Smar031920.1
Basic Information
- Insect
- Sphenella marginata
- Gene Symbol
- pnr
- Assembly
- GCA_951509765.1
- Location
- OX608080.1:104794253-104800892[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.3 1.8e+03 0.2 0.3 22 28 271 277 268 279 0.73 2 2 3.5e-16 2.1e-12 48.0 2.4 1 35 877 910 877 911 0.98
Sequence Information
- Coding Sequence
- ATGTGTAATGTACCACCTAAGTTCTTTCAAGTTTGTCGTTTATGCCTTACTTTGGTCAAAGAGCATGACGTTGAGGTGCTGCAAATATTTAATTCATCAACATCATCAtctgcagcagcagcagtcgTCCCAGCTACAGCCACAGCTACGACCACGCCGACGACAACGCCAGTGCCGTTTGTCACTACTGGAAATAAAGCAAACGATGGAGCTCCTGCAAATACCCCCAGCCAACAATTTCATCATCATCAGCAACTGCAACTACAACATCATCACCAACTTAATGCTCATACGCATCAATTTGAAAGGCCACAAAATAGCTGCAGCAGTAGTAGTACAAAAAATGATTGCAGCTCTGTTGATAACCTATCTGTATCCACCCCTGTATCCATTTTTAAAAGTGAGGAAGAGATGCCAGATAATAATATAAGTACACTTGTGCCGTTTGTGCCTTCTAATATTGCTGTATCTGATAATTCTACATATGGAATCACTCAATTGTTGTCTAAATCATTGGAAAATAGCAAAGTGGGGGTCTTTCCAACATCTAATCCACAAATACAAGTGAAAAATGCCACACATGTTAAACAAAAGATTACAGTATTGCCTTCGTCGTCGTCGTCCAATGATAACGTAGAAGAAGGCAAAAGCAACAACGATGGCAGCAGCATGTCAGTGGAGGAGGAGCAGGAGGAGCAGGAGGAGATGTGCAAGAAGGCAAGCCATGATGATTCATCACCACACATTACCATTCAAATACTCAGCTGTCTCTCTATAAAGATTTTACCGGATGATGGGCTGCCCGCTATTGTATGCAATAACTGCAGAACACAATTGAATGCATTTTGGAACTTTCGATTGATGGCTCAAAAAGCAGATTTTACGCTAAAGGAAATCACGAAATTTTCTAAACAGaatTCTATAGAAAATGAGACACAGCGATTACCAAGCATTTCAAAATCACCACCATGCAGCAAGTCATCGTCAGAAAGGATGGCAGCGAAAGCTTTAACCGAGTTAAGTAAGTCATCCAAaggtttttttggaaattataatAAACCAATAAATGTAACTGCCGAACACTTGATTGAAACGTGTGCAAGTGTGGGCTCAACAAAAATTACTAAAACGCTACAGCAACACAAATCGAATATAAATGAAGATATTGCTGACGACGATGACGATAAAAATGATAATATTTACAATACGGCATCTTGTTCGTCGAAAACTCCGCCCACAATGAGGAAGCAACTACGAGCACTCTCACCAACGCTTAAGCCTGCTCCACCACCGCTGCCGCCGCCTAAAACATCAAATGAACATACAAAATGTTTAGTTACACATAATATTGTACCGCagccaacaataacaacagcaggTGCATCAGTAGATGTATTAGAAAGTCGTATGGATACGACGGTCTACTATGCTCCTAATGATAATTCAATAAATTATGATGGTCTCATATCACCGAATAcgattgcaaaaaatttaataaatatgaaaaatgacaatTTACCCAATATTGAGAAGATAAGAAATCTACAACAAAAGCTAGAAACGGCTGCTGTGCTTATGGATATTAgtaaaaaagtgattatatCACCACCATGCTCGAATCGTCAATCTCCAAATTTACCCACAATGCAAATAGCAACAACGGGAGCAGCAAacccaacaacagcaacagatGAAAGTATTAAAAATTCTGTGATAAAAACTGAACGTCCATCAAATAATGAAAAGACAACTGTAGATGCCGGTACAGTTACAGttacaacaacaccagcaacaCAACAAACAGATGGCAAAGAAATAGACTTATCAATTAAAAAACCGAAACATGAATTCTCAAACACTCAACAACAAACAACTACAACTGTATCTCAATTATTACATTATGCTCATCCTACAATACTcgaattacaacaacaacagcaacaaccccATATACAACAACCTGTAAATTTAGATTTAGAAACTACAAGTATTATTAAAGGAGAAATTGAGAATGAAAGTAGACCTTGCAGTAGCACTACTACTCGTTTATCAATATCAATACCAAATAAAAAGGATACACAAACAGCAGGAGCAGTTCTATACACAGATTCGGATGATAGTTCCGACTCAAATCGTTTAGAAATGGATATGAGTTCGATGTTAAATGAGCGCAAAACGCCGGATAGTATAACATCGGAAGAACAAGTAACAGATATAGCAACTACACAATTGTGGCAGGCGCTCGCCAGATCAGCCGCAAATAATGAGAATAACCAGCTACTACGGCATATGATACAAAGATCGCTTGTATTTCCGCCGCCTCCTACAGCAATTGCCTCTGAGAATGTACCTGAGCAACCGATGGCATTGTTAAAGAATGATAATTTAAGTAAATTGTGTCGTAGAAAACAAACATGTCCGACGAAAAATGATGTAATTGAACAATTGCCGCCAAACATTATATCTGTTAATACGCAAAATCTGGAAATAAATGTTAGTACGCATAATCATATTGCTGTTGCAGCTGCAGCTGCGGCAGCTGCTGCATCAATGCAAGATAAGAAGAATAATAAGAATAACAGCCCAAGTTCAAGCGCCGGTATAATCAACAATCCAAAAGATATGTCGTGTTCTAATTGTGGCACTTTAACCACTACTATTTGGAGGCGTAGCATACGTGGTGAGATGGTATGCAATGCTTGCGGATTGTACTTTAAATTGCATGGCGTAAATAGACCACATTCGATGCGACGCGATACTATACATACGAGGCGGAGACGTCCAAAGGAatctgaaaaatcaaaaaagaaAAACAAAAGAGCAAGCTCTCCTTCCGAAGTTATATGTAAAATGCCGATTTGCGGTGCAAGTGGCACAGGTGTCGAGCTCAAACAAAATGTGTTCTTAGCTGTCGAAAATCCGGAAACATCTGTGTTTTCCTTCgctAAATACAAGCGACACATAGATGAGGAGCAGGCAAAAATCATAAAAGAGGGCTTATTGAAGAAAAGGAAACTGCAGCAAGGTTCAATTAAAAGCGATTTCAACCAGGTGGACGATTTTTTAGTACCTCTAAATCTCGTCTCCAGTGAAAATAATACCAATAAGTTAACATAA
- Protein Sequence
- MCNVPPKFFQVCRLCLTLVKEHDVEVLQIFNSSTSSSAAAAVVPATATATTTPTTTPVPFVTTGNKANDGAPANTPSQQFHHHQQLQLQHHHQLNAHTHQFERPQNSCSSSSTKNDCSSVDNLSVSTPVSIFKSEEEMPDNNISTLVPFVPSNIAVSDNSTYGITQLLSKSLENSKVGVFPTSNPQIQVKNATHVKQKITVLPSSSSSNDNVEEGKSNNDGSSMSVEEEQEEQEEMCKKASHDDSSPHITIQILSCLSIKILPDDGLPAIVCNNCRTQLNAFWNFRLMAQKADFTLKEITKFSKQNSIENETQRLPSISKSPPCSKSSSERMAAKALTELSKSSKGFFGNYNKPINVTAEHLIETCASVGSTKITKTLQQHKSNINEDIADDDDDKNDNIYNTASCSSKTPPTMRKQLRALSPTLKPAPPPLPPPKTSNEHTKCLVTHNIVPQPTITTAGASVDVLESRMDTTVYYAPNDNSINYDGLISPNTIAKNLINMKNDNLPNIEKIRNLQQKLETAAVLMDISKKVIISPPCSNRQSPNLPTMQIATTGAANPTTATDESIKNSVIKTERPSNNEKTTVDAGTVTVTTTPATQQTDGKEIDLSIKKPKHEFSNTQQQTTTTVSQLLHYAHPTILELQQQQQQPHIQQPVNLDLETTSIIKGEIENESRPCSSTTTRLSISIPNKKDTQTAGAVLYTDSDDSSDSNRLEMDMSSMLNERKTPDSITSEEQVTDIATTQLWQALARSAANNENNQLLRHMIQRSLVFPPPPTAIASENVPEQPMALLKNDNLSKLCRRKQTCPTKNDVIEQLPPNIISVNTQNLEINVSTHNHIAVAAAAAAAAASMQDKKNNKNNSPSSSAGIINNPKDMSCSNCGTLTTTIWRRSIRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKESEKSKKKNKRASSPSEVICKMPICGASGTGVELKQNVFLAVENPETSVFSFAKYKRHIDEEQAKIIKEGLLKKRKLQQGSIKSDFNQVDDFLVPLNLVSSENNTNKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00993164;
- 90% Identity
- iTF_00993164;
- 80% Identity
- -