Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387624.1:13742118-13749679[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0009 0.074 14.2 2.9 1 23 254 276 254 276 0.99

2 12 0.036 2.9 9.1 3.7 1 23 284 307 284 307 0.94

3 12 1.4 1.2e+02 4.1 0.2 1 23 311 334 311 334 0.90

4 12 0.00012 0.01 16.9 1.9 1 23 409 431 409 431 0.99

5 12 0.00042 0.035 15.2 1.3 2 23 440 462 439 462 0.96

6 12 0.64 53 5.2 5.6 1 23 466 488 466 488 0.98

7 12 2.8e-05 0.0023 18.9 2.7 1 23 493 516 493 516 0.98

8 12 0.57 47 5.3 1.6 3 23 522 543 521 543 0.85

9 12 0.09 7.4 7.9 0.1 3 23 637 658 635 658 0.93

10 12 3e-06 0.00025 22.0 1.2 1 23 667 689 667 689 0.98

11 12 0.00066 0.054 14.6 0.8 3 23 697 717 695 717 0.96

12 12 6.4e-06 0.00053 20.9 2.0 1 23 723 746 723 746 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0009	0.074	14.2	2.9	1	23	254	276	254	276	0.99
2	12	0.036	2.9	9.1	3.7	1	23	284	307	284	307	0.94
3	12	1.4	1.2e+02	4.1	0.2	1	23	311	334	311	334	0.90
4	12	0.00012	0.01	16.9	1.9	1	23	409	431	409	431	0.99
5	12	0.00042	0.035	15.2	1.3	2	23	440	462	439	462	0.96
6	12	0.64	53	5.2	5.6	1	23	466	488	466	488	0.98
7	12	2.8e-05	0.0023	18.9	2.7	1	23	493	516	493	516	0.98
8	12	0.57	47	5.3	1.6	3	23	522	543	521	543	0.85
9	12	0.09	7.4	7.9	0.1	3	23	637	658	635	658	0.93
10	12	3e-06	0.00025	22.0	1.2	1	23	667	689	667	689	0.98
11	12	0.00066	0.054	14.6	0.8	3	23	697	717	695	717	0.96
12	12	6.4e-06	0.00053	20.9	2.0	1	23	723	746	723	746	0.98

Sequence Information

Coding Sequence: ATGTTGGATTTAAAAGCGTGCACGGTGTGTTTCAGCACTGATTCAAAACTGTACAATTTGAATAGTGGTAATTTGAGGCATGAATATAATTTAGTATCCGGCCTCCATACACAAGCGGGCAACGGGCTGCCTGAGTTTCTGTGTGTGTTTTGCTTGGCGCTTGTGAGGCGGGCCGCTAAGTTTCGAGATAAATGCCAACGGGCACATTATGCTTTGCAGGAAATTTTGTACAGGAGTAAAGAGATAAACAAATCACATTTAGAGTTATTTAATAGAAAGGAATTGGGCATCATGCCACCACTGTCATATTTAAATTTGAGACAAACTCACTATGAAGATGTGAAGTTTCAATGGGTGCGGCACAACAGGCTCATGATCACTACAGGAGACGCAATACCGATAGCTCATTACGGTACTCTGACAAACCAAGACACATTTTGTAACGAAACAGAGAACAGTAACGTAAAAACTGAGAGTGATGATGAATGCAGTAACAAGTTTGATAAGGAACTCGCTAAAGAAGAACAATTCATGGAACAGGCAAACACAGATGATGTTGCTGGTGATGATTATTTTGATGATAACCATGATGATGATAATGAATGTGATGAAAAGGAAAGTGGTAATATGGAGACATGTAAACTTGATAGTAAGGTTGATGGTTCGCAACTTGAAGAGGAGTATGCCAGTATATATCCTATTTCGGTGAAGGAAGCCAAAGCCGCATTGGAAGTGTATAAGTTCTTCAGCAATGGGAAGTATAGATGTACTGTGTGTAACAAGAGTTACCACAATGAGGAAAGGCTGAACGTACATTCCCGTATGCATGATAAACACACTAGTGGTAATTATCACTGTAACCTTTGTGATTATTATTATAAAACCGATTTCCTATTGCAAACACACATGACTGAAAAACATATTTACAAGTATGTGTGTAGGAAGTGTCCAGAAGTTAGTTTTGATAGAATATCAGCAAAACAACACTACATATGGAGTCATCTACAAAAAGGACAAAAGAAAAATGCGAATTGGTACGAATCGCGTCCCAGCTGGTTGAGCGGGAAAGGCGGCAAGCGAGTAAAAGGAGTCGTAACACTACGGCCTGTCAGGAAAATGAACAAACTGCCAGACGACTTCCTAATATACACACCGATCAGCCAAGAGGAACAGTACCAACTAGTGAAGGACAGAAAGAAAACAAGGAATTACATCGATTCTGTGTATAAATGTGAGTTGTGTTATAGGGGATTCAGAGAATCGGCGACGTATGAAAAACATATGAAGAAACATGACCCGGCATACGCGGGTAACGTGCAGTGCGACATGTGCAAGCTCTACTTCCGCGACTCCCGCAAGCTATACAAGCATATGAACATCACGCATCTCTTCAAGTACTCCTGCCAGCTGTGCAGTTACTTCTGTGTTAATAGGAGTCAAGCCCATTCACATTACAGATGGCATAAAAACGTCACCTATTCCTGTCCTCACTGTGATAAAGTATTTAAAAAACTATCAACCCGACTGACTCATATAAGAATAAAACATCCTTCGACAAATATATGCAATTTGTGTGGGCACAGTTTCGTCAGTGAGAATGGTTTATATTGTCATAAGCAGATTGCGCACAGTATTGAGGAGCGGGAACAGAGCGAGTCGGCGCCGACGGACCCGTCGGACCCGTACTACTGCGCGGACTGTGCCGTGCAGTTCCTCAGCGACCACGCCTTCGCCACGCATCTCGGCAGCTCCAACAAACACGCATCCACCAACCTTTCAATAAAACCGAGTCGCAAATTGGAGCTGGCGTCGAAGTTGGACAAGAGCGATATAAAGAAACGCGGGCGGCCGCGCATAGGCGGCGCTCGGTCCGACATACTCAACAACGGACTCACCACGTCCACCAACTGCGAAGTGTGCGGCAAAGTGTTAGTGAACGATGTGCAAGCGCGCAAACACTACGAGTCGGAGCACCCCGGCACCGAGTACCTCAAGCGGTACATGTGCGACGTCTGCGGGCACACTACCAGGCAATACGCAAACCTGATGGTGCACATGCGCACGCACACGAACGAGAAGCCGTACGGGTGTCCGCACTGCGACAGGCGGTTCAGCATGCCCAGCAACAGAGATAGGCATCTTGTTGTGCACACTGGTGAGAAACGCTACGAATGTCAGCACTGCAACCGACGTTTCACACAAAGCAGTGCCGTCAAACTTCACATACAGACCGTCCATCTCAAGATACCTTACGCCCCCTGGGTTAAGAAGAACAGGAAGCGACGCAAGGAGTTGGAAGGCACCAGCGCACCAGTCAGCGCGGTGACCTCCAACCCACCCTGTCTGCCGCCCCCACACAAATTAATGCTTGATACTCAAGGGGACTACCTCAATGCGTACATCAATTATAGTGATTATTGA
Protein Sequence: MLDLKACTVCFSTDSKLYNLNSGNLRHEYNLVSGLHTQAGNGLPEFLCVFCLALVRRAAKFRDKCQRAHYALQEILYRSKEINKSHLELFNRKELGIMPPLSYLNLRQTHYEDVKFQWVRHNRLMITTGDAIPIAHYGTLTNQDTFCNETENSNVKTESDDECSNKFDKELAKEEQFMEQANTDDVAGDDYFDDNHDDDNECDEKESGNMETCKLDSKVDGSQLEEEYASIYPISVKEAKAALEVYKFFSNGKYRCTVCNKSYHNEERLNVHSRMHDKHTSGNYHCNLCDYYYKTDFLLQTHMTEKHIYKYVCRKCPEVSFDRISAKQHYIWSHLQKGQKKNANWYESRPSWLSGKGGKRVKGVVTLRPVRKMNKLPDDFLIYTPISQEEQYQLVKDRKKTRNYIDSVYKCELCYRGFRESATYEKHMKKHDPAYAGNVQCDMCKLYFRDSRKLYKHMNITHLFKYSCQLCSYFCVNRSQAHSHYRWHKNVTYSCPHCDKVFKKLSTRLTHIRIKHPSTNICNLCGHSFVSENGLYCHKQIAHSIEEREQSESAPTDPSDPYYCADCAVQFLSDHAFATHLGSSNKHASTNLSIKPSRKLELASKLDKSDIKKRGRPRIGGARSDILNNGLTTSTNCEVCGKVLVNDVQARKHYESEHPGTEYLKRYMCDVCGHTTRQYANLMVHMRTHTNEKPYGCPHCDRRFSMPSNRDRHLVVHTGEKRYECQHCNRRFTQSSAVKLHIQTVHLKIPYAPWVKKNRKRRKELEGTSAPVSAVTSNPPCLPPPHKLMLDTQGDYLNAYINYSDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00859816;
90% Identity: iTF_00859816;
80% Identity: -