Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387614.1:6964423-6991673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0058 0.48 11.6 4.7 1 23 214 236 214 236 0.98

2 11 1.9e-05 0.0016 19.4 2.0 1 23 242 264 242 264 0.98

3 11 7.7e-05 0.0063 17.5 1.7 1 23 270 293 270 293 0.96

4 11 0.033 2.7 9.2 3.3 1 21 299 319 299 321 0.95

5 11 0.00012 0.0095 17.0 2.7 1 23 327 349 327 349 0.99

6 11 3.2e-05 0.0026 18.7 5.5 1 23 355 377 355 377 0.98

7 11 0.0057 0.47 11.6 0.5 1 23 385 408 385 408 0.96

8 11 0.0019 0.15 13.2 2.1 2 23 415 436 414 436 0.96

9 11 0.00014 0.012 16.7 2.3 1 23 442 464 442 464 0.98

10 11 3.9e-06 0.00032 21.6 3.6 1 23 470 493 470 493 0.96

11 11 7.4e-06 0.00061 20.7 4.8 1 23 507 529 507 529 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0058	0.48	11.6	4.7	1	23	214	236	214	236	0.98
2	11	1.9e-05	0.0016	19.4	2.0	1	23	242	264	242	264	0.98
3	11	7.7e-05	0.0063	17.5	1.7	1	23	270	293	270	293	0.96
4	11	0.033	2.7	9.2	3.3	1	21	299	319	299	321	0.95
5	11	0.00012	0.0095	17.0	2.7	1	23	327	349	327	349	0.99
6	11	3.2e-05	0.0026	18.7	5.5	1	23	355	377	355	377	0.98
7	11	0.0057	0.47	11.6	0.5	1	23	385	408	385	408	0.96
8	11	0.0019	0.15	13.2	2.1	2	23	415	436	414	436	0.96
9	11	0.00014	0.012	16.7	2.3	1	23	442	464	442	464	0.98
10	11	3.9e-06	0.00032	21.6	3.6	1	23	470	493	470	493	0.96
11	11	7.4e-06	0.00061	20.7	4.8	1	23	507	529	507	529	0.97

Sequence Information

Coding Sequence: ATGCCACCGCCTATGAGTAAGGAGAAGGAGAAATCTCTGTTGGATTCAATAATGGACCAAGATTCACCAGTTATAACACTGAACACGGAGGAGGAGCCGGAGCCGACGGGTGTGACGTACTTCGTAGATGAAGAGGGGCGTTACTACTATCAGTCGACGGGAGAGGCGCAGAACATGGTCTCGCTGCGGACTGAGGTCTCCGGGAACACTGAGGCGATGGACGAGGACCCCAATATGCTTGTGGATCCCACTGGCGAGGCGTTCCAGACGATGACGCTGGTGCCTTCGGAGACGTCCGGCGGCGAGGTCAGCTACGTGCTTGTCGTGCAGGAGGATAGCAAGCCGCTCGTCAACCTCGATATCAAAATGGACCAGGGCGAGAACGTGTTGGACAAGCTAGCGGACGACAGCTGGGATGGAAAAGGCGAGGTGGATCCTAAACTGGAGCTCGCTGAAGCACTCTTCCATCTGCAAGATGGAAATAAAGACACGGACGACGCGGAGAAGGGCAACGACGACGTGTACAACTTCGAGGACGAGGAGGCGCCCGCGGAGGAAGACGAGGACGAGGACGACGTAGAGGGCAAGATCAAGCTGCCCACCGTCAGCAACAAGCGGCTTAAGTCTCTGCGGCCCCACTTTCCCTGCAGCTTCTGCACTTACACTAGCCATAGACGCTACCTACTGCTGCGCCACATGAAGTCCCACTCGGAGGACCGTCCGCACAAGTGCAGCGTGTGCGAGCGCGGGTTCAAGACCATCTCTTCGCTGCAGAACCATCTCAACATGCACAACGGGGTCAAGCCGCACGTCTGCAAGTACTGCAACAGTCCATTCACTACATCCGGTGAACTGGTGCGCCACGTTCGTTACAAGCATACGCACGAGAAGCCGCACAAGTGCACCGAGTGCGATTACGCGTCCGTCGAGCTGTCAAAATTACGACGTCACGTGCGATGCCACACCGGCGAGAGGCCGTACCAGTGTCCACACTGCACGTACGCGTCGCCCGACACGTTCAAGCTGAAGCGGCACCTGCGCACGCACACAGGCGAGAAGCCGTACAAGTGCGAACACTGCAACATGTGCTTCACGCAGTCCAACTCGCTGAAAGCGCACAAGCTCATACACAACGTATCGAAGAAGCCGGTGTACGCGTGCGAGCTGTGCCCCGCGAAGTGCGGCCGTAAGACGGACCTGCGCATCCACGTGCAGAAGCTGCACACCTCCGACAAGCCGCTCAAGTGCAAGCGGTGCGGCAAGTCATTCCCAGACAGATACTCGAGCAAGGTGCACAATAAGACGCACGAGGGCGAGAAGTGCTTCAAATGTGAGCTGTGCCCGTACGCGTCGACCACGCTGCGCCACCTCAAGTCGCACATGCTGAAACACACCGACGAGAAGCCGTTCGTGTGCGACCATTGCGACCAGTCCTTCAGGCAGAAACAGTTGCTCCGACGCCACCAGAACCTGTACCACAATCCGAACTACGTGCCCAAACCGCCGAAGGAGAAGACTCACACGTGCCACGAATGCAAGCGCACGTTTGCGCACAAGGGCAACCTGATACGGCACTTGGCCGTGCACGATCCGGACTCGGGACACCAGGAGCGAGCGCTCGCACTCAAGATCGGACGTGAGAGAAAGATCAAATTCCTGGACGGCGATGTGGTTAAGGAGTCGCATTACCGCACGGAACGCGACGAGTCCGCCGAACTGATGAAGCTTGGACTCGGCGCGAACCACCTGAAGCGCGGCGAGCTGGTGACGGTGGCGGACAGCGACGGTCAGCAGTACGTGGTGCTCGAGGTGATCCAGCTGGAGGACGGCACCGAGCAGCAGGTGGCCGTCATGCCGCCGGACTTCCTCGACGAGGACGATGAAGAGGAGCAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAGGTGAGCAAGGATGAGGAGATGGCGAAGGCGCTCCAGGAGCAGGCGTCGCAGAAAGCGCACGAGCGCAGCATCAAGCTCGAGAAGGAGGTGGATTCGTGCTTCGGATTTGATGAGGAGGAGGAAGAGGAAGGCGAAGTGGAAGAAGACAGCTTCACAGAAAAGATGGTGTTGCGCCTGGTGTAA
Protein Sequence: MPPPMSKEKEKSLLDSIMDQDSPVITLNTEEEPEPTGVTYFVDEEGRYYYQSTGEAQNMVSLRTEVSGNTEAMDEDPNMLVDPTGEAFQTMTLVPSETSGGEVSYVLVVQEDSKPLVNLDIKMDQGENVLDKLADDSWDGKGEVDPKLELAEALFHLQDGNKDTDDAEKGNDDVYNFEDEEAPAEEDEDEDDVEGKIKLPTVSNKRLKSLRPHFPCSFCTYTSHRRYLLLRHMKSHSEDRPHKCSVCERGFKTISSLQNHLNMHNGVKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHKLIHNVSKKPVYACELCPAKCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSSKVHNKTHEGEKCFKCELCPYASTTLRHLKSHMLKHTDEKPFVCDHCDQSFRQKQLLRRHQNLYHNPNYVPKPPKEKTHTCHECKRTFAHKGNLIRHLAVHDPDSGHQERALALKIGRERKIKFLDGDVVKESHYRTERDESAELMKLGLGANHLKRGELVTVADSDGQQYVVLEVIQLEDGTEQQVAVMPPDFLDEDDEEEQEEEEEEEEEEEVSKDEEMAKALQEQASQKAHERSIKLEKEVDSCFGFDEEEEEEGEVEEDSFTEKMVLRLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00341571;
90% Identity: iTF_00859733;
80% Identity: -