Basic Information

Gene Symbol
-
Assembly
GCA_947568825.1
Location
OX387639.1:5182814-5186844[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.026 38 5.1 0.1 1 13 73 85 73 91 0.87
2 7 0.088 1.3e+02 3.4 0.0 23 45 340 361 311 362 0.89
3 7 0.0014 2.1 9.2 0.1 22 43 437 457 418 460 0.79
4 7 0.0028 4.1 8.2 0.2 22 46 566 600 554 600 0.74
5 7 0.0049 7.2 7.4 0.1 3 45 650 701 648 702 0.80
6 7 0.87 1.3e+03 0.2 0.1 23 39 828 843 811 844 0.82
7 7 0.026 39 5.1 1.0 2 15 1001 1014 1000 1018 0.88

Sequence Information

Coding Sequence
ATGGAGCAAGTGGTGGTCAAAACGGAGATGCAGAACAATGGGGAGATATTATTGTTTTATGTGGATGAAAATGGTGAAAATGAAGAGGGTGTGCTCACAACAATTGAAAATATAGAAAATCCTGAAATACAGTTGCAACCTGATGATTCATACATTATTGAAGAGCAAGATGGAACTACCTACGAGTTATCACAGTCTAATGAATTTAGTGCTACAAGGGAAAGATGGACTGAGGAAGAAACACATAGACTGTTAGTCTTCTACAATGACAATAAACAGACATTCCTCACTGGTTCCACGAAGAGAAAGCATTTATGGGCTATAGCTTGTAAAACCATGCTAATGAACAAAAATCCTACAGCCTGCGACATGAAACTAAGGAATCTGAAGGCAAAATATATAGAGATATGCAAAAATATGAGCAGTGATTTAAGTGACGCAATTCTAAACTTATGTCATCAGGCTTTTAGTGATGATCCATATTTTAAAAGTATGGTAGCATCCACTAGTGAAGAAAGAGATATTAAACTTCCATTTACACAAAAAATGAATGATGGTATTGTAGTCCTCAAAAAGGTGAACACTAACAAATCAATAGACGAAAAAGTTGAAAAGATGCTTCAATTGTACATTAAAAACAAAGAGAACTTTCAAAAGGAATACTTTACGAGGAATTTATGGGAAACTATTGCTTTGGAACTTGGAGAAGAAGATGGCTTGTATTGGCAGAAGCGTTTTCTTAATTTCAAACAGCATTACATATGCTTACTTGAGAAACGTAAGGATGGGATTTGTGAAATCAACTGGCCGTATATGAAGTTATTTGACGAGATATTTAAAGATGACGATGATTTCAGTAGAAAGTATCCTTTTATCGTAACTGAAGTTCCAATCGAAGCACCAGCTCCTACTAACCATGACTATGATTGGCTGGAGACAGAGAAAATGGTGTTAGTCAAATACATATACGACTGCTTTGATGATTTCAAAGATCCTAAAATACCAAACCATTTCCTCTGGATGGAAATAGGCAGGCTTCTAGACAAGAGTCCAGAAGTTTGCAAAAGCAAGTATATGGAACTAAAAGAAGCACATTTCAACAAGTATTTGGAAAATGTTTACGATTTGCGTGAACGTAAACCTTTAGATATTGTCTTAGATTACATTGTGTCGAAAGAAACAGAAATGCAGCTGACGAAGGATGAGCCAAACCAAGTAGTGGTGCAGAAGGTTGAAGAGATTGATGAGATTGCTCAGTTTCTGTATGAAAATGTGGAAATGTTTAAGGACCCTATATGCTATTTCGTATGCTGGGGAGTAATAAGTAAAAAATTGAAGAGGTCTGTCGTTAGCTGTCGGAAACAATGGGAAGAGCTAGTCACCCTGTATAAGAGCATACTGAATGATAAAAAAGAATATCCTGATATGCAAATAGATTGGAGGTATATAGAGCTGTTTGACAGAATATTTGATTACGGAATGGACACAAACTTGCTTGAGGGATACGAGAAAACTAAGGAGACTAAGGACTCTGAAAAAATTGGCGTGAGAAAAGTAAACATCAATATGAATGAAACTGAATCTAAGCCGACTGATGAGGATGAATTTGATGAGAGAGGCTTTTCAAAGGGCTCAAAACGGACCGGAGACTCAAAAGCGTTCAAAATTCTCGAGTATTATCAAAAGAATAAAGATAAATTTTCAACAACAAACCGAAACAAGCATAGTCTTTGGGAAGTATTGGCTAAGCAAATAGGCATATCGGCCACCCAATGCGCCCACAGATTCAGAAACCTGAAACAAGTGTATACAGCATATGTTCAAAGAGAAATAAATAAACCAGAAATGCCAATAGTTTGGCCATATTACGCACTCTGCAAGAAAGTCTTTGGTTACCGGGCAATAAAAGCTAGATTGAAAAACGGTAAAAATGATTCAGACACTGAAGAATGGTCTGGTAAAGAAATAAATCAATTGATAAGTTATTTCGCTGATCATTTTGATGAAATATCAAACAATGTTGACGACATGAGCAAATGGGCTGTTTTGGCTAGAAATTTAGACAAATCTAAAGTAGCTTGCAAAGACAAATTTATGGAGTTACGTAAATCTTACAGGAAATTAAAGACGCAAATCACGAGGAATCCTAATGTAAAGATTTCTTGGAAATATTTCAATACGTTTGAAGAGATTTACAATAATAGAGAGAAAGTTAATCATAGTGCGATGGAGGTTGATGTACATTATGAGGATGGTAATGAGCCAGAAGATGATGACTACCAATGCGTAATAGTTGTTTCGGAGGATGGAGTTATTACGAATATTGACGGTTCTCAAGTAATTAATGAAACTGCAGAAGAACAACCAACTGAAACAAAACCGCCAACGAAATGGCCAAGGCGCATCAAAAAACGCCTGCTAATATTGTACATAAATTACATAAGAGCAAACAAAGGTAAGGAAATCAACGCAAAAGAAATGTGGCAAGAAATAGCGACTAAATTGGACAAGAATCCTGTTGCATGCAAGAAGATGATAATAAGACTCAAAAATCTTTATAATAAAAATGTTGCTGATCATGAAGATGCAGAAAAGAAAATTTCTCCATTGTTCCGTTTGGTTGAAAAGGTTATGAAATTAAAACCGAAGTTTGTAAAAGTTGATAAGAATAAAACACAACAAGAAAAAGTCTATAAAGATGTTCCAATGGATGATGTGAGTGTACACAAGGCTTTACAATATTATTTACTACATATTGAAGACTTCGTCAATCCCAAATTTGAAAAGAAATTCTTATGGACTGAATTGGCAAGTTTTATATCTGAACCGGTCAATAAAGTTTTTAATAAGGTCAGTTATTTGAAACAAGCGTATAATAATGATCAAATTACCGAAGATAAAGCGCAGTTCGTAGATGCGTTGCGAGAGATCGCAGCTAAAGAATTGGCAATAACTCTTATATCGGACATTGAAAATGCTGCTGTGAAAGAGTATCCAGAAAAATCGTGGACTGACGAAGAAACTGAACAATTGTTGCAATGGTATTTAAGCAATTTGGACAAGTTCAAAAATCCAAAATTCGTACGAAGCTACCTTTGGATTGAGGCGTCTAATATTTTAAAGAGGAGCCCCTTAGATTGTTCTAAGAAAATGTCGGAAGTAAGGACCCTATACCGCAATATGGTGAAGGAAAATTCCGAAGAATTGGGCGACTGGAAGTTTTATGACTTGTGTCAGAAAATTTACGGAACGGGAAAGAAAACGAATCCTATGAACGCCTAA
Protein Sequence
MEQVVVKTEMQNNGEILLFYVDENGENEEGVLTTIENIENPEIQLQPDDSYIIEEQDGTTYELSQSNEFSATRERWTEEETHRLLVFYNDNKQTFLTGSTKRKHLWAIACKTMLMNKNPTACDMKLRNLKAKYIEICKNMSSDLSDAILNLCHQAFSDDPYFKSMVASTSEERDIKLPFTQKMNDGIVVLKKVNTNKSIDEKVEKMLQLYIKNKENFQKEYFTRNLWETIALELGEEDGLYWQKRFLNFKQHYICLLEKRKDGICEINWPYMKLFDEIFKDDDDFSRKYPFIVTEVPIEAPAPTNHDYDWLETEKMVLVKYIYDCFDDFKDPKIPNHFLWMEIGRLLDKSPEVCKSKYMELKEAHFNKYLENVYDLRERKPLDIVLDYIVSKETEMQLTKDEPNQVVVQKVEEIDEIAQFLYENVEMFKDPICYFVCWGVISKKLKRSVVSCRKQWEELVTLYKSILNDKKEYPDMQIDWRYIELFDRIFDYGMDTNLLEGYEKTKETKDSEKIGVRKVNINMNETESKPTDEDEFDERGFSKGSKRTGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEVLAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPIVWPYYALCKKVFGYRAIKARLKNGKNDSDTEEWSGKEINQLISYFADHFDEISNNVDDMSKWAVLARNLDKSKVACKDKFMELRKSYRKLKTQITRNPNVKISWKYFNTFEEIYNNREKVNHSAMEVDVHYEDGNEPEDDDYQCVIVVSEDGVITNIDGSQVINETAEEQPTETKPPTKWPRRIKKRLLILYINYIRANKGKEINAKEMWQEIATKLDKNPVACKKMIIRLKNLYNKNVADHEDAEKKISPLFRLVEKVMKLKPKFVKVDKNKTQQEKVYKDVPMDDVSVHKALQYYLLHIEDFVNPKFEKKFLWTELASFISEPVNKVFNKVSYLKQAYNNDQITEDKAQFVDALREIAAKELAITLISDIENAAVKEYPEKSWTDEETEQLLQWYLSNLDKFKNPKFVRSYLWIEASNILKRSPLDCSKKMSEVRTLYRNMVKENSEELGDWKFYDLCQKIYGTGKKTNPMNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00859414;
80% Identity
-