Ssim014822.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- kn
- Assembly
- GCA_949699795.1
- Location
- OX453068.1:14222634-14244742[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-53 1.2e-49 169.9 0.0 11 135 137 251 128 255 0.93
Sequence Information
- Coding Sequence
- ATGATCGCGGTTACAAGAACTAGTGGCGCCATCGGTGGCAGTCGCGTCGTCCCGCTCTTGAGGCGAGGGCGTGTCCCAAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGGTTCGGAGCCCGAGCACTCCGCGGCGCGCTCCCGCGACGCTTCTGTCGATCGCGTTCGTGCGTTCTCGGGCGCCTGGTCGGGCGGTCGGCCGCGGGCGCGATTCGGTCGGACGAGTTAaacgcggcggcgggcgggtATACTGGCTCGCCGTGGCCGCCGCTCGAGCTAGACCCCGTGGGATGGGGCCGGAAACTGTACCCGTCTGGCGCGCCGAGGTCCTCAGgCGGACTTATGTTCGGCCTGCACCACCAGGAAGCGGCGGGGGTGCACGCACAGCCCCGCGGGCCGGTCACCTCCCTCAAAGAAGAGCCCCTAACGAGGGCTTGGATGACCCCCAGCTCGCTAGTTGATAATACCAATAGCGTGGGCGTGGGCCGCGCGCACTTCGAGAAGCAGCCGCCCAGCAACCTGCGCAAGAGCAACTTTTTTCATTTCGTGGTGGCGCTGTACGACCGCGCCGGCCAGCCAGTGGAGATCGAGCGGACCGCCTTCATCGGATTCATTGAGAAGGACCAGGAAGCAGAGGGGCAGAAGACGAATAACGGCATCCAGTACCGACTACAACTGCTTTATGCAAATGGTATTCGACAAGAGCAAGATATCTTCGTTCGGCTAATTGACTCCGTTACGAAACAGGTGAGCTGCCCTAAAACGTACTGA
- Protein Sequence
- MIAVTRTSGAIGGSRVVPLLRRGRVPRAPPTVRGDGRGFGARALRGALPRRFCRSRSCVLGRLVGRSAAGAIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVSCPKTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796312;
- 90% Identity
- iTF_00287848;
- 80% Identity
- -