Ssim016326.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- RCOR3
- Assembly
- GCA_949699795.1
- Location
- OX453070.1:13840145-13847376[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 1.7e-06 28.8 0.0 3 46 132 175 130 175 0.97 2 2 4.4e-10 6.9e-07 30.1 0.0 3 46 398 441 396 441 0.96
Sequence Information
- Coding Sequence
- ATGGTTTTGGCCGAAAGAAGTAATGATGTACGAAACGGGAAGCGGTCGAGAGGGCCAAGCCCCAATGGCCATGGAAGCCCTGATTCGAGTTCTGAAGATGAAAACGTAGTGCCATTTGCAGCCGAGAAAATAAGAGTCGGTCGAGATTATCAGGCTGTGTGTCCTGAATTGGAGCCAGTGGAGCAGAGGAAGCCAGATTTGATATCTGACAGAGCGCTGCTTGTGTGGTCACCCACATCTGACATATTAGATTCTAAACtTGATGAATACATAACAACTGCTAAAGAAAAATATGGTTACAATGGAGAACAAGCACTAGGAATGTTGTTTTGGCATAAACATGATCTTAATCGGGCATCCATGGACCTGGCCAACTTTACTCCTTTTCCTGATGAATGGACCGTTGAGGACAAAGTGCTGTTTGAGCAAGCATTTCAATTCCATGGCAAAAGCTTTCATAGAATAAGACAAATGTTACCTGATAAATCCATAGCGTCACTggtaaaatattactattcaTGGAAAAAAACCAGAGCTCGTACCTCACTGATGGATGCTGTTGGTGAAGGTCGAAATGCGGCAGGGTCAGGTACTGGCAAGAGGGAATCTGGAGTAGGGTCTGAGCCAGGTGGCTCAGACAAGGAGTCTGATAATGATGAGAAGAAGTGGACTATCCACCGCGGCATAGTCCGCGGCGGGAAGGccgcggcggcgggcgggccCTCGCTGCGCGCCGGCCAGCAGAGCGAGGGCGAAGGCGGCGGCGAGGCGAGGTGCACTGTGTGCGGCATTCTGTGCAACCAAACGACGCAACACAACTCGCAGAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACCGGCACGATGCGACCGCTCTGCGGACCGTCCGGGAGACGCGGGCCAGGCTCCAAAAACCAACGGTACAAGCATCGGCTGCCGCGTGGCATTTACATCAATCACGACGATCTCGTCGCCATGGCCACTGGGCCTCAGCCCGGCGACCCTCCGCAGCCCGGCCTTATCAATCTGGGCGAAGCCATACTCAAATCAATGGATAGAGAAATTATATCTCTCAAGAGACAAGTTCAACATAATAAGCAACAGTTGAGTGCGATGAAACGCAAGGTTGGCGACTCAGGTGTGGAGGAGTTCCGGCCCGGCGAGCCGCCCGCTAAAGTGAACTCTCGCTGGAGCAATGAGGAAATACTTATGGCAGTCACGGCCGTTAGGAAATATGGCAAGGATTTCCAAGCTATCGCCGAGACACTAGGTACGAAAAATGAAGGTCACGTACGCACTTTCTTCGTGTCCTATCGGCGACGGTATAATTTGGACGCCGTGGTGCGTGAACATGAAGCGGACCGCGGGAACGCTAACCATGTTCAGGCTGGTACAGCAAGTGGTGAAACTACGGAGAATGATGGTGATAATACCAATAATACAAGTGCCACAACACAAAATACCAACAAAGAGGATAAAATGGAGGTGGACAGCGAGGGCGTGGCTATCGGCACGTCGGCGGAGCAGGGCGGCGCGCCCACGACGCCGCCCAAGCAGAAGGCCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVEQRKPDLISDRALLVWSPTSDILDSKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDAVGEGRNAAGSGTGKRESGVGSEPGGSDKESDNDEKKWTIHRGIVRGGKAAAAGGPSLRAGQQSEGEGGGEARCTVCGILCNQTTQHNSQKLCQACLVHARRTGTMRPLCGPSGRRGPGSKNQRYKHRLPRGIYINHDDLVAMATGPQPGDPPQPGLINLGEAILKSMDREIISLKRQVQHNKQQLSAMKRKVGDSGVEEFRPGEPPAKVNSRWSNEEILMAVTAVRKYGKDFQAIAETLGTKNEGHVRTFFVSYRRRYNLDAVVREHEADRGNANHVQAGTASGETTENDGDNTNNTSATTQNTNKEDKMEVDSEGVAIGTSAEQGGAPTTPPKQKAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00795655;
- 90% Identity
- iTF_00277299;
- 80% Identity
- -