Basic Information

Insect: Spicauda simplicius
Gene Symbol: Zfpm1
Assembly: GCA_949699795.1
Location: OX453070.1:20300766-20302208[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.6e-05 0.0078 17.4 0.0 2 23 154 175 153 175 0.97

2 11 0.00023 0.021 16.0 1.7 1 23 181 204 181 204 0.96

3 11 7.8e-05 0.0071 17.5 0.4 1 23 211 233 211 233 0.98

4 11 2.4e-06 0.00022 22.3 1.3 1 23 239 261 239 261 0.99

5 11 3.8e-05 0.0035 18.5 0.4 1 23 267 289 267 289 0.97

6 11 0.0042 0.38 12.1 0.6 1 23 295 317 295 317 0.94

7 11 4.7e-06 0.00043 21.3 0.6 3 23 325 346 324 346 0.97

8 11 0.0025 0.23 12.8 0.8 2 23 352 370 351 370 0.84

9 11 0.0035 0.32 12.3 1.9 1 23 376 399 376 399 0.94

10 11 0.0064 0.58 11.5 0.5 1 23 405 430 405 430 0.95

11 11 5.4e-06 0.0005 21.1 1.9 1 23 436 459 436 459 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.6e-05	0.0078	17.4	0.0	2	23	154	175	153	175	0.97
2	11	0.00023	0.021	16.0	1.7	1	23	181	204	181	204	0.96
3	11	7.8e-05	0.0071	17.5	0.4	1	23	211	233	211	233	0.98
4	11	2.4e-06	0.00022	22.3	1.3	1	23	239	261	239	261	0.99
5	11	3.8e-05	0.0035	18.5	0.4	1	23	267	289	267	289	0.97
6	11	0.0042	0.38	12.1	0.6	1	23	295	317	295	317	0.94
7	11	4.7e-06	0.00043	21.3	0.6	3	23	325	346	324	346	0.97
8	11	0.0025	0.23	12.8	0.8	2	23	352	370	351	370	0.84
9	11	0.0035	0.32	12.3	1.9	1	23	376	399	376	399	0.94
10	11	0.0064	0.58	11.5	0.5	1	23	405	430	405	430	0.95
11	11	5.4e-06	0.0005	21.1	1.9	1	23	436	459	436	459	0.98

Sequence Information

Coding Sequence: ATGGATCCCTCAATATGCAGAATTTGCTTGTCGAGAATTGGTACAATATCAGTTTTCAATAAAGGAAGTGACAATATTCAACACAGCATGAAAATTATGCAGCTTGTTACGGTGACCATAACTGAAGACGACGGGCTCCCAAGCCTGCTGTGCGAAGGCTGTGTGGACGAGCTATGCGCTTGCTACCAGTTTGTTATGAAATGCGAAGCTTCTGACAAAGCGTTACGATGTTTTTCTGGGAGCCGGTACTGCAATGCTCAAACTAAAGAAGATAACGATATTAAGACCGATTTCGACTCACCCGATTACCATAATGACTTCCTATTGGATAATTCACCGAAAAATTCTACCGAAGACATTAGCAATAGTGACGTACAACCTACCGCTCCAAAAAGGCGCAAAAAGATGACTACGGGCAGCAAGAAAACAAAAATGGGTAGAAATAAAATCGGACCAGTGCAATGTGTTATATGTGGGCTCGTAGCCACCAGCCCTTCAGCACTGGAGACCCACATTCGCATCCACACCGGCGAAAAACCTTTCTCCTGCGAGGTTTGCAAGTCTCCATTTCGGACTCGAGGCTCCCTGAAGAGACACTTCGAAACGTTTCATTCAAAAAGGGAACGCAAATTCATTTGCGAGATGTGCGGAAACAGTTTTTATAGGAAAAATGATATCATAACTCATCTAAGAGTTCATACGGGAGAGCAGCCCTATGTATGTCAGTATTGTCCAAAGAAGTTTAGGCAAATTGCCTCAATGATCAGGCACCGGCGCACACACACTGGAGAGAAACCATATGCCTGCTCCACATGTGGGAGGAAGTTTGCTGACAGTAACCTAGTCCGGAAACACCAAAGTGTGCATAGTGATGAGAGGAACTTTCAATGCCACTTATGCCCCAAGTTGCTGAAGAGTCGTACTGCTCTAAATGTACACGTAGGTCTCCACACTAAGGGAAAGCAGAACTTTTGCACCATATGTGGTATGTCTTTCAACATGAAAGGGAATCTACAAACTCATATAAAGAGAGTTCATTCAGAAAAGTCTGGGAAATGTTCCATATGTTTAAAGACATTCTCAGATTTGGAGGTGCACATGAGAAAACATACAGGAGAAAAGCCTTTTGTGTGTGAAATATGTAACGCTGCCTTTGCTCTGAAGCGCTGCCTGGCCCACCACATGCTATTTAAACATGAGAATTCTGctaaatttaaatgttcaatAGGAGAATGCACCAAAACATTTCCAACTGCTACTATGCTGGAGTTCCATCTGTTGAAACAGCACACTAACCACACTCCATATGTATGTCAGCATTGTTCTAGAGGATTCTTCAGAGCCAGCGACCTCTCCCGTCACCTAAGAATAAGCCACATGGACGTACCCAAGACACCTTTGAAGTCATTGACTCTAAAATTAGAGGAAACTCAGTTTACGTGA
Protein Sequence: MDPSICRICLSRIGTISVFNKGSDNIQHSMKIMQLVTVTITEDDGLPSLLCEGCVDELCACYQFVMKCEASDKALRCFSGSRYCNAQTKEDNDIKTDFDSPDYHNDFLLDNSPKNSTEDISNSDVQPTAPKRRKKMTTGSKKTKMGRNKIGPVQCVICGLVATSPSALETHIRIHTGEKPFSCEVCKSPFRTRGSLKRHFETFHSKRERKFICEMCGNSFYRKNDIITHLRVHTGEQPYVCQYCPKKFRQIASMIRHRRTHTGEKPYACSTCGRKFADSNLVRKHQSVHSDERNFQCHLCPKLLKSRTALNVHVGLHTKGKQNFCTICGMSFNMKGNLQTHIKRVHSEKSGKCSICLKTFSDLEVHMRKHTGEKPFVCEICNAAFALKRCLAHHMLFKHENSAKFKCSIGECTKTFPTATMLEFHLLKQHTNHTPYVCQHCSRGFFRASDLSRHLRISHMDVPKTPLKSLTLKLEETQFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00288239;
90% Identity: iTF_00288239;
80% Identity: -