Smar014006.1
Basic Information
- Insect
- Sphenella marginata
- Gene Symbol
- pnr
- Assembly
- GCA_951509765.1
- Location
- OX608079.1:17339656-17344725[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.5 3e+03 -0.6 0.1 1 5 448 452 448 458 0.83 2 2 2.9e-17 1.7e-13 51.4 10.1 1 35 500 533 500 534 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCACAGACACAGCAACAATTGCATCAACAACAAATCgttaaacaacaacagcaacaacaggtgcaacagcaacaacaacaacatatattGCTAAATATCAAAACGGAAAAGATTAGTGGTGAACCGAAAGTATCCTCAGCTTCGACAACACAGCAACAATCTGCCGCCCTTGAGGAGCAACAACAAGTTGCACAAGATTTACAACAAACACAGAGCGCACAgcaaacgcaacaacaacaactttctAGTCAAGCAGAAGCGTGCCAACAGCAAGAgcgccaacaacaaaaacaacaacatccaCCAACAACTGTGGCCACATCATCGGTTGGTACAATTAGTTCTAGTTCGCAACAACAATCCAGCGAGGACTATAGTATACCATTGCCGCGTAGCACCCAACAACGACGCATCTTGACCACAGCTGGCACATTAGAAGTGAATGATGGTCGTGAGAGTGATCAACCTGAAAGCCAATCCgaatatcatcatcatcactcACCTAATGATTATGTGGTAATGGCACCACGAAATGACGAACATCCACCACCAGGCACCGCCGTCTTCACCTACACAACGACGGAGAATGGCCAACAAATTATTTGCACTGAAACTGGTGCCACTATCAAACTCGAGGATATTGAGAAAGATCACCAAAGCAGCACCGAGGCgtcacatcatcatcatcatcaacaacaacagcaacaacaacaacaccatctGCAACAACATCATCAACAACTTTGTCCACCAAGCGGCTATGGTGATACTATTGTTGTATCAGCGGCAGCATTGCATCAACACCAAAATCCACATGGCGTCATCACGGCTTCCGCACATGGTGGACATCCGGGTGCGCCATTACGTTTCGATCCTGATGGTCGTTATAGCAGTGTGCTGCAGGATAACGGCAATGGACAGACAATTTATTATGATGCTACCGTAGTCGAGTCGGCTGCACATGCGAGCGAGGCTAAAACATTTACTGATTTAGGTAGTTCAGAGTACTATGCGGGACCGTCAGCCTATGCGCTGCCACCACATAATAACGGCATTTATAGTGTTTCTGGGCCAGCTCaattaatttgtaaaacagATCCGAATTTGGGTGCTATGCGTCAAGCGGGACAATTTCAATCGTTAATTGAACCGAATGTGCAAGAGCAGTCAATGTGGGCGCCTTCGGGCGTCGAATTCTCTGGATATAATACATATCATCATCAGGTAGTTGATGACTACGGCACAAGTAATATGACGGCGACGCATTGGCCTGGTGCTGGTTCAATTGCCGCTTACGAAACATCGTTGGGTCCCGCACTCTATGACACACCCAAATGTGAGAATTGTGGTGCACCTTATATACGCAAAGGCAATGATTTTTATTGTTCGACGGGTTGCAATCAATTACGTGCGACGCATGTACGTTTGCCGGTGCGTCAACCGAAACAGAAAGTTCCCGCCAATGCCAATACGAGACGTACCGGTGTTACATGCGCCAATTgcaatacaaatacaacaacattgTGGCGTCGTAATAACGAGGGTAATCCGGTGTGTAATGCATGCGGTTTATATTACAAGTTACATAATACAAATCGTCCACAATCGATGAAAAAGGATGGCATTCAGAAGCGCAAGCGTAAACCAAAAAACAATGGCGGTATGACGACCATGAAACCATTACCATCTCTTCCAGGTATGCCACAGAATATGACGCTTATGACACCCAACGGTACAATATATCCCTCTCAAGTGTCCGCGTTGAGTTTGCCCATGAATAGTGGCGATAACGGCAATGGTAGTGGCGCTGGCACATCATCCATGCATGGTGAATTACATGATATGTCTATGAATAgcagtggtggtggtggtggtgtagCTAGCGCGGGCGCTGGCTCCATTCCGAGCGGTAACATAGGTGGCACTGTGGTGGTGGCAAGTGGTGCTGCTACTTCTCTTACAAACACCGGACCGCGCAACAACGTCTCAATTGTGAATCATGTTACCGGTGACAGTCACTCGCCATACAGCAATCCACCGTCGCAAAGTCAATCGCCACATTTGTCAAACCCATCGCCACTTAGCCGACAACAAATGACGCAAACTGTGCAACCGTTAGAAGCCACACGTCCCACAAACAGTGAAATACCAACCAGCGTCATAACGCGCACTGGACTACCCGAACGTTCCTCGAATAATTGA
- Protein Sequence
- MEAQTQQQLHQQQIVKQQQQQQVQQQQQQHILLNIKTEKISGEPKVSSASTTQQQSAALEEQQQVAQDLQQTQSAQQTQQQQLSSQAEACQQQERQQQKQQHPPTTVATSSVGTISSSSQQQSSEDYSIPLPRSTQQRRILTTAGTLEVNDGRESDQPESQSEYHHHHSPNDYVVMAPRNDEHPPPGTAVFTYTTTENGQQIICTETGATIKLEDIEKDHQSSTEASHHHHHQQQQQQQQHHLQQHHQQLCPPSGYGDTIVVSAAALHQHQNPHGVITASAHGGHPGAPLRFDPDGRYSSVLQDNGNGQTIYYDATVVESAAHASEAKTFTDLGSSEYYAGPSAYALPPHNNGIYSVSGPAQLICKTDPNLGAMRQAGQFQSLIEPNVQEQSMWAPSGVEFSGYNTYHHQVVDDYGTSNMTATHWPGAGSIAAYETSLGPALYDTPKCENCGAPYIRKGNDFYCSTGCNQLRATHVRLPVRQPKQKVPANANTRRTGVTCANCNTNTTTLWRRNNEGNPVCNACGLYYKLHNTNRPQSMKKDGIQKRKRKPKNNGGMTTMKPLPSLPGMPQNMTLMTPNGTIYPSQVSALSLPMNSGDNGNGSGAGTSSMHGELHDMSMNSSGGGGGVASAGAGSIPSGNIGGTVVVASGAATSLTNTGPRNNVSIVNHVTGDSHSPYSNPPSQSQSPHLSNPSPLSRQQMTQTVQPLEATRPTNSEIPTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00993163;
- 90% Identity
- iTF_00993163;
- 80% Identity
- -