Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387619.1:944657-959728[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.27 22 6.3 0.9 2 21 488 507 487 511 0.88

2 11 0.0075 0.61 11.3 2.4 1 23 525 548 525 548 0.97

3 11 0.025 2.1 9.6 2.1 1 23 553 577 553 577 0.91

4 11 0.0018 0.15 13.2 0.1 2 22 628 648 627 648 0.95

5 11 3.9e-05 0.0032 18.4 0.9 1 23 706 727 706 727 0.98

6 11 0.00016 0.013 16.5 0.4 1 23 733 756 733 756 0.96

7 11 0.026 2.1 9.6 1.0 2 20 780 798 779 799 0.93

8 11 0.0046 0.38 11.9 1.1 2 23 812 835 811 835 0.96

9 11 0.51 42 5.5 6.1 1 21 842 862 842 864 0.94

10 11 0.024 2 9.7 1.2 3 21 872 890 870 895 0.92

11 11 0.056 4.6 8.5 5.0 1 23 901 924 901 924 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.27	22	6.3	0.9	2	21	488	507	487	511	0.88
2	11	0.0075	0.61	11.3	2.4	1	23	525	548	525	548	0.97
3	11	0.025	2.1	9.6	2.1	1	23	553	577	553	577	0.91
4	11	0.0018	0.15	13.2	0.1	2	22	628	648	627	648	0.95
5	11	3.9e-05	0.0032	18.4	0.9	1	23	706	727	706	727	0.98
6	11	0.00016	0.013	16.5	0.4	1	23	733	756	733	756	0.96
7	11	0.026	2.1	9.6	1.0	2	20	780	798	779	799	0.93
8	11	0.0046	0.38	11.9	1.1	2	23	812	835	811	835	0.96
9	11	0.51	42	5.5	6.1	1	21	842	862	842	864	0.94
10	11	0.024	2	9.7	1.2	3	21	872	890	870	895	0.92
11	11	0.056	4.6	8.5	5.0	1	23	901	924	901	924	0.98

Sequence Information

Coding Sequence: ATGCTGTCACCAAGAGATGATGATGACGAAGACAATCACCTCTGCATCAAATGCAACGCCACCATCATCGGCTTGGATAACTACATTAAACACCGGAGCCAGAGATGCGGCAAACTGAAGAACAACGCATCAAAACGTGGCCTGGCCCCCATAGACCCTCTCGAACCCACCTACAGCCTCGGAGCTGATGTATTCTTCCAGTCTTTAGAACTCCAGAGCAGCGTAAAAAAGACGTCCTTGGCAAGACTGACCCCACCTATTCCTTTATCAAAAGCTAGCGATAGAAAGAGTTTGATAGTAGCATCAACTTCGAGAGACATTCCTCGTATGAGTCCTCTAGAAACCAATCTAAGAGGAGAAGACTGGATAGGAGGTCACAGTCTGAGGATCGGAAGTAACGTTGACAATCAAACTAAACTTATTAATGCCGTTGCCAGTATAAGTGGTAATGTCAAAAAAGATATTCCTGCGCCTTATGCCATGTGTTATGAAGACAGTGAGGAATCTGAGGTTTCTGAAGAAGATGATGAGGAGGAGCATGCTTCTGAGGAGAAATGGAAACCACCTCCGAATTACACGGGAGGTAAGTGGAGACCAGCGTCTCCTGAACACGAAGACTGGGATATGAATGATCAAGAAAATACAGGAGAAATTATTCCTGATGGTAATGATCGGGATGATGATTATGATGCTCCACCTCCAGGGCATACCAAAGGAAAATGGGTTCCGGGTGCCAATGAGAAGACTCAAATCATGCAACCAATTATACAAAGTAAAGGATCAGTACAGTATTGGTGTGGACCTTGCAACAGGAGGTTGGGCTCACGAGCGATTTATGACAAGCATCTGCGGTCAAGTTTGCATCTGAAAAAAGTGTTACCTGAACATGAATTGGAATTTTCTGGCCATCTTGAACCCTTAAATCTAGACAAACGTCTACCACGTCCATCCAGATTCGTCAACGCTGGTATCTATTCACAAGTTCAAAGAAAACGCAAGAAATCTAATCCGAAATTGCATGTGAAAATAGAGAAGAAAAAACGAAAGCGAAAGCCGAATTATGTCCACTGTGGAGGTTGTAAATCGAGGGTTAAACAACATCTGATGGGAAAGCATCTTATATCCCATTACCATTTTCGTAAAGCACGAGAGACCAGTAGCTCTGTTTACCAACAATTGATCCTCGACAACATCGACGCTATAGTCCACCAATCGCCTTTTCAATGCAGTCCTTGCAAGTTCTACACCAACTGGCTTTCCAACTTCATGCAGCATTGGTTCTCGGAGGAACATGAAGAGAGAATGTCCATGATGGAGGGTCGGTTCTGGTGTTCTTTTTGCAAATTCGAGTGTGACTCCTCCCAAGAGATGCTGCAACACATATCCAGCTCTGATCATAGCGAAGTCATCGCTGTTATCAACAGATCCATGCCTATAATAATCAGAAAGAAGACAATTATCAAATGTTACACATGTCTGAAAGAATTTAGGTACAATATAGAAATGAAGAAACACAGCGAGAGAACGGGACATCCGCTGGCTTTAACGGGAACAGATGATTATCAGGAGCTTCATAAATGTCAACTTTGTACTGCGAAGTTCAAATCTTCGTTGACGTTAGCAGCTCATTTGAAATCCAAACATAAACAAAGAGCTTTCTTCTGTCTTGTTTGTGAGAAGAACTTCAATTCTTCGGAAGAAGCGAAACATCACCGGCAAACTTCAGAGCATAGAATTAAAAGAAAGGAGACTATGAAAGAGCAAGGAGTATTGTCCAAAGGTCTGACCAAAAAGTGTCCGTATTGTATTGATAATGTTATATTAAAGAATATTCTGGTACTTAAAGAGCATATCCGTGCTGTTCATCCTGATATCAAGAAAAAGTGCCCAAAATGCGGTATGGCCTTCATCCTGTCCCAAGAAGTGACCCGCCACATCAGATCTAACGCCTGCCAGTTCCTTCCATCCACCTCGAACGCCTCAATCTACTGGAACTGCAGCCAATGCCTCTTCACCACCGATTCTCAAGCCGAATGCTTCTTCCACGAAGTTCTACACTCAGAACCTATTCGTACCACCGCCAATGTTGGAGAAGGTGCAAAAACTATCATAAAATACATGTGTCCTCTTTGCCCGAAGAGTTTTAAGAAGGCGTCCTTACGCCAACATCTTCGACAGCATACTTTTGAGCGGCCCTTTGTGTGTGGGACTTGTGGGGCGAACTTCACGCGGCAGACGAGCTTGGCTAATCATAAAAAGAATGAACACAGTGGGAGAGTGAAGCTGCCGTCGTTGGCGCCTTCGGTAGACAGAATCCAGGCTACAAACGTGGACTGGGAATGTGGCAAGTGTTGCAAGAAGTTTTCTAGCAGATCAGCTTTGTCGCGCCACGTGGCTGGTAACTGCACGGGCGTGTCGACCAATCAAGTGCAACGCTGTCCACACGACCAGTGCAACTATGTCGCGACCACTGCCACTCAACTCGCGAGACATCGGCGTTCCCACGGCGAGCGAATAAAACACCACGAATGTAATTTGTGCACATTTAAAACGGACCAGGCGAGCCATATGAAAAGGCACATGCTTTGTCACAAAGGAATTAAACCCTACGGCTGCCCCTATTGCCAGTTTACATGTGGCAGTTTGGAAAATCTTCGTAAGCACGTACTGCGCAGTGGAAAACACAATGGCTTGTATTTGTACACTTGTCATCATTGCCAGTACCCCACAAACATGGCAACGAAGCTTCGATCACATCTCACTACGACACATGGAGATAAATACAACGCAAAAACAGCTATCGAAGCAGTCAAAACTCATCTCATGATCAACATCGCCTCCTACGACAGGCAGGGGATACCGTGGTGGAATTCTCCAAACGCCCCCAAACCACAGGGCGGGAGACGCCGGTCATTCGTCCACCCGGCGCCTCCTACGTCTCCTCTGGCGGCGGAAGGGATCTTCACGCTCCCGATCCCTCTCGGCACTCTCCTTCTGCAAAAAGACCACCTCGCAGAAGTGGGCCACCGCACGCCAGGACCTCTGGCTGCCGACCGAGTAGTTAGATACCTGCTCAACTCTTACTGCTATAGGCAATGCCATTCCAGAGAGATGTCACCAATAAATGCTCTAAGTGCCATTCACGATGACGCGCCCGATAATTTTCCTAAGCGCTTATAG
Protein Sequence: MLSPRDDDDEDNHLCIKCNATIIGLDNYIKHRSQRCGKLKNNASKRGLAPIDPLEPTYSLGADVFFQSLELQSSVKKTSLARLTPPIPLSKASDRKSLIVASTSRDIPRMSPLETNLRGEDWIGGHSLRIGSNVDNQTKLINAVASISGNVKKDIPAPYAMCYEDSEESEVSEEDDEEEHASEEKWKPPPNYTGGKWRPASPEHEDWDMNDQENTGEIIPDGNDRDDDYDAPPPGHTKGKWVPGANEKTQIMQPIIQSKGSVQYWCGPCNRRLGSRAIYDKHLRSSLHLKKVLPEHELEFSGHLEPLNLDKRLPRPSRFVNAGIYSQVQRKRKKSNPKLHVKIEKKKRKRKPNYVHCGGCKSRVKQHLMGKHLISHYHFRKARETSSSVYQQLILDNIDAIVHQSPFQCSPCKFYTNWLSNFMQHWFSEEHEERMSMMEGRFWCSFCKFECDSSQEMLQHISSSDHSEVIAVINRSMPIIIRKKTIIKCYTCLKEFRYNIEMKKHSERTGHPLALTGTDDYQELHKCQLCTAKFKSSLTLAAHLKSKHKQRAFFCLVCEKNFNSSEEAKHHRQTSEHRIKRKETMKEQGVLSKGLTKKCPYCIDNVILKNILVLKEHIRAVHPDIKKKCPKCGMAFILSQEVTRHIRSNACQFLPSTSNASIYWNCSQCLFTTDSQAECFFHEVLHSEPIRTTANVGEGAKTIIKYMCPLCPKSFKKASLRQHLRQHTFERPFVCGTCGANFTRQTSLANHKKNEHSGRVKLPSLAPSVDRIQATNVDWECGKCCKKFSSRSALSRHVAGNCTGVSTNQVQRCPHDQCNYVATTATQLARHRRSHGERIKHHECNLCTFKTDQASHMKRHMLCHKGIKPYGCPYCQFTCGSLENLRKHVLRSGKHNGLYLYTCHHCQYPTNMATKLRSHLTTTHGDKYNAKTAIEAVKTHLMINIASYDRQGIPWWNSPNAPKPQGGRRRSFVHPAPPTSPLAAEGIFTLPIPLGTLLLQKDHLAEVGHRTPGPLAADRVVRYLLNSYCYRQCHSREMSPINALSAIHDDAPDNFPKRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00859955; iTF_01430303; iTF_00859040; iTF_00341761; iTF_01010860; iTF_00064084;
90% Identity: iTF_00859955;
80% Identity: -