Basic Information

Insect: Sphinx pinastri
Gene Symbol: Znf296
Assembly: GCA_947568825.1
Location: OX387614.1:17362964-17375783[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0043 0.35 12.0 0.3 1 21 135 155 135 156 0.94

2 13 0.03 2.5 9.4 0.3 2 20 170 188 169 188 0.95

3 13 0.0021 0.17 13.0 2.8 1 23 231 253 231 253 0.97

4 13 5.3 4.4e+02 2.3 0.2 2 23 331 353 330 353 0.88

5 13 0.036 2.9 9.1 0.1 2 20 359 377 358 379 0.91

6 13 0.00024 0.02 16.0 1.8 1 23 387 410 387 410 0.97

7 13 8.4e-05 0.0069 17.4 1.5 1 23 432 454 432 454 0.98

8 13 1.1e-07 8.8e-06 26.5 2.4 1 23 461 483 461 483 0.99

9 13 1.2e-07 9.6e-06 26.4 2.3 3 23 497 517 495 517 0.96

10 13 2.7e-05 0.0022 18.9 3.2 1 23 523 545 523 545 0.99

11 13 9.3e-07 7.7e-05 23.5 2.7 2 23 552 573 551 573 0.96

12 13 1.4e-07 1.1e-05 26.2 1.5 1 23 579 601 579 601 0.99

13 13 0.0033 0.27 12.4 0.1 1 23 607 629 607 629 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0043	0.35	12.0	0.3	1	21	135	155	135	156	0.94
2	13	0.03	2.5	9.4	0.3	2	20	170	188	169	188	0.95
3	13	0.0021	0.17	13.0	2.8	1	23	231	253	231	253	0.97
4	13	5.3	4.4e+02	2.3	0.2	2	23	331	353	330	353	0.88
5	13	0.036	2.9	9.1	0.1	2	20	359	377	358	379	0.91
6	13	0.00024	0.02	16.0	1.8	1	23	387	410	387	410	0.97
7	13	8.4e-05	0.0069	17.4	1.5	1	23	432	454	432	454	0.98
8	13	1.1e-07	8.8e-06	26.5	2.4	1	23	461	483	461	483	0.99
9	13	1.2e-07	9.6e-06	26.4	2.3	3	23	497	517	495	517	0.96
10	13	2.7e-05	0.0022	18.9	3.2	1	23	523	545	523	545	0.99
11	13	9.3e-07	7.7e-05	23.5	2.7	2	23	552	573	551	573	0.96
12	13	1.4e-07	1.1e-05	26.2	1.5	1	23	579	601	579	601	0.99
13	13	0.0033	0.27	12.4	0.1	1	23	607	629	607	629	0.97

Sequence Information

Coding Sequence: ATGGCACCACACGATCCTGGATTACGACTGCAACATTTGCGCGAAGCGCAGTATATATACCACCTCCGAATTCGCAAGGGCGATGGACTGCCTTCGACCATATGCTGTGAATGTAGGGATAAAGCTGAAAAGGCATATTACTTTAGGACAAAATCACATGAAGCTGATATATCGTTGAAGGAACTCTTCAAGAAAGATAAATTTGAACATGTTATTCACAGCAAACCGTCTTTAAAGCCAATTACTACCAGTGTAAAAATAGAACATTTAACCGCAAATGATACAGATGATTTTTCTGATACTGAATTTCACGTACCAATCGACAATGGCCCAGACGATTTGGCAGATTTAAGTTTGGAACCAGTAAAAAATGAAAAAGCACAACATGATAACCCTTCATTTTATGAATGTAAAAATTGCTTAATCGTTTTTGAAAGTCAAGACAAGTTGCAGGACCACAATAGGAAAAAGTGTATAAAAGTTGAAATTGAAGATACCAATGGCACATATTGTCCCCTTTGTGGAACATGTTATGATGGAGTTGAAAACCTATCAAAACATTTGTGGGAGTATCATGCTGAAGTCATGGGTCCAAAAAAGCGAGGGAGACCTAAGAAGATGCTGACTAGTACAATACTGGATAAGCTATCAGAAAACGGATTTTATATTACTACTGTCCCTGTCAAAAAATATGATTGCTCTTTTTGTACAGAGCAATGTTACACCAAAGAAGAATTAGAAAATCATATGTTGAAGCATAAAGATATGAAAGTATTGTGTTGTATTGTATGTAAGAAAATGTTTCTAAAACGGCAAAGCTTTGAAGAACATGTTTGCTCTGAAGATAAAACTGATGAGAACAAACAAAATCATGAAGATGATTCCGATTTGCAAACCACCAAAAATAAAATATTAAATTATCTCACTGAAATGTCACTACAAGAACTTTTGGAACCTAATTGCGATGTGGAGAATCTAAATTTTCTAAAAGTGTGCAGCTCGTGCAGCGCTGTATTTTTGTCAGAAGAGGATCTCATTAACCATCACGACGGGGAACATCCTGAACTATCGCTCCGTTGTAACCTCTGCACTAAGGTATTCGCAACTGTGAAGTCAGCAGCACGACATAGGACTATTTGTAAACAGGTGGAAAGGAATCATAAATGCAGCACCTGTGGTCTCAAATTTGCTTACGAGATATCACTCAACAAACACATTCTGAGATACCACCAAGGCCAGAGCGTGTCGATCACTTTCACGGATTCCATAGAGAAGCAGGAGGAAGATAAACAATACCAGTGCGATACGTGCAATAGATATTTCTTTAGAAAGGAATTGCTCGCGAAACATGCCAAAATACATATGCCCAATCAAAAATATTTCCAGTGCGATATATGTGAAAAGAAATTCACAAGAAAAGACAATTTAAGGTCACACAAGCGTATCCACGACCCACACAGAGAGAAAGGTCCAACGAACACTTGCTTATGCCTGTACTGCGGACGTAGTTTCTCGAATTCGTCCAATCTTATTGTCCATATGCGACGTCATACTGGCGAAAAACCATATAAATGCGACTTTTGTGGCAAAGGTTTTCCGAGATCGTCTGATCTTCAGTGCCACAGGCGCTCACATACTGGCGAGAAGCCATGCATTTGTCGAGTTTGTGGAAAAGGTTTCTCGCGTAGCAATAAACTGACACGGCACATGCGCGTGCACACCGGCGTGCGCCCGTACAAGTGCACGTATTGCGAGAAGGCGTTCTCGCAGAGCAACGATCTCACGCTGCATATCCGTCGGCACACCGGCGACCGGCCCTACATATGTGAGGTGTGCGGAGACAGATTCATTCAGGGTACTGCTCTACAGAACCATCGACGTGCCCACGGCCATTTCCCAACCGCTGCAGCTGAGGTAGACTCCCAGGTCCAAGGTCTACAGTATTCAGTTCAAAATATAGCTCAAAATAGTCATTAA
Protein Sequence: MAPHDPGLRLQHLREAQYIYHLRIRKGDGLPSTICCECRDKAEKAYYFRTKSHEADISLKELFKKDKFEHVIHSKPSLKPITTSVKIEHLTANDTDDFSDTEFHVPIDNGPDDLADLSLEPVKNEKAQHDNPSFYECKNCLIVFESQDKLQDHNRKKCIKVEIEDTNGTYCPLCGTCYDGVENLSKHLWEYHAEVMGPKKRGRPKKMLTSTILDKLSENGFYITTVPVKKYDCSFCTEQCYTKEELENHMLKHKDMKVLCCIVCKKMFLKRQSFEEHVCSEDKTDENKQNHEDDSDLQTTKNKILNYLTEMSLQELLEPNCDVENLNFLKVCSSCSAVFLSEEDLINHHDGEHPELSLRCNLCTKVFATVKSAARHRTICKQVERNHKCSTCGLKFAYEISLNKHILRYHQGQSVSITFTDSIEKQEEDKQYQCDTCNRYFFRKELLAKHAKIHMPNQKYFQCDICEKKFTRKDNLRSHKRIHDPHREKGPTNTCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLTRHMRVHTGVRPYKCTYCEKAFSQSNDLTLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPTAAAEVDSQVQGLQYSVQNIAQNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00428364;
90% Identity: iTF_00859704;
80% Identity: -