Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949699795.1
Location
OX453081.1:859249-905353[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-24 4.4e-21 75.8 0.0 2 89 107 190 106 190 0.93
2 2 7 2.4e+04 -3.5 0.0 45 63 1295 1314 1283 1324 0.71

Sequence Information

Coding Sequence
ATGCAAATTTTCTCAAAGATGGGAAAATGTGACGAAAATAATGTGCAAGTGAATATGGGGGACTCGGCGTCCCCCATGAAACCAGACAATTTCTCGTTTACCGTGCCCCCGGAGGCCCCGGTGTTCGAGCCCACCCCGGAAGAGTTCCTGGATCCGCTAGCGTACATCAGCAAAATAAGACCCATCGCTGAGAAGTCGGGAATATGCAAGATAAAACCCCCCGCGCATTGGCAGCCTCCGTTCGCTGTGGACGTGGACCGGCTCCGGTTCACGCCTCGGATACAGCGTCTCAACGAGCTAGAGGCAATAACTCGTGTGAAGTTGAACTTCCTGGATCAGATTATCAAGTTTTGGGAGCTCCAAGGTTCCGTACTCAAGATACCGACCGTTGAAAGGAAACCCCTAGATCTGTATGCCCTACATAAGATCGTTAAGGAAGCAGGTGGTTTCGAGGTATGCTCAGCGGAGCGCAAATGGTCGAAGATAGCCCGTCGGATGGGTCACCCCCAGGGCAAGGGGATCGGCTCCATCCTGAAGAACCACTACGAGAGGATCCTGTACCCGTACGACGTATTCAAGAACAACGGTGCCGTTGGAGACAATAAGGAGACGAAAATCGAAGTGAAAGGCGAACAAACTCCAGAGAAGAACAATGGAGCGAGGAGTCGGTCGTCTAGCAAGCCATCGGCGGCGACTCCGCCCCCCGCGCGCAGGTACAAGAGCTCGGAGCCCGAGGCCGCTGAGGGGAGCCAGTCAGAGGGCGCTATGTCGGGGTTCGATGAGAAAAAGACGCCGATTAAGGAGGAACCTGGAGAGACTAGGCGAAGTCCGCGCGAGAACAAGTGGATGTCAACAGCGGGCAGTTGCGGCGCGCGCGCCCGCGTGTTGCGCTCCACGCGGCTCCGCGAGCACCGCATGAGCAACATGACGGTGTCCGTCACGCCGGCGCCGCACGCGCCCGCGCACGTACCGCATCCCGACGACCCGCTCGCCAAGTACATGTGCCACGTGTGCGGGCGCGGGGACATCGAGGAGCAGATGCTACTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTGGTGCCCCCCCTCGCTGACGTGCCGAAGGGTGACTGGCGGTGTCCGGTGTGTCTGGCTGAGGAGGTATCAAAACCGGCAGAGGCGTTCGGCTTTGAACAAGCGTCGCGCGAATACACCCTGCAACAGTTCGGCGAGATGGCTGACCAGTTCAAATCGGACTACTTCAACATGCCAGTACATaTGGTCCCAACGTCAACTGTAGAAAAGGAATTTTGGCGCGTCGTGTCCTCAATAGACGAGGACGTCACAGTGGAATACGGCGCCGATTTGCACTCCATGGACCACGGCTCAGGTTTCCCGACTAAGTCGAGCGCTCACCTATATCCCGGGGAGCAGCAGTATGCGGAGTCGAGCTGGAATTTGAACAACCTTCCCGTATTAGAAGGCTCAGTTTTGGGACATATCAACGCTGATATATCTGGCATGAAGGTGCCGTGGTTATACGTGGGTATGTGCTTCGCGACCTTCTGCTGGCACAACGAGGACCACTGGTCATACTCGATCAATTACTTGCACTGGGGCGAACCCAAGACTTGGTACGGCGTCCCCAGCTCGAAGGCGGAGCAGTTCGAGGCGGCGATGAAGGCGGAGGCGCCCGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCACCAGCTGGTCACCATCATGAACCCCAACGTGCTGATGAAGGCTGGCGTGCCTGTGTACAGAACGGACCAACACGCCGGAGAATTCGTGATAACTTTCCCTCGCGCCTACCACGCCGGTTTCAACCAGGGTTACAACTTTGCTGAAGCGGTCAACTTTACTCCCGCCGATTGGTTGAAAATGGGCCGCGAGTGCATCGCCCACTACTCGACGCTGCGTCGCTACTGCGTGTTCTCGCACGACGAGCTCGTGTGCAAGATGGCACTCGACGCGGACTCGCTGAGCCTCACCGTCGCGCTGGCGGCCTACAGGGACATGCGGGCGATGCTGCACGAGGAGAGGAAGCTGAGGAAGGCGCTGTTGGACTGGGGCGTGACAGAAGCGGAACGCGAGGCGTTCGAGCTGTTACCAGACGACTCGCGGCAGTGCCAGCTGTGCAAGACGACGTGTTTCCTGTCGTGCGTGACGTGCGCGTGCACGCCGCACGTGGTGTGTCTGCGGCACTCGCACGAGCTGTGCGCGTGCGCACCCGCCAGGCACAAGCTGAGATACCGTTACACCCTAGACGAGCTTCCGGCAATGTTAGACCGTCTCAAACGCAAGTCTGAGCAGTTCCGCGAGTGGGCGGAGGCTGTACAAAACGCCCTTGACCCTGACACGCCCAAGACGTGCGACCTGGATGGACTCAGGGCGCATTTGAAGAAGGCTCATGATCTTAAGATGCACAAAACCGAGCTAGTCCGTGCGCTGGAGACGGCGATCGAGGACGCAGAGAAATGCGCGTCAGTGATCCAGCAGCTCGATCTGAACAAGATGCGCACGCGCACGCGTCACCACGACCCCAAGTACCGGCTCTCGGTCCATGAGCTGACTCTATTCGCGGCTGAGATTGACGGGCTGGCGTGTGTGTTGCCTGAAGGTTCTGCGGTGAAAGAGGTACTACGACAAACCGCTGAATTTGAAGATCGTGCCACAGAGTTACTCAGCAAAGATTTAGAAGACACAGATGCAAATTCTGTACGAGAGCTCGAGGAAGTAGTGGACCTAGGCTCTCGTCTCTGCATCGTCCTGCCGCAGCTCTCCGCGCTGCAAGCGAGGCTGCAACAAGCGCGTTTCCTGCAGTCCGTGGAGACGCACAAGGACGACTGCGCCACGCTCACCCCCGAAGTCATCGATAAGCTTCTGCAAGAGGCCGCCACCGTCGTACCGCACAGGAAGGTGGAGGCTGAAAGGGCGATGCTTTATAAACTTAAGGGTCAAGTGGCAGAATGGGAGCGTAAAGCGCGCGCGATCCTAATCGACACATCAAACCCACGACCCCGTTCCCCCACCACGGAACCGGAGGAGCAACACACCACCCTCGCGGAGGTAGAGGCCCTCCTCGCGGAGGGCGACGAGATAGAGGCGGCGCTGCCCTCCCACCACGCCCTCCACACCGCCGCCACGCACGCTAGGGACTGGCTCGCTAAGGTAGAAGACATGCAGTCAAAGGAGCTCTACCCATACATGCACAGTGTCGAGGCGCTGGTGAAGAGGGCGTCGCAAATACCCATAGCGTTGTATGAGAAGGACCAACTGGCCGCCGCCCTGGTCTCTGCCAGGGAATGGAAGAAGGGCGCCGCTGAAATGTTTCTGAAAAAGAACTGGCCCTACACGCTCCTAGAAGCGCTCTCCCCCCGCACGGAGTGCAGCGGCGCCGGTACTAGACGCCGCGGCCGGACAGCGGACACGGCGTCCCTGGAGGCGGGCACGTTGCTGCGGCACTTCAGCGAGGACGCCACTCCCACTGAGATTGTCGCCGCGTTCAAGAACGCTGAGCATCGTGAACTGGCCGCTATTAAGGAGCTCAGAGCACGTAACATGCGCAAGGAAGTCCGCGCGCCACCAAGCAGCGGCGTGACCTTCTGCGTGTGTCAGAAGCGACAGTACGGAGTCATGTCGCAGTGCGAGCTGTGCAAGGATTGGTTTCACTCGTCGTGCGTGTCCGGGCTGCGCGAGAGTCGCGAGGAGCGCGGCTCGTCGCCCGAGCCGGCCGAGCTGCCGTTCCCGTGCAGCGAGCCCAAGTTCCTGTGCCCCGACTGCACGCgcacgcgccgcccgcgcctGCACCGCATCCTCGCGCTGCTGGTATGGCTACAAAAGCTACCGGTCCGCCTGGCCGAGGGCGAAGCCCTGCAGTGCGTAACGGAGCGCGCGATGGCGTGGCAGGACGCCGCGCGAGCGCTACTCAGCAGCCCCCAATTGGCCACGTTGCCGATGCAACGCTTACCAGAGAGGAAAGACCATGGGTCCAGATCATCGGCGAGTGTGGAGCACGCGTACAGCGCCACCCCGCGGTCGCCGAGCACGCGAGTCGCACCCGGACTATTACAGAAACTGGAAGATTTGATGCTTGAAGGAGATTTATTGGAGGTTCGTCTAGAGGAGCAAGCGGCGGTGTGGGGCGCGGTgacggcggcgcgcgcggcggagGGGCGTCGCGGCGCCCGCGTGCTCGACGCCGGGCGACGCAAGCGTGCGCAGCGAGCGCCGAGGCCACACCGTCAGTTGAAGCGGACGCGACCGCCACATGGACCTACTACAACCAAGACTACGTTGAAACGTGGAGCCACAAATACCACAAATTACTTAAATAGGAAACAGGGCATGTCATCCGGGTCCGGTCTGATGATGCGCAAGCACTACATGGCGCGGCAGGAGCGTCGCAAGCGTGGGCTGGCCGCGTCCACGCGTGGGAAGCACCCGCGACAGTCTCGCCTCGCTCAAACCCGCGCCCAGAACAGTACAGCGACAAGCGGCAACGGCTCGCGGCGAGCGGGCAGCAGCAGCTCCTCCTCGCCCTCCTCCGCCGAGGACGAGGAGGactgcgccgccgccgcctgcCTACGGCCCACCGGCAAAGAAGTAGACTGGGTGCAGTGCGACGGCGGTTGCGACCAGTGGTTCCACATGCACTGCGTCGGTCTGAACCGGAACGCGCTGCGAGAAGACGACGACTACGTGTGCGGCTCGTGCGCGGAACGCCGCTGA
Protein Sequence
MQIFSKMGKCDENNVQVNMGDSASPMKPDNFSFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNNGAVGDNKETKIEVKGEQTPEKNNGARSRSSSKPSAATPPPARRYKSSEPEAAEGSQSEGAMSGFDEKKTPIKEEPGETRRSPRENKWMSTAGSCGARARVLRSTRLREHRMSNMTVSVTPAPHAPAHVPHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALDADSLSLTVALAAYRDMRAMLHEERKLRKALLDWGVTEAEREAFELLPDDSRQCQLCKTTCFLSCVTCACTPHVVCLRHSHELCACAPARHKLRYRYTLDELPAMLDRLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKKAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSVHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRATELLSKDLEDTDANSVRELEEVVDLGSRLCIVLPQLSALQARLQQARFLQSVETHKDDCATLTPEVIDKLLQEAATVVPHRKVEAERAMLYKLKGQVAEWERKARAILIDTSNPRPRSPTTEPEEQHTTLAEVEALLAEGDEIEAALPSHHALHTAATHARDWLAKVEDMQSKELYPYMHSVEALVKRASQIPIALYEKDQLAAALVSAREWKKGAAEMFLKKNWPYTLLEALSPRTECSGAGTRRRGRTADTASLEAGTLLRHFSEDATPTEIVAAFKNAEHRELAAIKELRARNMRKEVRAPPSSGVTFCVCQKRQYGVMSQCELCKDWFHSSCVSGLRESREERGSSPEPAELPFPCSEPKFLCPDCTRTRRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLSSPQLATLPMQRLPERKDHGSRSSASVEHAYSATPRSPSTRVAPGLLQKLEDLMLEGDLLEVRLEEQAAVWGAVTAARAAEGRRGARVLDAGRRKRAQRAPRPHRQLKRTRPPHGPTTTKTTLKRGATNTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLAASTRGKHPRQSRLAQTRAQNSTATSGNGSRRAGSSSSSSPSSAEDEEDCAAAACLRPTGKEVDWVQCDGGCDQWFHMHCVGLNRNALREDDDYVCGSCAERR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00960715;
90% Identity
iTF_00287841;
80% Identity
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