Basic Information

Gene Symbol
ZFX
Assembly
GCA_947568825.1
Location
OX387616.1:297545-305163[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 33 0.014 1.1 10.4 1.5 2 21 162 181 161 182 0.94
2 33 0.98 80 4.6 2.6 1 23 215 238 215 238 0.95
3 33 0.0096 0.79 10.9 3.0 2 23 244 265 243 265 0.95
4 33 1.7 1.4e+02 3.9 4.8 3 21 270 288 269 289 0.93
5 33 0.012 0.95 10.7 0.7 2 23 331 353 330 353 0.95
6 33 4.7 3.9e+02 2.5 0.4 3 23 361 380 360 380 0.89
7 33 0.0092 0.75 11.0 1.9 1 23 386 408 386 408 0.98
8 33 0.0013 0.1 13.7 1.7 1 23 414 437 414 437 0.97
9 33 0.071 5.8 8.2 0.9 2 21 554 573 553 574 0.94
10 33 0.36 30 6.0 0.8 1 23 604 626 604 626 0.96
11 33 0.00042 0.035 15.2 0.2 1 23 630 652 630 652 0.96
12 33 0.0019 0.16 13.1 2.5 1 23 685 708 685 708 0.94
13 33 0.00036 0.03 15.4 1.1 1 23 714 736 714 736 0.98
14 33 0.0064 0.52 11.5 4.3 1 23 743 765 743 765 0.98
15 33 3.9 3.2e+02 2.7 0.3 1 9 780 788 780 790 0.91
16 33 0.0017 0.14 13.3 1.9 2 22 897 917 896 917 0.88
17 33 5.3 4.4e+02 2.3 0.3 3 23 923 943 922 943 0.87
18 33 0.046 3.8 8.8 1.1 2 23 949 971 948 971 0.94
19 33 0.12 9.8 7.5 5.9 1 23 976 998 976 998 0.97
20 33 0.7 57 5.1 3.8 1 21 1001 1021 1001 1022 0.95
21 33 0.00037 0.03 15.4 0.4 1 23 1034 1057 1034 1057 0.95
22 33 2.5e-06 0.0002 22.2 1.9 1 23 1063 1085 1063 1085 0.99
23 33 6.7 5.5e+02 2.0 0.5 1 23 1119 1142 1119 1142 0.87
24 33 0.0023 0.19 12.9 0.7 1 23 1150 1173 1150 1173 0.94
25 33 0.0056 0.46 11.7 1.1 2 20 1284 1302 1283 1304 0.91
26 33 0.0043 0.35 12.0 0.6 3 23 1339 1360 1338 1360 0.97
27 33 0.00027 0.023 15.8 0.9 2 23 1366 1387 1365 1387 0.97
28 33 0.78 64 4.9 1.6 2 21 1391 1410 1391 1411 0.93
29 33 1.4e-06 0.00012 23.0 0.4 1 23 1437 1460 1437 1460 0.95
30 33 0.00063 0.052 14.6 0.5 1 23 1466 1488 1466 1488 0.95
31 33 0.11 9 7.6 0.1 1 23 1494 1516 1494 1516 0.97
32 33 0.0014 0.12 13.5 0.8 1 23 1522 1545 1522 1545 0.95
33 33 0.00041 0.034 15.2 1.8 2 23 1552 1574 1552 1574 0.96

Sequence Information

Coding Sequence
ATGTCCCGACAAGTGGATGTAAAGGCATTAGTCTCCCATATAGTCAGAGGCGATGGCGCGGATAAATGCCGAATTTGTATGGGTGATACCTCCGAGGGTCAAGTATTCCTTGGCGACACAGTTATGATGGACGGAGACAAGGCGGTGACCCTCGCTGAGCTTCTAGAACTTATTACAGGCGTTGAGGTGGCTGAGGATGATGACCTGCCAAATGGACTGTGCAGAAAATGCTCAGCGTCTGCATTCAATGCTGCTGAGTTCCGGACATTCTGTCGTGAAGCATCTGAACGCTGGACCACCATTCTAGGCATGCTCAACATGATCCCCAAAAACAATTCAAAGAATATCTATGCTTTGATATTGGGCAACAAAATCTCCATATATGACAATAAAATGTTCAAAGAACCGCAGGAAAAGGCAAAGGAGGCTTGCCCAAAGGTTAAATCTATAAAACATAAAAATTATGCAAAAAGTTTGCATTGTCAGTGTTCAACTTGTGGGAGAAACTTCATGTACGCGAATGAACTGCATGCACATTTAAAAGAATCCATGGATTTGATCCAAGCTTGCTACGTTTGTGCCAAAATTATGAGTAGAGAGGATTTGATCAAACATTTGGTCCAAAAACACAATAAAAAACCACACCCTTGCAAGAAATGTTCAACTATATTAAATTCCTTCATGCAATACAAGCAGCACATGGTGAAGGAACACGGTCCTGGAGTGTGTACATGTGGGGATTGTGGGAGAACATTTCAGTCTACAAAAGCATATCATGCTCATCTGTCCATCCACGCACCTAAAAATTGTCCTCGTTGCTCAAAACTATTCCGAAATAAGAAATGCTATGTACACCATGTGAAAAAATGCTGTAACTTGCACAAAAACAGAAAAGAAGTGCATCAAACTAAACACAAGTTGTCCATACTAGTCAAAAACAAGGATAGACACATCAAAGTGGGTCTGCGAGGCAGTGCCGATAAGGAGTGCATTTGTGATTACTGTAAAAAACGATTTGCGGGAAAGAAGTTTGTTGCAGCACATATCCAAATAGTTCACTTAAAGAACACGCATAGACCATGTGCTTATTGTGGCAAGTTGCTTGCTGCTGCTCACATGTCGTCGCACATGAAGAAGCACCAGCCGTCACAGAGTTATAAATGTAGTCACTGCGATATTGTCCTAAAAAGTAAACTGGGCTACAGTCAACACTTGCGGCTGCACACTGGTGAACGACCATACAAGTGCCAGTACTGCGGAGAGACATTCACAGCGTCCTCAAGGAAGTCTGAGCACATCCGCAAAACACATAAGAGCACAGAAGAAGTGGGGACCAGCTCCGTGCTGCCAAATAAACTGTGCAAACTCTGCATGGCGCACATAACCGCTTTCATACCATTCCTGCTCCTGTGCAAGGTGTCCGCCCAGCGGTGGGACCAAATCACAGGAATGTTGAAGGATATCAAAGTCCCAAAAAAGGCCAAAAGTTATTATGTCTTAGTTCTAAAAGATATACGGACTTATTCTAGTACTAGAACCGCTGAGAGCGAAAAAGATGCTTTACAGAATTTGAAGACTAAGATAACAAATCGAAAATCTTATACCAAGAGGTTAGCAAAAGAGGGTCGCATGACTAGAATGAGGGATGCGACGAAAATGACGTGCCCCGAATGCAAATGTGTCTATACCAACATTGTAAAGTTTAATACACATATAAAAAACATAAACAAGAGAATGTGCGCACTCTGTAACGTTCTAATAGACTTGAAGACTTACGAGGCCCATTTGAACACTCACACTGGCAGGGTTTTTAGTTGTAATATGTGCCCCGAGGCATTTCTAAAAGAAAAGTCTTTGTATCTTCATAAATTAAAACACAAAGGAGACCATGTTTGTTTGGAGTGCAAGTTGAGTTTCGTGACGTCGGCGAACCTCTCCGCTCATTTAGTGATACACCAGTCGCAAGTGTGCGCTGGATGCGGTAATAAGTTCAATAGGATATGCTACACGAAACATAAACAAAAGTGCTCGTTTATAGAAGAAAATAGAAGATTCATCTGTGACTACTGTTCAAAAGAATACAACCGAAGAACTACGCTCAAGCTGCATATAATTCACAACCATTTGACTGGAAAGCAGTTTCAGTGTGACCAGTGTGGTAAGACGTTCCTCAGTCGCGCGCATTTGGTAGAGCACGGCAACACTCACAACAAAATTCCCGATCGATACGTCTGCTCGAAGTGCGGCACCAAGTTCAGCACCAGGAGAGGCCATGAGAGACATTTGAAGAAACACGAGTCTGGCACTTACGGAGTTAGGTCCAAGAAGAAGACCAAATATGTTTGCCCGATTTGTAAGAAGGTGCGAGAGGAGCCCGCGTTGCCGCAGGGTCTGTGCAGGAGCTGCTCCGAGCAGGCCATGGCCGCCGTGCGGTACCGGCAGCTATGCATCCAGTCCAACCAACAATGGAGAGACGCCACCGTCTGCCTCGCACAGATACACGCCGCCGCCGATGATGACAAAACCTTCTTCGTACTCTACAACGGACACATGATGATCATCAAGGACCAGGTCGCGCGCGTGCCGAACGAAACCGAGGCTGTGAAGAGGATCAACCTCAGATTCACTGATCCAGAGCCTCACCGGCCGCCCAAAAGAGTAAAGCGCTCATTCCCGCCTGTTAGTTGCCAATGCCCGGACTGCGGCAAGAGTTTTTCAAATACTGAGTTCTTAAACTTCCACCTAAAGACCTCATTGAAACGATCTTGTCAAATATGCGGCGTAGTCATGCCAAAAAAAAACCTGTCGAAACACTTGCTGGAAAAACATGACATATCAGTGGTGGAGTGTAGTGTGTGCCACAGCAACTTCGACACGCGTCAACAGCTCGAACAGCACAGCGCCACTTCCCACGGCCCTGACACGTATTCTTGTCATTGTTGCGGCAGCGGATTCAGCAACCACAGAGCCCTGCGCGCCCACATGTACTCGCACACGCTGTTTCATTGCGAGGCTTGTGGAGCGAGCTTCGAGAATCGTAAATGCTACAAGTATCATCAGAAACAGTGCAAGAGATCAGACGGACCGCAGCAAGACCTGTACATATGTGACTACTGCAATATAGAGTACAATAGGAAGCCGTCGTTACGAATCCATATGATTCAGAAGCACTTGAATATCAACCCGTACGTGTGCCAAGTGTGCGGCAAGAGGGCTTCGACGTTGTCGCACTTGAAATCGCACATGAAGACGCACAACGCGACGCGCAGCGTGTACCAGTGCCACTGCGGCGCGAAGATGCGTACGGAGGTCGGGTACCAGCTACACCAGCGGATACACTCGGGGGAGAGACCGTACGAGTGCGAGACGTGCGGCGATCGGTTCCTGTCGGCGTCGCGGCGGCTCGACCACATCAAGCGGAGGCACCGCGGCTCCGCAGACATGCCGCACGCCTGCTACAAGTGCTCCGCCACTTTCATTAGACCTTGGGAGCTGCGGAAGCACTACGTGACTGTTCACAACGATATAAAGGAAGAATCATTATGTCCGAACACGGCATGCGTGGCGTGTGCCAGCACGGCTCTGGCCGCGCAGGAATTCCGATACTTCGTCCAATCCTCGCATAACATGTGGAATAAAGCCATCACAAACCTCTCGGGGCTGCCAAGCACAATGTCTTCCCCGCTGAAGTCTCTCTGTGTGCTCATAACGCCGAACGACATGCGTGTACAGACAGTGAAAAACTACGCCAACGGTGATGCTAAAACTGTATTGAACAGGCTCAAAACAGGGATCGGTAGAAAGCCATTCGGGCGGAAGCCTCGTACCGACCGCACGGGTCCGTCGTGCACGTGTCCAGACTGCGGCAAGAGCTTCCTCAGTCCACACTTCTTGAACATGCACCTTATAAACAGTGGACAGAAGGAGGCGTGCGTGCTGTGTGGCGACGTGGTGTTACGCGGCCAGCAGATGAAGGAACACATGAGCGCCGCGCATCGCACCGACCTGCTGCTCTGCAATGAATGCCCGCTGTTGTTCTCCACTGAACAAGAGCTAGCCAAACACATAAAAATATGTCACCAAGCAGGTTGTTTAACGTGCGGTGAATGCGGCAGGAGTTTCCCGAGAAAAGTGGCCTTCGATCATCACACACAGATGCATATGGTGAGGACGTGTCGCAGCTGTGGCGCGCAGTTCACGAACCGAGGGTGTTACAGAGAGCACAGGATGCAGTGTGAGCCTGACGCGAAACCAAACATTGATAGTGTGCCTCGTGCTCGCCGCTCCAACATCCGCGACCCGGCGACCTACACATGCGACTACTGCGGGAAGACGTACTCGTCGAGGCCGCAGCTCAAGAACCACATCCTATGGATCCATATGGACGTACGCCCGCATCAGTGCCAGTGGTGTGGGAAGCGGTTCTACACGCCGGCTCGACTTGCCGAGCACACAGTGGTACACACGCGAGTGAGAAACTTTGAGTGCGACATCTGTGGTGCTAAATTGGTGACAAAAATGGCAGCGATATACCACAAGCGACGGCACACCGGTGAGCGGCCGTACAAGTGCGAGGACTGCGGGGAGAGCTTCATATCTTCCTCACGCAGATCCGAGCATGCCAAGCGGAAACACAATAGAGGCATAAAGCCGCAGTGCCATTTATGTCCGGCCAATTTTGTCAGGAAGCAAGAGTTGAAGAAACACATAGAAAAGAACCACCCGTGA
Protein Sequence
MSRQVDVKALVSHIVRGDGADKCRICMGDTSEGQVFLGDTVMMDGDKAVTLAELLELITGVEVAEDDDLPNGLCRKCSASAFNAAEFRTFCREASERWTTILGMLNMIPKNNSKNIYALILGNKISIYDNKMFKEPQEKAKEACPKVKSIKHKNYAKSLHCQCSTCGRNFMYANELHAHLKESMDLIQACYVCAKIMSREDLIKHLVQKHNKKPHPCKKCSTILNSFMQYKQHMVKEHGPGVCTCGDCGRTFQSTKAYHAHLSIHAPKNCPRCSKLFRNKKCYVHHVKKCCNLHKNRKEVHQTKHKLSILVKNKDRHIKVGLRGSADKECICDYCKKRFAGKKFVAAHIQIVHLKNTHRPCAYCGKLLAAAHMSSHMKKHQPSQSYKCSHCDIVLKSKLGYSQHLRLHTGERPYKCQYCGETFTASSRKSEHIRKTHKSTEEVGTSSVLPNKLCKLCMAHITAFIPFLLLCKVSAQRWDQITGMLKDIKVPKKAKSYYVLVLKDIRTYSSTRTAESEKDALQNLKTKITNRKSYTKRLAKEGRMTRMRDATKMTCPECKCVYTNIVKFNTHIKNINKRMCALCNVLIDLKTYEAHLNTHTGRVFSCNMCPEAFLKEKSLYLHKLKHKGDHVCLECKLSFVTSANLSAHLVIHQSQVCAGCGNKFNRICYTKHKQKCSFIEENRRFICDYCSKEYNRRTTLKLHIIHNHLTGKQFQCDQCGKTFLSRAHLVEHGNTHNKIPDRYVCSKCGTKFSTRRGHERHLKKHESGTYGVRSKKKTKYVCPICKKVREEPALPQGLCRSCSEQAMAAVRYRQLCIQSNQQWRDATVCLAQIHAAADDDKTFFVLYNGHMMIIKDQVARVPNETEAVKRINLRFTDPEPHRPPKRVKRSFPPVSCQCPDCGKSFSNTEFLNFHLKTSLKRSCQICGVVMPKKNLSKHLLEKHDISVVECSVCHSNFDTRQQLEQHSATSHGPDTYSCHCCGSGFSNHRALRAHMYSHTLFHCEACGASFENRKCYKYHQKQCKRSDGPQQDLYICDYCNIEYNRKPSLRIHMIQKHLNINPYVCQVCGKRASTLSHLKSHMKTHNATRSVYQCHCGAKMRTEVGYQLHQRIHSGERPYECETCGDRFLSASRRLDHIKRRHRGSADMPHACYKCSATFIRPWELRKHYVTVHNDIKEESLCPNTACVACASTALAAQEFRYFVQSSHNMWNKAITNLSGLPSTMSSPLKSLCVLITPNDMRVQTVKNYANGDAKTVLNRLKTGIGRKPFGRKPRTDRTGPSCTCPDCGKSFLSPHFLNMHLINSGQKEACVLCGDVVLRGQQMKEHMSAAHRTDLLLCNECPLLFSTEQELAKHIKICHQAGCLTCGECGRSFPRKVAFDHHTQMHMVRTCRSCGAQFTNRGCYREHRMQCEPDAKPNIDSVPRARRSNIRDPATYTCDYCGKTYSSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVTKMAAIYHKRRHTGERPYKCEDCGESFISSSRRSEHAKRKHNRGIKPQCHLCPANFVRKQELKKHIEKNHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-