Spin007753.1
Basic Information
- Insect
- Sphinx pinastri
- Gene Symbol
- -
- Assembly
- GCA_947568825.1
- Location
- OX387627.1:3591490-3608067[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.8e-07 0.0013 19.3 1.0 3 44 220 254 218 254 0.93 2 5 3.8e-05 0.076 13.7 1.3 1 44 293 329 293 329 0.93 3 5 1.8e-05 0.036 14.7 3.7 4 44 365 404 363 404 0.89 4 5 1.5e-07 0.0003 21.4 2.1 3 44 529 569 528 569 0.97 5 5 0.002 4 8.2 0.8 12 43 607 638 598 639 0.88
Sequence Information
- Coding Sequence
- ATGCAATACGAATTCATTCCGAATCCGCGGAGGGGCGGAAGGGACCTGCTCATGCTGAACGGGTATACGTACTCCCAACATAAGCTGAGGTCTTACTGCTGCTCGAAGAAATATTCTGGGTGCAAAGCGCGCGTGAGGGTCTCCACAGATGGAACGCTGTTATGTTATGGTGATGCGCATTCTCACGAACCACCGAGATTCGCTTTGGTAGCGGGAAAATATGTCAAGCACAAAGCGAGGAATTACTACTGTTCGAAGAAGGACAACGGGTGCAAAGCGCGCGTGAAACTAGATCAGTTGGGCAAGATAATATTCGCTGATAAGAAAGAGGTTTATGATTGCCGCTTCATACCTACGAAGAAGGGTAAACCGTTGTTGATGGTAAATGGTTTTACGTTCTCCCAGCAGCATAACACGGTGCATTACTACTGCTCGAAGAAGGACGCCGGTTGCAAGGTTCGTGTCAAGTTGGATAAAGATGGCCGACATAGAGCATATTCATTTATATTCAACCGGCAAGGCAGTCGTTTGCTGCTGTACAACGGTTATACTTACTGGCAGCATGGCAGCTCTGGCATATACTACTGTTCCCAACAGAAGAGGCTAGGCTGCAGGGCCAATGTGAAGATCAAACAAGGCAGTCGAAAAAGGAGCTACCTTTGGAGGTTCTTTGAATCAGTGGACAACAATATGGTTTTTTGTAGGCTGTGTGATAAACTAATGTACGGGAACATGCAACGCCATCTTAGATGTATCCACCCCAAGGCTTACATGCGGTGGCAGAAAGAACTGAAACTGCAGAGACTTCGTCAGAAAGAACTTAAAGAAGCAACTGAAAGGCAAAGAGATAGTACATGTTTCGATGGAAGGAAAAGAAGTTCAATATGGGAATTCTTTGAGGATATGGGTTCTAACATATGCAAATGCAGGCTGTGTGGCATCACTATGAAGCACAACAAGTCTAGACATTTGGAGACAAAACACCCGATCGCTTACAAAAAATATCTGACCGTTAGTGAGACTTCAAAAGAAGTTAAAATCTCGGATAATGATATTTCTGAAAATCGTAACTGGGCACGGCCAGGTTGGGTCAAGCGATACCATAAAAGGCTTGATGACAGACGTTGTGAATGTACCATATGTCATAAAGTCCTTAGAATGCCTATTAGTGATAATAGCAGCATGAAAAGACATGTCCGTAAAAGACATCCATTTTATTATCAACGTGAAGTAGAAGCGTACAAAGAAGAACAAAAACAAAAAACAGATATTGAATCTGGAAAGTTTGAATCTATAGAGTATCTTGTGGAAGAGCTAGATTCTGATGATCCTTTGCTTAGTACTGAACACTTAATTCATGAAATAGAAAGAAATGAGACAATTGTAACCGATTCTGACAAAACCGATGCTGAAACAGATAATGAGGTAGTAGATGATGAAGTTTCTAAGGATCATAGTAAGATTGACCTAACCAAATCTATGGAATTTGAACCTTTGTCTCTATCCGATCCTAATATTGAAGAAAAAATCAAGGAGCTCTGCGTTAAAGATGTTCCAGGAGCACGAACCAAACATAAAACGTGTTTTTGGAACTTCTTTGTTGCAATCAGCAATCACTTATACAGATGCATGTTTTGTACAAAAGATATTGTGATATTTCCAAAGAGCGTTGCTAATTTGAAAAGGCATATTTCAAATATGCACCGAGAGCAGTTTGACCTCATACTCAAGTACGCGCCACAGTACGACAATTGCAAAAAGAGTAAACAAACTGCGTATTCAGTAGTAGAAGATGAAAGTAAAATGGAGTTCGAAGTGATGGACCACGGTTGTTACAAATGCAAGATATGTAACAAGTTTATCTTATGTGGTGATAATCTGCAGATGTTGTCAAGGCATGCCCAAGAGGCGCATGGGGCTGTACCATCCTCGGAAACTGACCCTGTAATAGTCGCTGACAGTTATGTTGTTGTTGGTATAGAGGAAGAACATGATTTATGA
- Protein Sequence
- MQYEFIPNPRRGGRDLLMLNGYTYSQHKLRSYCCSKKYSGCKARVRVSTDGTLLCYGDAHSHEPPRFALVAGKYVKHKARNYYCSKKDNGCKARVKLDQLGKIIFADKKEVYDCRFIPTKKGKPLLMVNGFTFSQQHNTVHYYCSKKDAGCKVRVKLDKDGRHRAYSFIFNRQGSRLLLYNGYTYWQHGSSGIYYCSQQKRLGCRANVKIKQGSRKRSYLWRFFESVDNNMVFCRLCDKLMYGNMQRHLRCIHPKAYMRWQKELKLQRLRQKELKEATERQRDSTCFDGRKRSSIWEFFEDMGSNICKCRLCGITMKHNKSRHLETKHPIAYKKYLTVSETSKEVKISDNDISENRNWARPGWVKRYHKRLDDRRCECTICHKVLRMPISDNSSMKRHVRKRHPFYYQREVEAYKEEQKQKTDIESGKFESIEYLVEELDSDDPLLSTEHLIHEIERNETIVTDSDKTDAETDNEVVDDEVSKDHSKIDLTKSMEFEPLSLSDPNIEEKIKELCVKDVPGARTKHKTCFWNFFVAISNHLYRCMFCTKDIVIFPKSVANLKRHISNMHREQFDLILKYAPQYDNCKKSKQTAYSVVEDESKMEFEVMDHGCYKCKICNKFILCGDNLQMLSRHAQEAHGAVPSSETDPVIVADSYVVVGIEEEHDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -