Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387641.1:4898009-4907933[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.085 7 7.9 1.7 1 23 113 135 113 135 0.94

2 9 0.0035 0.28 12.3 1.3 1 23 142 164 142 164 0.95

3 9 0.39 32 5.9 2.2 1 19 168 186 168 189 0.89

4 9 0.0017 0.14 13.3 1.1 2 23 198 220 198 220 0.97

5 9 8.4e-06 0.00069 20.5 1.6 1 23 226 248 226 248 0.96

6 9 1.1e-06 9e-05 23.3 2.4 1 23 254 276 254 276 0.98

7 9 0.00044 0.036 15.1 1.2 1 21 282 302 282 303 0.94

8 9 3e-05 0.0025 18.8 1.4 1 23 313 336 313 336 0.96

9 9 7.4e-06 0.00061 20.7 3.1 1 23 340 363 340 363 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.085	7	7.9	1.7	1	23	113	135	113	135	0.94
2	9	0.0035	0.28	12.3	1.3	1	23	142	164	142	164	0.95
3	9	0.39	32	5.9	2.2	1	19	168	186	168	189	0.89
4	9	0.0017	0.14	13.3	1.1	2	23	198	220	198	220	0.97
5	9	8.4e-06	0.00069	20.5	1.6	1	23	226	248	226	248	0.96
6	9	1.1e-06	9e-05	23.3	2.4	1	23	254	276	254	276	0.98
7	9	0.00044	0.036	15.1	1.2	1	21	282	302	282	303	0.94
8	9	3e-05	0.0025	18.8	1.4	1	23	313	336	313	336	0.96
9	9	7.4e-06	0.00061	20.7	3.1	1	23	340	363	340	363	0.97

Sequence Information

Coding Sequence: ATGGATATTGCCAAAGATGGTAAAATGTTATCAGACAAGGAAAAGACTGAAAAAATACAAGCAACAAAATACACATTAAGTTTTCATCACAATCCATGTATAGACATACCTCCTAAAGATTACATAATAGAAAAACAAAAAGATAATAAAGGAAAAAAAGATAATATTAAATTAATGCACAAAATAGATTTGAAAAAAGAACCTAATACAAAATTGAGTAAATTAAAGAACCATAAATTAGATGAGATGAATTTTAATGTTCGTTATTTGAATTTTGAGGAGCAAAAGAAAGAAATAGAAGATAAAAAAAGATTGGAAAAGTATAAACAATGGTGTTTTAAATGTGATGATTGTGGAATTAGCTGTATGATCAAGCTTGAATATGATGAGCACCGAAAGAGACATGATCCGATTTCAGGTCAATATGCTTGCAAAATATGTCACCTAAGGTTTAAATCGACTGAAGTTCTCTCTCAACACACTCTAGCGCATAAACGTAGATTTGAATGTCGCGCGTGCGGGTCCAAGTTCAAGCGTTGGTCCCACTGTGTGGTGCATCGGGTGAAATGTGGGACCAACGTCACGCCGGCTGTGTGCGGCGTTTGTGCTAAGATATTTGGAGATCATCATTCCATGACAGTCCATATGAAAACTGTTCATAGAAAGACGAAGAAATATTTGTGTGAACATTGTGATAAAGCGTTTGGGACGAAACAACGGCTTACTGTTCATATAAGGTCTCACACGGGAGTCAAGCCTTTCTCATGCGACGAATGTTCTAGAACTTTCGTAACGCATTCGAATCTGCGTGCGCATACTAAAGTGCATAGTGACAATAAGGACCATTATTGCGTGGAGTGTAACAAGTATTATAAGAGCGAGAAGAGTTTGAAAAGACATATTCTAGAAGCTGCTAGACATGCTGGCGAAGGGAGGTATTCGTGTAAAGAATGTTCCAAGAAATTTATAACGGAGCAACTGTTGAACAAGCATACGCAGCAAGCACATTTGACGGAGCACCGCTGCGAACAATGTTATAAGTTGTTTTCCAATAATGCAAATCTAAGGAAACATTTGCGTTCCATCCATACAACGACAGAAGCGTGA
Protein Sequence: MDIAKDGKMLSDKEKTEKIQATKYTLSFHHNPCIDIPPKDYIIEKQKDNKGKKDNIKLMHKIDLKKEPNTKLSKLKNHKLDEMNFNVRYLNFEEQKKEIEDKKRLEKYKQWCFKCDDCGISCMIKLEYDEHRKRHDPISGQYACKICHLRFKSTEVLSQHTLAHKRRFECRACGSKFKRWSHCVVHRVKCGTNVTPAVCGVCAKIFGDHHSMTVHMKTVHRKTKKYLCEHCDKAFGTKQRLTVHIRSHTGVKPFSCDECSRTFVTHSNLRAHTKVHSDNKDHYCVECNKYYKSEKSLKRHILEAARHAGEGRYSCKECSKKFITEQLLNKHTQQAHLTEHRCEQCYKLFSNNANLRKHLRSIHTTTEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -