Basic Information

Insect: Spicauda simplicius
Gene Symbol: -
Assembly: GCA_949699795.1
Location: OX453066.1:21862208-21864058[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.8e-09 2.9e-06 27.6 0.0 2 41 12 51 11 54 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.8e-09	2.9e-06	27.6	0.0	2	41	12	51	11	54	0.91

Sequence Information

Coding Sequence: ATGGCAAAACGTGGCGAATATTATGCATGGAATGAAGAAAGTATGAAACTGGCATTACAAGCCTTAATCAAACAAGAAGCTGGTCTAAATGAGGCAAGCAGGATATATGGTGTACCAAAGGCGACACTGAAGCGAAGATTTGACGACAAAAATTCAAAGGCTAAAGGAGAAAAGCAAATAATTGGTTCGACTGGTGATCTTACTCCTGATTTGGAAAATAAATTAGTTGATCATATTTTGGAATTAGAAGGTTGTTTGTATGGAATTACACCAAAAGATGTTAGAAGTTTAGCTTTCAAAATTGctgaaaaaaatggtttaaagcACAGATTTAACAAAGATAAAGAAACGGCTGGAAAAAAGTGGTACTACGGTTTTTTAAAGAGACATCCCGAATTAAGTTTAAGACAACCTAGGGCAACTTCTTTTAATAGAGCTACAGCATTTAACAAGCCAACagtgaaagatttttttgagAAGTTAGAGAAAATTATGAACGAAAATAACATAAACGACCCgagatacatttttaatgttgaTGAGACAGGGCTCACGACAGTTCAAAGAAAGCCGAGAAAAGTCTTGGCGCAGAAAGGCAAACATCAAGTAGGTTCCGTAACTAGTGGCGAACGTGGTACCACTACAACAGCCGTATGTTGCGCTAGTGCAGCTGGATATTTTATCCCCCcgcttataatttttaaacgaaaaaGAGCCAAAGATGAACTACAAGATGGAGCGCCACCTGGCACAATTTTTGCATTCAACCCAGAGAGTGGCTATATAAACAAGGAAATATTTTTCGTCTGGATGCAACATTTCGTAGAAAGTGTGAAACCAACGCCCGCAAAGAAAGTTCTTTTAATACTTGATGGGCATACGAGCCATACCAAAAATTTAGATGCCATTAATTATGCTAAAGATCACAATGTTGTCCTATTATCACTTCCTGCTCACACTTCAAATAAATTGCAGCCACTGGACACCTCTTTTTTCAAGCCTTTGAGCTGCTATTTTATAGATGAGACCGAAAGATGGCTGCGCTCTCATCCTGGGCGATGCGTCACAGCATTTCAAATCTCAATGCTATTTGGAAAAGCATATGCCCGAGCAGCGTCCGTAGGAACTGCAGCAAATGGATTTAAGAAAAGTGGTATTTGGCCactaaataaagatatatttcaaGACTATGAATTTATAACACTAGCAGAAGATGAAAACCCTCTGATTgaaaataacgaaaatattgatattgatcCTTTATCATTGACGACAAGCACCCAACCAGCTACTCTCAATATCCAACCAGCTATTCCCAACATTCAACTCTCTTCTCAAATGATGCGAAGTCATAACCACCCCGGTGCAAGCAGTAGTTCTGAACATCAAATTGAATTCGTAACGCAGCCTCTTGTCTGTTCAAACTCTAGTGATCTGAAATCAACAAGCACCGCTCATTTAGAATCAATTTCAAGTAAAGAGCCCGTTCAAAGCAATAGCGCTGATTTCCAAATTGCTAGTATTTCTCCTGGAGTGAAAAAGGTTATTGAAGAATTGCGACAAAGAAGCCGTAAACCACAACGTGCATTGGAGTTAACGTCATCTCCATACAAAAGGGAATTAGAGAGAGCAAAAGCTAAGACAAATAAAGCAAAACCTGAAAGAGTGAAGAAATCTGTAAACGTAAAAAAGGTTAATGAAGATGAAGTTAAAAAGTGGTTTTGTAAGATTTGTCTGCTGTGCTCTATAGAAGATATGATACAGTGCTTAGCGTGTAAAGGTTGGGTGCATGAAGAGTGTGCCTGTGTGAAAAAAGGGATAAAGAGATATTTTTGTCCAACATGTCGCTGA
Protein Sequence: MAKRGEYYAWNEESMKLALQALIKQEAGLNEASRIYGVPKATLKRRFDDKNSKAKGEKQIIGSTGDLTPDLENKLVDHILELEGCLYGITPKDVRSLAFKIAEKNGLKHRFNKDKETAGKKWYYGFLKRHPELSLRQPRATSFNRATAFNKPTVKDFFEKLEKIMNENNINDPRYIFNVDETGLTTVQRKPRKVLAQKGKHQVGSVTSGERGTTTTAVCCASAAGYFIPPLIIFKRKRAKDELQDGAPPGTIFAFNPESGYINKEIFFVWMQHFVESVKPTPAKKVLLILDGHTSHTKNLDAINYAKDHNVVLLSLPAHTSNKLQPLDTSFFKPLSCYFIDETERWLRSHPGRCVTAFQISMLFGKAYARAASVGTAANGFKKSGIWPLNKDIFQDYEFITLAEDENPLIENNENIDIDPLSLTTSTQPATLNIQPAIPNIQLSSQMMRSHNHPGASSSSEHQIEFVTQPLVCSNSSDLKSTSTAHLESISSKEPVQSNSADFQIASISPGVKKVIEELRQRSRKPQRALELTSSPYKRELERAKAKTNKAKPERVKKSVNVKKVNEDEVKKWFCKICLLCSIEDMIQCLACKGWVHEECACVKKGIKRYFCPTCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359681;
90% Identity: iTF_01359681;
80% Identity: iTF_01359679;