Basic Information

Insect: Sphenella marginata
Gene Symbol: salm
Assembly: GCA_951509765.1
Location: OX608080.1:2279051-2301039[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 7.1e-06 0.0011 20.8 0.9 1 23 614 636 614 636 0.98

2 7 1.4e-05 0.0022 19.9 2.1 1 23 642 664 642 664 0.98

3 7 0.024 3.7 9.7 1.5 2 23 1031 1052 1030 1052 0.98

4 7 1e-07 1.6e-05 26.6 0.5 1 23 1058 1080 1058 1080 0.98

5 7 0.00031 0.048 15.6 2.3 1 23 1090 1112 1090 1112 0.98

6 7 0.052 8 8.6 3.1 2 23 1559 1580 1558 1580 0.97

7 7 5.3e-08 8.2e-06 27.5 1.4 1 23 1586 1608 1586 1608 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	7.1e-06	0.0011	20.8	0.9	1	23	614	636	614	636	0.98
2	7	1.4e-05	0.0022	19.9	2.1	1	23	642	664	642	664	0.98
3	7	0.024	3.7	9.7	1.5	2	23	1031	1052	1030	1052	0.98
4	7	1e-07	1.6e-05	26.6	0.5	1	23	1058	1080	1058	1080	0.98
5	7	0.00031	0.048	15.6	2.3	1	23	1090	1112	1090	1112	0.98
6	7	0.052	8	8.6	3.1	2	23	1559	1580	1558	1580	0.97
7	7	5.3e-08	8.2e-06	27.5	1.4	1	23	1586	1608	1586	1608	0.99

Sequence Information

Coding Sequence: atgaaaaaccaTATATCAACTGTATTGTGTGAAATGCGTAGTGATTTTAAAGATAATCATCAAGAAACGATCAATAAAATGATACAATTTGGCACCGTTAAATATGGAATCGTCAAACAGTTGAAAGATCGTGCGCGCAGCACAGAAAAAGATGAAACGAGCGACCAGGAGGAGAATGGTGCTTGCTCTCCCGTCGCCAGTCAAGAAGTGGCAAACAACATagctaaagcaacaacaaacaccacAGCAACAACGGATATGGTGGCCGCGCCGACAAACTGCGCAATTGGTAATGATTTGTCCATTGCCGCACAAGCGCAAGATCGCTCACAAAGCGCAACCGATGTGGCTGAAAATCATACAAAAACAGAAACTGCTGCAAGCGACATTGCAGTCACCGAAGATCACAATCACAACAACACTAGCAACAGCAATAGCAGCCTCAATAATGTGGCCATAACTGCTGGTGCATCACCAACGAGACTAGAAGAGGCGCGCGGCTCAACACCCGTGGAGCGCTTACTACAAATGACATCAATTGCCAAAGCGGCAGAGCTGGAAGTTAGTGGCGTCGGCAGCACAGCGTCAGCAATTAGCGCTGCCAACTCGCCAACGTACAACACATATCTGACTGATAAAACCGCTGTGACTAACAATAACAAATTTGGTTCACCCACACCAATGGACACCGAAGAGCAGGAACAGCCCCTCTATGCATCGGCTGGCACGATGCGCACAGCAACAGTGCAAGGTGATGGTGAGGAAGAGGACGCAGAAGAGCAGCAAGGCGTACAGGAAGCACCATCAGCAGCTGAATTAGATGTGAAGCAACCCACAAGCGAGACGGCTGCTACTTCACCATCAGCAAAGCCCAGTGGCTCCGAAGAAGCGGCAACCGAAACGGATGCTGTAATGGCCACTACTTCGGCACCACCGACACCCACCTTGAGCGCGCTTACAGCCGCTGGCGGCTTACCACAAGCGGCCGCTGCATTTGGTGCTGCCCCTGTCAATCTGGAGGCcatacaaaatatgcaaatgGCTATTGCACAATTCGCTGCCAAGACCATTGCGAATGGCGCGCAGGGTGGCGATAATGATGCGGCAATGAAACAGCTGGCATTTCTACAGCAAGCGCTCTTTAatctacaacaacagcaactctTTCAAATACAACTCATACAACAATTGCAATCGCAATTGGCCATGCATCAACCGGCAAAAGGTGCTGGCGAAGGTGAAGGCGATGTGGAGGAGATGGAGGAAGAGGTTGAAGATGGCGAAGAGGACACATATGAAGAGGAAGAACGCATTGCGGAAATGGAGTTGCGTCAGAAAGCTGAAGCGCGCATGGCTGAGGCGAAAGCGCGTCAACATCTAATCAATGCTGGAGTGCCGTTGCGCGAGGAGAAAGCGAATGGCACGCGCGCTGCCACTGCGTCAACGCCAGCCAGCGGCACAACCACCACAGAGACACTGAAACGCAAGCGCGAAGATGACAATGATGAGTTGAATGTGGCTAGTAGGCGCATGAGCTTGGATGTGAGTCAAAGCGCCGCCACCCGTCTTAAGGAGCAAATGCCGACAACATCGGATGCGCTGAGTAAATTGAAGGAGATGGAAAATATGCCACTGCCATATGGCACAGATCTCGCTTCCAGTATAATCACCAACCACGACGACTTGCCGGAACCGAATTCTTTGGAGATGTTGCAGAAGCGCGCTCAAGAAGTGCTGGACTCCGCCTCACAGGGCATACTCGCCAATAACATGGCCGATGAGTTTGCATTTGGTGACAAGAATGGCGATGGGAAGAACCGCAATGAGCCATTCTTCAAGCATCGTTGCCGTTATTGCGGCAAAGTGTTTGGCTCGGACTCGGCGCTTCAAATTCACATACGCTCACACACCGGCGAGCGCCCATTCAAATGCAACGTTTGCGGCAGTCGCTTCACCACCAAGGGCAACCTGAAGGTGCATTTCCAACGGCACGCCCACAAGTTCCCGCACGTACCAATGAATGCCACGCCCATACCAGAGCACTTGGACAAATTTCACCCACCGCTGTTGGACCAGATGTCGCCGGATAGCTCGCCAACACATACACCGGCCGCGATGCCACAGCAAATGCCACAACAAATGCCGCCTGTCTCGCTGCCAATGTCCTTTCCACCCAGCGCTGCTTTTCCCGGCTTGTCCGGACTTTATCGCCCACCAATGGAACTTTTGAAATCGTTAGGTGCAGCTGCAGGAAATGTCGGCTTTCCTAACCCATTCTTTCCACATATACCCAGCACGGCAGAGCTGCGCCCAGAGGTACCATCAACGCAAACCGCTAGCAAGGAGAAAAGTAGCGATGTTCCAACTGATTTACGCAAGTCATCGGCCTCGAATTCACCCGTGTTGACAGTGAAGACTGAGATCATGGAGGAGACAGAGGAAGACCAAGCAGATAAGCAGCCAGCGACAGAGCCAGCAGAGAAAGCGCCAGCATCAACAGCTGTGGACCCACCAACGAACGCATCACCTCCGCTAAACATCAAAATCAAGGAGGAGCGCATCGATGTCGATTTGCAAGACGAAGAGATTGAGCGTGCGAATACCCCACCGGCGCGTCTGTCGGCATCACCCGCACCCGTCACGACATCGCCCGCACAATCGTGTGCCAGCGCGCCTTTCACACCACCAACACCCACCTCAAGGCCAATAGCGCTGCCACCGGTTGTACAGCCGGCGCAGCCGCCTATTATCATGCATCCACACCCTTCACCTGGCACACACAACCATATCGATCATTTACCCACACCAGGACAGCTGCCACCTTCCCTGCATCATCGTGATGATTTCTTTGCGGATCGCTTCCCTTTGAACTTTACCAAAAACCTCTCACCGGAGCATCATTCGCCCATACGTTCACCGGCTCATTTGCAGCGTTCGCCGTTCTTCAATCCAATCAAGCACGAGATGGCGCTGCTGCCACGTCCGCATAGCAATGACAACTCATGGGAGAACTTCATTGAGGTCTCAAACACATCGGAGACGTTGAAGTTGAAGGAGCTAATGAAGAACAAGAAACTGACAGATCCCAATCAGTGCGTCGTGTGCGACCGTGTGCTGTCGTGTAAGAGCGCACTGCAAATGCATTACCGCACGCACACAGGCGAACGGCCCTTTAAGTGTCGCATCTGTGGGCGCGCTTTCACCACCAAAGGCAACCTCAAGACTCACATGGCCGTGCACAAGATTCGACCGCCCATGCGCAATTTCCATCAATGTCCTGTCTGCCACAAGAAGTACTCGAACGCGCTGGTGCTGCAGCAGCACATTCGTTTGCACACTGGCGAGCCCACCGATCTCACGCCCGAACAAATACAAGCCGCTGAAATACGCGATCCGCCGCCCTCTATGATGCCAGGTGCTTTTATGAACCCATTCGCAGCAGCCGCTTTTCACTTTGGCGCCATGCCAGGCGCAGGAGCGGCAATGGCGCATTTgggtccacataacggtaccaTGGGCTCGGAGTCCTCGCAAGGTGACTTGGATGACAACATCGATTGTGGCGATGACTTTGATGATGATATCTCCTCAGAGCACATGTCCAGTGCACACGACTTGGATGTGGGCGAACGCCCACGATCCAGCGACGACTTCAAAGGTCTACTCTTCGAGCAAAAGTTACGTATAGACCCTACAGGCGTAGTGAACACCACACCGCAACGTCCGCTGTCGACGGCCAGCAACGCGAATTCAGTAAACTCTGCACCGGGCAGTCCCAACTCAGCGCCACGCCAGTGCTCCACGCGCAACAGTTCGCCCGCACGTTCCATATCTGAAGTGTCGCAAGGCGCGCTCGATCTGACGCCGCGCACCATACCGCTACCTGCAACCAACAAAAGTGGATCGCGTTCACCTGCGCGCACGTCTGCAACTCATCTAACAGCGTGCAAATCCCCAACGCCACCGCTGCGCAACACCAGCGCCAACAGCAATACCACAAGAAGTCCCAACCCAACAGTCATACAAAAATCACACACACAACTGAGTCCGCCAACAGCGCTGCCGCCAACATTGGTGCCCACATCAGCCGTTGACTGCTTGCCACCAGTGTTGCATCATCATCTGCAGCAGCAACATCAACAATTAATGCAACAACAAGCTGTAGCGGCGGCTGCGGCCCACGCGCAAGCTCAAGCGCAACATCATCAccaacaaatgcaacaacacgCCGTCGCTTTGCACGCAGAACAGCTGCGCCGTGAGCACCAAATTAAACACGAACAACAACAGGCGGCGCATCAGCAACATATGCGCCAGCAACAACAAGAATCTCATGCGTCCGCACATTCACCACATCAGCTGTCATTGCAAGCGTCACCGCATCTTGCACATcatctgcaacaacaacaacagcaacatcagcatgcagcagcagcagcagcggcagcggcagcacaacaacaatcacCAACAGGCGCGCTTCCAACGGCGGGACCACATCCACCAAATCCGTTGGTAGCAGCACGTCCACCCTTCGGCATGTTCCCCAATTTGCCACTCTTCCCGCCGGCGACAGCACAAACGATGTGCTCGGCAATGAATACGATTGCGCAATCGGTAATGCCGGCGGCACCGTTCAATCCACTTGCACTTTCCGGCGTGCGAGGGAGCACCACCTGCGGCATCTGTTTCAAAACATTCCCCTGCCATTCAGCTCTAGAAATACACTATCGCAGTCACACCAAGGAGCGGCCATTCAAGTGTACGATCTGTGATCGCGGCTTTACGACAAAGGGCAACCTCAAGCAGCATATGTTGACGCATAAGATACGAGATATGGAGCAGGAAACGTTCAGGAATCGTGCAGTAAAGTATATGAGTGGCTGTAAAGATGACTATGAGTAA
Protein Sequence: MKNHISTVLCEMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSTEKDETSDQEENGACSPVASQEVANNIAKATTNTTATTDMVAAPTNCAIGNDLSIAAQAQDRSQSATDVAENHTKTETAASDIAVTEDHNHNNTSNSNSSLNNVAITAGASPTRLEEARGSTPVERLLQMTSIAKAAELEVSGVGSTASAISAANSPTYNTYLTDKTAVTNNNKFGSPTPMDTEEQEQPLYASAGTMRTATVQGDGEEEDAEEQQGVQEAPSAAELDVKQPTSETAATSPSAKPSGSEEAATETDAVMATTSAPPTPTLSALTAAGGLPQAAAAFGAAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNDAAMKQLAFLQQALFNLQQQQLFQIQLIQQLQSQLAMHQPAKGAGEGEGDVEEMEEEVEDGEEDTYEEEERIAEMELRQKAEARMAEAKARQHLINAGVPLREEKANGTRAATASTPASGTTTTETLKRKREDDNDELNVASRRMSLDVSQSAATRLKEQMPTTSDALSKLKEMENMPLPYGTDLASSIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFGDKNGDGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPTHTPAAMPQQMPQQMPPVSLPMSFPPSAAFPGLSGLYRPPMELLKSLGAAAGNVGFPNPFFPHIPSTAELRPEVPSTQTASKEKSSDVPTDLRKSSASNSPVLTVKTEIMEETEEDQADKQPATEPAEKAPASTAVDPPTNASPPLNIKIKEERIDVDLQDEEIERANTPPARLSASPAPVTTSPAQSCASAPFTPPTPTSRPIALPPVVQPAQPPIIMHPHPSPGTHNHIDHLPTPGQLPPSLHHRDDFFADRFPLNFTKNLSPEHHSPIRSPAHLQRSPFFNPIKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAGAAMAHLGPHNGTMGSESSQGDLDDNIDCGDDFDDDISSEHMSSAHDLDVGERPRSSDDFKGLLFEQKLRIDPTGVVNTTPQRPLSTASNANSVNSAPGSPNSAPRQCSTRNSSPARSISEVSQGALDLTPRTIPLPATNKSGSRSPARTSATHLTACKSPTPPLRNTSANSNTTRSPNPTVIQKSHTQLSPPTALPPTLVPTSAVDCLPPVLHHHLQQQHQQLMQQQAVAAAAAHAQAQAQHHHQQMQQHAVALHAEQLRREHQIKHEQQQAAHQQHMRQQQQESHASAHSPHQLSLQASPHLAHHLQQQQQQHQHAAAAAAAAAAQQQSPTGALPTAGPHPPNPLVAARPPFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGCKDDYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00992916;
90% Identity: iTF_00992916;
80% Identity: -