Basic Information

Insect: Sphenella marginata
Gene Symbol: -
Assembly: GCA_951509765.1
Location: OX608079.1:118893208-118897665[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00039 0.06 15.3 1.0 1 23 198 220 198 220 0.95

2 14 0.0018 0.28 13.2 2.3 3 23 228 248 226 248 0.95

3 14 0.00036 0.055 15.4 0.2 1 23 392 414 392 414 0.98

4 14 0.0027 0.41 12.7 0.0 2 23 421 442 420 442 0.97

5 14 9e-05 0.014 17.3 2.3 1 23 474 496 474 496 0.97

6 14 0.012 1.8 10.7 0.3 1 23 512 534 512 534 0.94

7 14 0.0042 0.64 12.1 0.3 1 23 540 563 540 563 0.98

8 14 0.38 58 5.9 0.3 5 19 574 588 571 589 0.91

9 14 0.00022 0.034 16.1 5.6 1 23 598 620 598 620 0.97

10 14 0.037 5.6 9.1 0.3 3 23 627 647 625 647 0.96

11 14 1.3e-05 0.002 20.0 0.3 1 23 655 677 655 677 0.98

12 14 0.0065 1 11.5 0.2 3 23 685 705 683 705 0.97

13 14 0.00075 0.12 14.4 0.5 1 23 711 733 711 734 0.95

14 14 0.0066 1 11.5 0.0 1 20 1305 1324 1305 1327 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00039	0.06	15.3	1.0	1	23	198	220	198	220	0.95
2	14	0.0018	0.28	13.2	2.3	3	23	228	248	226	248	0.95
3	14	0.00036	0.055	15.4	0.2	1	23	392	414	392	414	0.98
4	14	0.0027	0.41	12.7	0.0	2	23	421	442	420	442	0.97
5	14	9e-05	0.014	17.3	2.3	1	23	474	496	474	496	0.97
6	14	0.012	1.8	10.7	0.3	1	23	512	534	512	534	0.94
7	14	0.0042	0.64	12.1	0.3	1	23	540	563	540	563	0.98
8	14	0.38	58	5.9	0.3	5	19	574	588	571	589	0.91
9	14	0.00022	0.034	16.1	5.6	1	23	598	620	598	620	0.97
10	14	0.037	5.6	9.1	0.3	3	23	627	647	625	647	0.96
11	14	1.3e-05	0.002	20.0	0.3	1	23	655	677	655	677	0.98
12	14	0.0065	1	11.5	0.2	3	23	685	705	683	705	0.97
13	14	0.00075	0.12	14.4	0.5	1	23	711	733	711	734	0.95
14	14	0.0066	1	11.5	0.0	1	20	1305	1324	1305	1327	0.93

Sequence Information

Coding Sequence: ATGAATCGACAAACGTTCCAAATACAGTGGACTGGCTTGAAAACTGTCGGTGGGCAGTTGATTGTGAAGTCACAAGTTCCTTCCGAGGAAGATTTGTTAGCCAATGGTGTGGACGCCGCTAGTAGTGCGGCTTATCATTTAGTCGCTGgcgatgatgatgacgatggcAATGTACCAAGCGAAGTTGATATTGATCAAATAGCGGCCGAAAACTTAATATTTATGGCACGAGATGGACAAATGGTAACTGAGCTTATTGGTGCTACCACTGATAGTAATGGTACTGTTGTTGTGGCCGCATCTGATGGCGTAGAGCGTCAGGCGTTGCAACAAGCCGCTGCTGCAGTTATGGCTGGTAATGAGTTGAGACACGAACAAGAAGATGCAGGTGGTGGATTTGTTGAAAACTTTGTAGATAACACACCACAAATGGTAACCGAAGAGGTCATAACGGATGATTGGGTGCAGCATCAGGGTGAAGAACGTGTCGAAATACCAGCAGACCAAATAATATGCTCCGGTTCACAGGTATTGCTCGACATGGAAGTTCCTCTACCTACTGTGCAGGATGAGTATACAGCATTACGACCTTACCCCTGCGATTTTTGTAGCCGCCGCTTTCGCAAGAAGACTAGCTTAATGAATCACATAGTTGCACATCAAAATGATCGGCCCCATTTGTGCAAGTTATGTGGATCGCGTTTCTTTCGTCGTTCTGATTTGATAAATCATTTGAAAGCGCATGCAGATGCACCTGATCCTGAATTAGATTCAGAATTCATGACCTTTGTAGAGCAAGAGCAACATCAGTCGCAGTTACGCCAACCAAATGATCACTATTACGAACAAGATTGGACAACACAAATAAACAATGTGCAACGTAATGAAAAATCTAGTCGTAAACCGTATAATGTAAGCGGGAACAGCTCATCTACCTCAACATCGACAACCGTGGGACGTGGCCGCATTAGCAGATTAAAGCCAAAAGAAGAGAGCTATGTTTTAAACGAACCGCTACCTACTGATACTGTCGAGTATATTACTGCAGAAAATACAGACATTGTTTACGAAGACTGCCAACAACTACAAGCATCCACGGCTGTCGTAAAATTCACACAAAACCAATCACCAGCGCATCAGCAGAGCTTCCCCATAATCGACGATACTAAACCATTTGTTTGTCAacagtgtggtttagcatttgCCCGAGAAAAAGCGCTTTTATCACATACAAAGAATCATCGCGACGATCAGCCGCTCGAATGTGGTGAATGCAACGAGATGTTTTGGGATGCAGCCAGCCTACAGGAGCATCAAAAAACGCATAAATTCGAAGATAGTAATTCAGAGTATGATCCCGACGAAGCGGAAGCTGAAGAAACACAAAGTGAATCTGAGTCTGACCGTTTATACGGGGAATTCTATTGCAGTGAATGTGGTATGTCGTTTCATCGAGAAGATCTTTTACGAAGACATTCTAAGATACATGCAAAAACTAAAACTGAAGATAGTGCAGACAATGATAAGGATCGACATTGTTGTAATACCTGCGGTGAAACTTTTGCTGAAGCTTTAGACTTATTGGCACATGCTGAAATTCATGCGCGTTCTCCACCCTTCAaATGTGTTCTATGTGGTGAAACTTTCTTTGAAGAGGTCACAATCAAACGCCATCTTCAAACGATACACTCCCACGATATGACACCCAATTCGTGTATACTTTGTGGCAAAGAATGCCGGGATCGTAAAGCTTTGATTAAACACGCCTGGGATCATTCCCGCGAAAAATGTCATTCCTGTTCAAAATGCGGTAAAAATTTTCACAATAAAGCGCGTCTCAAGCGACACATGGCTTCGCACCGCGATAAGTCCGTCATTTGTGATGTTTGCAATGAAGAATTTCCAGATGGTCGCAGTCTTTCTAATCATCGGCATTCGCATACCAACGTCTCGGGCAAAATGTTTCCTTGTAATGAGTGTGGAAAAACTTTTGGTTCACGAAGTTCACAACAAATTCATGTACGCATACATACCGGTGAAAGGCCTTATGGTTGTCGATTTTGTTGGAAAGCTTTCGCTGATGGTGGCACGCTGCGTAAACATGAACGTATACACACTGGCGAGAAGCCTTATGCTTGTTCAGTATGTGCACGTGCATTCAATCAACGTGTAGTGTTGCGCGAACATATCCGTTCACACCACTCCGGCTTGGATGCAAAGCGCAATACATTTCACTGCACTGTGTGCTCTATGGATATGTTGTCGTCGAATGAACTCGTGCAGCACTTAATACAACATAGCGATATGAATACGGCTATGCAACGGCAGCCAGTTACTGGCCCACGTAAATACAAAAGGCGACGGAAACTAAAGCCCCATGAAATCGCGCGCATACGCAGAGAGAGTCAGCAAAATGCTAATGGCAGTGATATTGATATGTCGGATTTTGATATAGATAATGTCGATGAAATATTGGGCATAACTGAACCAGAATCTTATGCTAAGAAGAGCTCTAAATCCAAACGTGGTAAAGCACGAAACAGCAGCAATAACAACTTACTGAACGATACTGATCATGCAGTTATTTTACCAGATAATGATTTGCTAATAGAGAGGAAGCCGCGGTTCAAATCAACCGGCAGTAATTCTGATACTTTGTGGCAAACAAAGCTCATCAACTCGAATTCTCTGttatcaaatttagaaaacacCTTACAAAGCATAGATACGCTAGTAGTAGGATCATCTATTGATAACACATCACATGCAGATGTTGAAGAACGCAAGTCAAAATACAAAACATCGGGTGATTTCAATAATGGCGGCTCACAACGTACCCAAGaagtacaaataaacaaaaattattgtgcTAATAAACCCCGCAAACGTACTGAAAGGTCAACAGTAACAAAAGTAACTCGTCCGCGCATGATTCATACAGAAAAATTGCGTAATGAAGGTGGACGTAAACGTTCCAAACATATTGTAACACATAGAGAAGAAACTGGTTTGGATCTATTGCGGCGTTCCACAACAATCGTAGATGATTATGAAATTATTTCGCCTGCGACTGAATTGCCGAAACAGATCAGTTCAAGTCCGCCTCGTAAGAATGTACAAAGTAATATGCATCAGCAACAACACGATCACCAGCATACGCAATACACAAATTCACAACACAATAATTCCTCAAGAAATATCGATTTGTATGATACACAGTTTTTAGGTGGAACTTCGACGTTGCGCAAAGAAGCTTATGAAAAATTCAATCCCAGCATAGTTAATGACTTGGAAGAAATTTTACGTTCACCTATTAAATGTGATCGAACAGAGCGTCATCGCTTCATCAGCGAATCCTCCACACAGTTTCTTGAAGAGGAGCAACATAATATGATAAAAATAGAACCGACATCACCAGATTTACGCGAAATTGTGGTTGGTGTTGGTGGTACTTCAACCAGCGTAGGTGTAAGTGGTGGTAGCGCAAGTGGCAGCAGCAATGACCGCCGTTACACACGTACACCCCGCACACGGAATACAACTGCCAATCGTAAATATCTTGAATTTGACACCGATGTGCAAACAAACGGCCTATCTCGGAATCAAAAGCGTACTACAAATTCTGGTAGTAACGGAAACACCTCCCGAAGTAAGCTTAACAGATACAATAATCGAAGAGAGAAAAAAGATAGTTCAGTAAACAGCCAAAGAACCCCCACATATTCTTCCACTTATAACTTGGACACATACACAAAGTCAGTTGGCAGTGGCTCACTGACCACTACCACTGATTCATCGTTCTCATCACTCTCGCCCACTGATGGTATTAACGTGGCTGGCTCAACAGCCGCATCGGTAGTGGCAACAAGTTCTCCTCCATCCACAACACAACCAGAACGTAGAAGACGTTATTTCGAATGTGAGATGTGTTCTGCTGTTTTTTCAGATCGCGCACAGCTGCTTGATCATGTGCCTATACATATTTAA
Protein Sequence: MNRQTFQIQWTGLKTVGGQLIVKSQVPSEEDLLANGVDAASSAAYHLVAGDDDDDGNVPSEVDIDQIAAENLIFMARDGQMVTELIGATTDSNGTVVVAASDGVERQALQQAAAAVMAGNELRHEQEDAGGGFVENFVDNTPQMVTEEVITDDWVQHQGEERVEIPADQIICSGSQVLLDMEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHIVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHADAPDPELDSEFMTFVEQEQHQSQLRQPNDHYYEQDWTTQINNVQRNEKSSRKPYNVSGNSSSTSTSTTVGRGRISRLKPKEESYVLNEPLPTDTVEYITAENTDIVYEDCQQLQASTAVVKFTQNQSPAHQQSFPIIDDTKPFVCQQCGLAFAREKALLSHTKNHRDDQPLECGECNEMFWDAASLQEHQKTHKFEDSNSEYDPDEAEAEETQSESESDRLYGEFYCSECGMSFHREDLLRRHSKIHAKTKTEDSADNDKDRHCCNTCGETFAEALDLLAHAEIHARSPPFKCVLCGETFFEEVTIKRHLQTIHSHDMTPNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICDVCNEEFPDGRSLSNHRHSHTNVSGKMFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCARAFNQRVVLREHIRSHHSGLDAKRNTFHCTVCSMDMLSSNELVQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARIRRESQQNANGSDIDMSDFDIDNVDEILGITEPESYAKKSSKSKRGKARNSSNNNLLNDTDHAVILPDNDLLIERKPRFKSTGSNSDTLWQTKLINSNSLLSNLENTLQSIDTLVVGSSIDNTSHADVEERKSKYKTSGDFNNGGSQRTQEVQINKNYCANKPRKRTERSTVTKVTRPRMIHTEKLRNEGGRKRSKHIVTHREETGLDLLRRSTTIVDDYEIISPATELPKQISSSPPRKNVQSNMHQQQHDHQHTQYTNSQHNNSSRNIDLYDTQFLGGTSTLRKEAYEKFNPSIVNDLEEILRSPIKCDRTERHRFISESSTQFLEEEQHNMIKIEPTSPDLREIVVGVGGTSTSVGVSGGSASGSSNDRRYTRTPRTRNTTANRKYLEFDTDVQTNGLSRNQKRTTNSGSNGNTSRSKLNRYNNRREKKDSSVNSQRTPTYSSTYNLDTYTKSVGSGSLTTTTDSSFSSLSPTDGINVAGSTAASVVATSSPPSTTQPERRRRYFECEMCSAVFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00992854;
90% Identity: iTF_00992854;
80% Identity: -