Spin021483.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Sphinx pinastri
Gene Symbol
-
Assembly
GCA_947568825.1
Location
OX387640.1:1541517-1567975[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0014 0.12 13.5 0.5 1 23 468 490 468 490 0.97
2 20 2.1e-05 0.0017 19.3 1.3 1 23 520 542 520 542 0.95
3 20 0.00011 0.0089 17.0 3.0 1 23 549 571 549 571 0.99
4 20 2.5e-05 0.0021 19.0 0.9 1 23 577 599 577 599 0.93
5 20 4.3e-06 0.00035 21.5 0.1 1 23 605 627 605 627 0.98
6 20 0.00021 0.017 16.2 0.1 6 23 701 718 700 718 0.99
7 20 0.00021 0.017 16.2 0.1 6 23 792 809 791 809 0.99
8 20 0.00021 0.017 16.2 0.1 6 23 883 900 882 900 0.99
9 20 0.00021 0.017 16.2 0.1 6 23 974 991 973 991 0.99
10 20 0.00021 0.017 16.2 0.1 6 23 1065 1082 1064 1082 0.99
11 20 0.00021 0.017 16.2 0.1 6 23 1156 1173 1155 1173 0.99
12 20 0.00021 0.017 16.2 0.1 6 23 1247 1264 1246 1264 0.99
13 20 0.00021 0.017 16.2 0.1 6 23 1277 1294 1276 1294 0.99
14 20 2.2e-05 0.0018 19.2 0.8 1 21 1300 1320 1300 1325 0.95
15 20 2.2e-05 0.0018 19.2 0.8 1 21 1353 1373 1353 1378 0.95
16 20 1.4e-05 0.0011 19.9 2.2 1 23 1439 1462 1439 1462 0.96
17 20 0.0033 0.27 12.4 2.8 1 23 1468 1491 1468 1491 0.94
18 20 0.00033 0.027 15.5 1.8 2 23 1498 1519 1497 1519 0.97
19 20 8.7e-06 0.00071 20.5 1.2 1 23 1525 1547 1525 1547 0.97
20 20 1.2 1e+02 4.3 0.4 3 21 1555 1573 1553 1574 0.86

Sequence Information

Coding Sequence
ATGAACGCCTGTTGCTTTATATGCAACACCAGTGCTATGCGAAATGCTACAAATATATTTGGTTACCGTAACACATTGCAATCGGGCAAAAGTTTGCTGGAAGTGATCAGTGAGATTATAGACAAACCGTTGAAGGAGGGTGCAGTGCACTCGAAGCAGCTGTGCGCGAAGTGTTTCAAGTCGGCTTATGAATACGACAATACGGCGGTTAATTTACGAGCTATGAAAATGGCATTGATGAATCAGTTCAAAATCTCTTTATCGGAAAGCAATTTGAATTATGATACATACGAGGCAGATGTCAAGTCAAAAGTCCCAGTGAAAAGTTGTAATACCGAAAAGAAAATGGGCAGAATTGTATTACCCGCGTCGAAATTGCAGCCTTTGACACCGGATTTATTGTTGAAAGTGGGCAAATTGGCCAACGCCACTAAATCTAATTTCGTTTTTGATCAGAATAAGAACCCGCCAGTGTTAACAATAAACAACATGATGCAATCCCAACCAGAAACAACACAGTCCGAAAAGACGGACATACTGACAACACTAGCTAACTCCTTCAATGAGAATGTGATAACCTCTTCGAGCAGTGATATGAGGACTTTGAGCTTTAGTTCGTTGTCTAAAGACCCATTGTCGGATGACATGGATAGTTTGGAGAAAGATGTCAACGATGATGATGATACTATGGAGATTGATGAAGATTGTGCGCTATCAGTGGTTCCCGTGACGTCATCGAATGGCAATCTAGTCCTAGAAGTACAGGGTGTTAAGCGGCCGTCGAAGTCATCTGACTCGCAGATGATAGACGTCAGCGTGTTGCAGTCGTTGGACAATACTATCAGTGGAGACGACAAGTACATACTGGGCAAGCTGCAGATCATGAACGAGGATGATGAGGATGAGCATACAATAGTCCTGGACAGCAACGACGGGTCCATCCTGCGCATGGTGAGTGGGCAGCGCCTCGTGCTGGACGGCGGGGAGCTGGCGCTGATGCCGCACCACCAGGGCGACCACCACCACGACCACCACGACCACCACGACCACTCCGACCACGAACAGGCCGACAGTCAAGATTCGAATGATGAGCCTCAAATAGAACTGCAAGTGTCTGGCGATGAAGAAACGGCGAATGCTATAATAGCGGCAGCGCAGGAACAAGGATGTGCGTTCATAAAAGTGGAGTCTGGTGAGATGTACCGCGTGAAGTCGGTGCAGAGCAAGAGTCATGACACAAAAAGCATCTCGGCTCAGAGCATGGTCGAGAGAGTCGACGGCAAGTTCCGGTGTCTGCTGTGCGACAACAAGAACCACGGCAAGTTGGGCAACGCGACCCCAGCGCTGGGCGAGGCGGAGTGGATGATGCGGCACCTCCGCCACACACACGACGCCAGGCTCTACATCTGCCGCCTGTGTGGAGACACCTACCGGCGGCGGTCCGAGTACACCGCGCATATGGCGCAACACTCGCGCCACGTGGGGCAGTCGAAGAAGCCCGCCGTGGGGTCGACCCCCCGCGGCCCCCGGACCTCACGCGGGGCCGACCCCCGGACCCACGCCTGCCGCGCCTGCGGGAAGTCCTTCGCCTCCAAGTACACGCTCATTGCACACCAGAAGACTCATGCGGATCGACCACGGCCCTATAAATGTAAAGAGTGCTCAAAATCATTCCTCACGCAACAGAATCTAAACCAACATGAGAAGACACATTCGGGGATAAAAGATTTCATATGCAAAACATGTAACAAGGCATTCAGCACACAGCACAATTTGGAAGTCCACGGCGTGGTGCACTCCGGCGAGCGGCCCTTCGAGTGTGGCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGTGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGACTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCTCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGTACACACCACCCACTCACTCACTCACTCGCCTGCGGCAAGGCCTTCGCGAGACGAGCCGAGCTGCGCGACCATCTGCGCACGCACACCGGCGAGCGTCCGTTCTCGTGTGAGACATGCGGCGCGTCGTTCAGCCAGCGCTCCAACCTGCACTCTCACCGCCGCGCCACACCGGTACACACCACCTCACTCACTCACTCACTCACTCACTCACTCACTGACTGGTGTCCTGTCCTGCAGGCGAGCGTCCGCGAGCGTCCGTTCTCGTGTGAGACATGCGGCGCGTCGTTCAGCCAGCGCTCCAACCTGCACTCTCACCGCCGCGCCACACCGGTACACACCACCTCACTCACTCACTCACTCACTGACTGGTGTCCTGTCCTGCAGGCGAGCGTCCGTTCTCGTGTGAGACATGCGGCGCGTCGTTCAGCCAGCGCTCCAACCTGCACTCTCACCGCCGCGCCACACCGGTACACACCACCTCACTCACTCACTCACTCACTGACTGGCGAGCGTCCGTTCTCGTGTGAGACATGCGGCGCGTCGTTCAGCCAGCGCTCCAACCTGCACTCTCACCGCCGCGCCACACATCTCAACGAAAAGCGACACAACTGCACGCTCTGTCCCAAACAGTTCAAACGGAAGAGGTTACTAGACTACCATATAAAGGCGTCGCACACTGGCGAGAGGCCGCTCAAGTGTGAAGTGTGCTCATCAACGTTCGTGTACCCCGAGCATTACAAGAAACACATACGGTCTCACAGCGGCGAGCGGCCTTACGTTTGCGAGATCTGCGGCAAGACGTTCACGACGCGCGATAACCGCAACACGCACCGCTTCGTGCACAGCGACAAGAAGCCGTACGAGTGCATCGCCTGTGGCGCAGGGTTCATGCGCAAACACCTGCTCTACGAACACATGAACCACTCGATGTTTGGAACTGATGATCTCGAATTAGATTCTACAGACACTAAATCCATAATCGGTAAGAACGCTTTGAGCTTGCCAGACAACGAGGATCCGCTATTCCTTCAAGCTTTGACCGGCGACAGAGCGGAAGCTACTCTGCTCGAAGCGGTGGATGTCTCGCAACTGGAAAATGCTGAGATCGTAGACGAGAACGGTGAAATGATTCGTCTCATACAAGTGAAGCTACCGAGCGGCGACAACGGTTGGATGGCTGTCAACAACTAA
Protein Sequence
MNACCFICNTSAMRNATNIFGYRNTLQSGKSLLEVISEIIDKPLKEGAVHSKQLCAKCFKSAYEYDNTAVNLRAMKMALMNQFKISLSESNLNYDTYEADVKSKVPVKSCNTEKKMGRIVLPASKLQPLTPDLLLKVGKLANATKSNFVFDQNKNPPVLTINNMMQSQPETTQSEKTDILTTLANSFNENVITSSSSDMRTLSFSSLSKDPLSDDMDSLEKDVNDDDDTMEIDEDCALSVVPVTSSNGNLVLEVQGVKRPSKSSDSQMIDVSVLQSLDNTISGDDKYILGKLQIMNEDDEDEHTIVLDSNDGSILRMVSGQRLVLDGGELALMPHHQGDHHHDHHDHHDHSDHEQADSQDSNDEPQIELQVSGDEETANAIIAAAQEQGCAFIKVESGEMYRVKSVQSKSHDTKSISAQSMVERVDGKFRCLLCDNKNHGKLGNATPALGEAEWMMRHLRHTHDARLYICRLCGDTYRRRSEYTAHMAQHSRHVGQSKKPAVGSTPRGPRTSRGADPRTHACRACGKSFASKYTLIAHQKTHADRPRPYKCKECSKSFLTQQNLNQHEKTHSGIKDFICKTCNKAFSTQHNLEVHGVVHSGERPFECGACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPAARPSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPAARPSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPAARPSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPAARPSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPVARPSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPAARPSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHLTHSLTRLRQGLRETSRAARPSAHAHRYTPPHSLTHSPAARTSRDEPSCATICARTPVHTTSLTHSLACGKAFARRAELRDHLRTHTGTHHPLTHSLACGKAFARRAELRDHLRTHTGERPFSCETCGASFSQRSNLHSHRRATPVHTTSLTHSLTHSLTDWCPVLQASVRERPFSCETCGASFSQRSNLHSHRRATPVHTTSLTHSLTDWCPVLQASVRSRVRHAARRSASAPTCTLTAAPHRYTPPHSLTHSLTGERPFSCETCGASFSQRSNLHSHRRATHLNEKRHNCTLCPKQFKRKRLLDYHIKASHTGERPLKCEVCSSTFVYPEHYKKHIRSHSGERPYVCEICGKTFTTRDNRNTHRFVHSDKKPYECIACGAGFMRKHLLYEHMNHSMFGTDDLELDSTDTKSIIGKNALSLPDNEDPLFLQALTGDRAEATLLEAVDVSQLENAEIVDENGEMIRLIQVKLPSGDNGWMAVNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-