Ssim015257.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- -
- Assembly
- GCA_949699795.1
- Location
- OX453069.1:4101207-4109738[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 39 3.4 3.1e+02 2.9 0.5 3 23 92 114 91 114 0.88 2 39 0.033 3 9.2 0.4 1 23 128 152 128 152 0.96 3 39 2.1 1.9e+02 3.6 0.2 1 23 191 215 191 215 0.93 4 39 2.4 2.2e+02 3.4 0.1 3 23 224 246 223 246 0.93 5 39 0.0047 0.42 11.9 0.8 3 20 254 271 252 273 0.92 6 39 0.0016 0.15 13.4 1.3 1 23 282 304 282 304 0.97 7 39 0.0051 0.46 11.8 0.1 1 23 308 331 308 331 0.96 8 39 0.012 1.1 10.6 0.5 1 23 361 384 361 384 0.95 9 39 0.012 1.1 10.6 0.5 1 23 414 437 414 437 0.95 10 39 0.012 1.1 10.6 0.5 1 23 467 490 467 490 0.95 11 39 0.012 1.1 10.6 0.5 1 23 520 543 520 543 0.95 12 39 0.012 1.1 10.6 0.5 1 23 573 596 573 596 0.95 13 39 0.012 1.1 10.6 0.5 1 23 626 649 626 649 0.95 14 39 0.012 1.1 10.6 0.5 1 23 679 702 679 702 0.95 15 39 0.012 1.1 10.6 0.5 1 23 732 755 732 755 0.95 16 39 0.012 1.1 10.6 0.5 1 23 785 808 785 808 0.95 17 39 0.012 1.1 10.6 0.5 1 23 838 861 838 861 0.95 18 39 0.012 1.1 10.6 0.5 1 23 891 914 891 914 0.95 19 39 0.012 1.1 10.6 0.5 1 23 944 967 944 967 0.95 20 39 0.012 1.1 10.6 0.5 1 23 994 1017 994 1017 0.95 21 39 0.012 1.1 10.6 0.5 1 23 1047 1070 1047 1070 0.95 22 39 0.012 1.1 10.6 0.5 1 23 1100 1123 1100 1123 0.95 23 39 0.012 1.1 10.6 0.5 1 23 1153 1176 1153 1176 0.95 24 39 0.012 1.1 10.6 0.5 1 23 1206 1229 1206 1229 0.95 25 39 0.012 1.1 10.6 0.5 1 23 1259 1282 1259 1282 0.95 26 39 0.012 1.1 10.6 0.5 1 23 1312 1335 1312 1335 0.95 27 39 0.012 1.1 10.6 0.5 1 23 1365 1388 1365 1388 0.95 28 39 0.012 1.1 10.6 0.5 1 23 1418 1441 1418 1441 0.95 29 39 0.012 1.1 10.6 0.5 1 23 1471 1494 1471 1494 0.95 30 39 0.012 1.1 10.6 0.5 1 23 1524 1547 1524 1547 0.95 31 39 0.012 1.1 10.6 0.5 1 23 1577 1600 1577 1600 0.95 32 39 0.012 1.1 10.6 0.5 1 23 1630 1653 1630 1653 0.95 33 39 0.012 1.1 10.6 0.5 1 23 1683 1706 1683 1706 0.95 34 39 0.012 1.1 10.6 0.5 1 23 1736 1759 1736 1759 0.95 35 39 0.012 1.1 10.6 0.5 1 23 1789 1812 1789 1812 0.95 36 39 0.012 1.1 10.6 0.5 1 23 1842 1865 1842 1865 0.95 37 39 0.012 1.1 10.6 0.5 1 23 1895 1918 1895 1918 0.95 38 39 0.012 1.1 10.6 0.5 1 23 1948 1971 1948 1971 0.95 39 39 0.012 1.1 10.6 0.5 1 23 2001 2024 2001 2024 0.95
Sequence Information
- Coding Sequence
- ATGGCAGAAGTCGAAGAAGAGGTGAGGCCAGCGAAAGCGAAGCTTATCCGTTGTGTGGACTGGCTTCAGAAACAGAACGAGTTGGAGCCGAAGAAGTTGTCGTTGcagaataaaaatgatattcaGTTCATAATCGAGTGTAATGCACAGCGGAAGAAATTCCTATTATCGGTCGCGGAGAACGACAGTGTCCCCGCCGGAGTGGATGAGCCTCCTGTAGAACCTTTAAAAGTGCCCTTGCATCGGCTTCGTGTTGACTGTCTGCGCATGCTGTGTGAGTGGCAAGATTGCCAGTGCTACTTTGTGGATTATGAACTGTTTCAGAAACATGTTGTAGACCACACCTCAGTGGAAGTGAATGAGGGGGATGAAACTGTTAAATATACCTGTCTCTGGGACATATGCGGTTTCAATACGtcaaattttgatgaaatgtTGCGTCACATGAACTACCACGCGTACCATGCAAAATTAATGTCTATCGGCTTTAATGGAAGAGCTACGTTGAATTTGGAGAGGTGCAAGAAGGACTCTAGTAAAAGAAATAGCATACCACCCTTGAAGGCCGAGTTTGTTTGCATGTGGACAGGTTGCTCTGAACAATTTAACTCTATTCAGGCGTTTTTCGACCACGTGAAAATTCATATCCACTTCAATGACGAGAAGATGTGTTCGTGGGCGGGTTGCGGTGACAAGTTTCCGCGACGGGTGATCCTTACCACACATGTCCGTTCGCACACCGGTGAGAGCCTCATCGCGTGCTACCACTGCGGACGACACTTCGCCAGCAACAGGAAGCTCAGGGACCATCTGGCTAGACAGAACGTGCGCGCCGACCGCGGCCACCAGTGCAACGTGTGCGGGCAGTACTACGCCACCGCGTACCTGCTGCGCGAACACAACCGGCAGCACGTCTGCGCGTACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTACAGGTGTGTGTGTGCAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCTacaggtgtgtgtgtgtagtgtgtgcAGTGTCTGTAGTCTCGCACGCGTGCCACCTGTGCGACATGTCCGCCACGTCGCCCGCCGCGCTCGCCAACCACGTGCGCTACCGGCACGTGGCCGGCGACGGCGCGCGCTGCCACGCCTGCGCGCTCTGCCCCtacaggtgtgtgtgtgtgtag
- Protein Sequence
- MAEVEEEVRPAKAKLIRCVDWLQKQNELEPKKLSLQNKNDIQFIIECNAQRKKFLLSVAENDSVPAGVDEPPVEPLKVPLHRLRVDCLRMLCEWQDCQCYFVDYELFQKHVVDHTSVEVNEGDETVKYTCLWDICGFNTSNFDEMLRHMNYHAYHAKLMSIGFNGRATLNLERCKKDSSKRNSIPPLKAEFVCMWTGCSEQFNSIQAFFDHVKIHIHFNDEKMCSWAGCGDKFPRRVILTTHVRSHTGESLIACYHCGRHFASNRKLRDHLARQNVRADRGHQCNVCGQYYATAYLLREHNRQHVCAYACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCVVCAVSVVSHACHLCDMSATSPAALANHVRYRHVAGDGARCHACALCPYRCVCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -