCCGTGGAGCATGTTCCCTTTGAGTCATCTCATTTGGACGTGAAAATCGAAGAGCTTTCAACTGACACAGCTGATGACTTCTTGGACTCGGAGTTCAATCAGCCTCTTACAAATGGGAGCGAGCCAGTTACTGAATTGGCGGAGGGCGTGGCGGCGGACGGCACGTACTGCCCGGCGTGCGGCGCCAGCTTCGCGGACGCGGCGGGGCTCACGCGCCACGTGTGGCGGCGCCACGCCGACCTCATGCCGCCCAAGAAGCGCGGCCGACCCAAGCAACTGCTCACCGGTGCGGTGGCGCGCGCGCTGTCGGAGAAGGGGCGGCGCGTGGCGGGCGCGCGGCCGGCGTGCGCGCTGTGCCGCGCGCGCCCGCCCGACCGCGCCGCGCTGCACGAACACATGCACAAGCACAGGGATGAAAAAGTGTTGAGCTGCCTGCAGTGCAAGAAGATGTACTTACAACGGAAGGACTTCGACCGGCACCGGTGCGGCGGCCCGGACGCGGAGACTCAACAAGAAAACGAGCCGCCCGACGGGCAGACGGACAGGAAGCAGCAGAGGTTCGCCGTGGAAATATTGCTGCAGGACTTCTTGCTGCAGAACCAAGACGCGGAGGGCGAGGGCGAGGGCGAGTGCGCGGTAGAGGTGTGCGGCGCGTGCGGCGGCGTGTTCGCGTCGGCGGCGGCGCTGGCCCGCCACCGCGACGCCGACCACCCCGACCAGTCGCTGCGCTGCGGACACTGCCACAAGGTGTTCCTGTCgctgcgcggcgcggcgcggcacCGCGGCGCGTGCGCGCTGGTGGAGCGCTCGCACGCGTGCGCCACGTGCGGCGCGCGGTTCGCGCACGCCATCTCGCTCAACAAGCACATCCTGCGCCTGCACGCCGGCCAGGCCGTCAGCGTCGCGCCGCCGCACCGCCACCGCTGCGACACCTGCCGCAGGACATTCTGCAGGAAGGAGCTGCTGCTGAAGCACGCCAAGGTGCACGCAGCGGGCGAGAAGTGCTTCGAGTGCGACGTCTGCAACAAGAAGTTCCACCGGAGGAACAATCTGAGATCTCACCTGCGCACGCACGAGCGCGGCGCGTCGGGCGGTGCGTCGGGCGGTGGttcgggcggcgcggcggcgagcGCGTGCCTGTGCCTGTACTGCGGCCGCGGCTTCTCCAACTCCTCCAACCTCATCGTGCACATGCGCCGCCACACCGGCGAGAAGCCCTACAAGTGCGACTTTTGCGGGAAAGGCTTCCCGCGCTCGTCGGACCTGCAGTGCCACCGGCGCTCGCACACCGGCGAGAAGCCCTGCGTCTGCGGCGTCTGTGGGAAAGGTTTCTCCCGCAGCAACAAGCTGTCGCGGCACATGCGCGTGCACACGGGGCTGAAGCCGTACAAGTGCACGTACTGCGAGCGCGCCTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGCCACACCGGCGACAAGCCGTACGTGTGCGAGCTGTGCGGGGAGAGGTTCATACAGGGCACCGCGTTGCACAACCACCGCCGCGCGCACGGCCACTaccccgccgcgccgccgcacgcgcacgcgcacgcgctCGCCGGCGACGCGACCGCGCCCGCCGCACTACACGCGCATGCGCACGCTCACACCCTGCCATACGCCGCCACCGCCTCCGCCTCCGTGCCCGCTCCCGCGCCCGCGCCGACGATCGCCAACTGA
Protein Sequence: MSSILHKSEIKIEEVCRTCLSKEIELHSVFEACRGAATLDHVITTITGLKIESGDGLPATVCRECKERATTAFDFRSRALEAEEALRGLLVKIEEVPVEHVPFESSHLDVKIEELSTDTADDFLDSEFNQPLTNGSEPVTELAEGVAADGTYCPACGASFADAAGLTRHVWRRHADLMPPKKRGRPKQLLTGAVARALSEKGRRVAGARPACALCRARPPDRAALHEHMHKHRDEKVLSCLQCKKMYLQRKDFDRHRCGGPDAETQQENEPPDGQTDRKQQRFAVEILLQDFLLQNQDAEGEGEGECAVEVCGACGGVFASAAALARHRDADHPDQSLRCGHCHKVFLSLRGAARHRGACALVERSHACATCGARFAHAISLNKHILRLHAGQAVSVAPPHRHRCDTCRRTFCRKELLLKHAKVHAAGEKCFECDVCNKKFHRRNNLRSHLRTHERGASGGASGGGSGGAAASACLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCVCGVCGKGFSRSNKLSRHMRVHTGLKPYKCTYCERAFSQSNDLTLHVRRHTGDKPYVCELCGERFIQGTALHNHRRAHGHYPAAPPHAHAHALAGDATAPAALHAHAHAHTLPYAATASASVPAPAPAPTIAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359945;
90% Identity: iTF_01359945;
80% Identity: iTF_01359945;