Smar023514.3
Basic Information
- Insect
- Sphenella marginata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_951509765.1
- Location
- OX608080.1:9225373-9229322[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 2.5e+03 -0.3 0.4 52 115 77 139 56 143 0.46 2 3 2.6e-94 4.6e-90 302.9 6.7 2 218 473 675 472 675 0.92 3 3 0.25 4.5e+03 -1.1 0.9 67 100 1093 1126 1077 1150 0.49
Sequence Information
- Coding Sequence
- ATGTTTAGACCAATCAAGAACTTTATTAATTATATACAAAAGAATGCCAGTAGTAGTGCGATTTTTGGTAGTTCCACAACAATAGCTGACACTGAAACTGAACCCGATGCCGATGAGGTTGGCATTGAAGCAactaaaataaacaacaacataataaaagCGGAGGTGGGGGCAAGCAAAGAGAGGAACAAATCTGCAGCGGAAAGTTGTATTTTCTCTAGTAGTTTAACTGAACAAAGAGAGAGCAAGAAAATGAAGcgtatgcaaataaataaagtaaatattgtaaATTGTAATAGCGTCGCCACAGTAGGCGTGGCAAAAGACAAACAGACGAATGGTGTCGATATTCATGTTGAGAGCGATGATGATGATATcgaaaatcaaatcaaaagcAGTGTTATGATGCGTCAGCCATTGAAACCTCTCCTGGAAGTAGAAAATCTTACCGATGAGCTGGATGGAGATGGAAATGTACATGTGTCTGTACTAGATCGTAGTGATGTTGACTCACAAGAGGATGATGATGAAGAATATCCACCTATTTCACTTGTGAGCGACGATGGTACTATAGGAGGTGGTGACGATACTGCTGAGGAagaccttatcaccgaaggggATGATACTGAAGAAACATTTCTGGAATTAACCAGTGATCAAGACCACCGTTATGAAGATAGCGAAATTGTAGTTATTGGAGATGATGTAAACTGCTCAATTGCGTCTGATGCACCCTCCGAGGATCCCTTGGCAATTGACGATTTAACGCAGCCATCAATTACATCTCTCAAAGATGCTTCGAACCCATTAGATTCCTCTACAAATGATGAGGCTTCTACAAGCACTGACTTGTGGAGTAGTATCGatcatttaaagaaaaattctgtAACGCCAAATGTAGAAAAAGACTTACCAAGTTCGCCACGGCGGCCTCTAAACACGAGCAAAGAAACAATACGCCCTggtgccaacaacaacagcaccggCGTAACAATGCTTAGCACTCAAACCGATGAACATGCCGAAGAATTACGCAGTGATGGCTCAGATTCGGGACTGGGAAGCGAAACATCAGCACTACAGATCACACTGCCCAGCGTTGCAGACAGCAGCCAATTAGTAACAACCAGCGATAATAGTGCGGCTAATACGCCTAATACACATACACTTAAACTAATGAACACAAGTAATGATTACAGTAGCGGCACCAGTAACAGCGCTTCTACTTTGACATTAACGGACAGCATTGCAGCCACATCAAGGGCAATTGAGCCCGTTGCTGTCACATCCGCCATATCGCCACTAACAACTTCATCTAAACCTTTGCGTTCGAATTTGAAACGACGTCTCGATGATGATGATACGCTTGTCGATGAAACAGAGCTAACAAGCACTGATGGAACTTTGATTAAAAAACTCAAGCGTTCTATAAATTTCGATAATGTAGAAGTTTTTTACTTTCCACGACAGCAAGGATTCGGTTGTGTGCCGTCAGCAGGGGGCTGTACATTAGGCATGGGGTCACGCCATATTGGTTTTAAAACACTTACACTAGCCGAACATGCTGCTGAGTTGCGGCGTGCACATCGTATGCAATTGCAAGAAATTAATCCACGTGGTTCCTCCAGCGATGATAGCGAGGAGTCGGAAGAGGATTATCTAAGTGAAGGTAGTGGTTCTGATTTGGATGCTGAATCGAATGGTTTCTTACAACCCGTATCACCGAAGCAGCGGCGTGCATTGCTTAAAGCAGCTGGTATTCGCAAAATTGATGCTGGTGAAAAGATTGATTGCCGCAACATACGAAACTCGCGCGAGGTATGCGGCTGTTCGTGTGTGGAGTTTTGTGATCCAGAGACATGTGCTTGCAGTCAAGCGGGCATCAAGTGCCAGgtGGATCGCGCAATGTTTCCATGCGGCTGTACACGTGATGCTTGTGGTAATGTAGCTGGACGTGTCGAATTTAATCCAACACGCGTCCGAACACATTTCATACACACAATTATGCGTTTGGAAATGGAAAATAGGCAGCAACAGAATCCACCACTTTGCAGTACGATGAGTAGTTATAGCTTATCGGCAGCATGTGGTACATCGTCTACACTTGTGGGCGGCGGCGGTCCACACGCAAGTGGCATATCATCGTCGTCATCCTATGCCAACTCATTACCCGGCAGCTTCTATTCAATGCAAACACAATCAAATTATAGTTCTGGTTACGCATCTCCTGCTTATACAAGCGAACCGGCCGCTAATTATTATCAACAACAAAGCAGCAGCACCACAACCACGCACTTTAGTGCTGTTGGACCCACTGATATACAAAGTTCAACACAGCAAAACTACCAATTAGACGCATTAGATGCTGGCCTTTATACGGGCACTGCTACTGCCACACCGGTATACGGTGAAATTTTGTCATCATATAGCAGTTCATTGGGGGTATCTGCAAGTACTGGCACTGTAAGCGGGTACCATCAAAATATTAACTATTCATCAGGGCAACAAACGCAGgTCTCTACATACACCGCATATCAGCAAGCAGCAAGCTCTGGTTACTCATCACAACACACCCAGCATAGCGATATAGTTGGAGCTGTATCAACCACGGTGCCACCACCAACAACGTTTAGCTCATGCGCCGTACCATCGTTGCCCCCATATGGTGCAGCTACAACAACCGCAGCCGCAGCTCAATATGAAGACAGTAGCAGCTATGCTCTCGTAGACACCACAGCTCCCAGTTGCATCGCAATGGAAGATAGTGGTGGCAGTGATGGTGTTAGCAATGTGGAAGGCATCGTTAAAGAGAGCTGCCTAGTTATTCAAAATAGCAGCGACAACAGTTCGATTGGTAGCGATACTAACGGGCAAATACTTGCTACCAATAACACAGAAAACAACAATACGCTGGTTAATAATAACAGTATTGTTAGTGGCAGCTGCCGAGGCTTTAGCAGCGGCAGTGACAATCCTAATGACAATGAGAGTGACAGTAGCTTCATACAACTTAACGCACCAGTTTCTAGTGCATCACGTCTCTCACAAATCAATGATCTACTACAGCATAATCGTCATACAACCGCTACACTCGTAGCCGTCTCGAATACAGCATCTTTGTGTGAAAATAGTAATAGCGCCGTTGATAAGCCAATTGGTATTCGTAGCGTAACAACTGATTGTGATTATAATgatagcaacagcaacaacagttTGCTTGATGTAAAAGATGGAAATATACCAGAAAAAGGTAAAGAAATAGTGACTTCTGAAGATAATCAAATGTCATTAAAAAAACGCAATAATACAGCATCTAAGGAGAACACAGAGGAAACAAAGGAGAAATCTCTAACCACTATGGATGCAGAATTCGAGACTAATTGTGCTGCCGCTAACCAAAAGGCAAATACTGATGTAGGCAAAACTGGTACTTTGAGTGCCACGTTTACGTCTACTGGCAATATATTAGCTACTGACGATTCTAAAGCTAATACCATAGCTGTTGACACAAACACAACAACTGCCACTGACACATACATTGCGGCTACAAGCTTGGTGGATGTGGACAGTAAATAA
- Protein Sequence
- MFRPIKNFINYIQKNASSSAIFGSSTTIADTETEPDADEVGIEATKINNNIIKAEVGASKERNKSAAESCIFSSSLTEQRESKKMKRMQINKVNIVNCNSVATVGVAKDKQTNGVDIHVESDDDDIENQIKSSVMMRQPLKPLLEVENLTDELDGDGNVHVSVLDRSDVDSQEDDDEEYPPISLVSDDGTIGGGDDTAEEDLITEGDDTEETFLELTSDQDHRYEDSEIVVIGDDVNCSIASDAPSEDPLAIDDLTQPSITSLKDASNPLDSSTNDEASTSTDLWSSIDHLKKNSVTPNVEKDLPSSPRRPLNTSKETIRPGANNNSTGVTMLSTQTDEHAEELRSDGSDSGLGSETSALQITLPSVADSSQLVTTSDNSAANTPNTHTLKLMNTSNDYSSGTSNSASTLTLTDSIAATSRAIEPVAVTSAISPLTTSSKPLRSNLKRRLDDDDTLVDETELTSTDGTLIKKLKRSINFDNVEVFYFPRQQGFGCVPSAGGCTLGMGSRHIGFKTLTLAEHAAELRRAHRMQLQEINPRGSSSDDSEESEEDYLSEGSGSDLDAESNGFLQPVSPKQRRALLKAAGIRKIDAGEKIDCRNIRNSREVCGCSCVEFCDPETCACSQAGIKCQVDRAMFPCGCTRDACGNVAGRVEFNPTRVRTHFIHTIMRLEMENRQQQNPPLCSTMSSYSLSAACGTSSTLVGGGGPHASGISSSSSYANSLPGSFYSMQTQSNYSSGYASPAYTSEPAANYYQQQSSSTTTTHFSAVGPTDIQSSTQQNYQLDALDAGLYTGTATATPVYGEILSSYSSSLGVSASTGTVSGYHQNINYSSGQQTQVSTYTAYQQAASSGYSSQHTQHSDIVGAVSTTVPPPTTFSSCAVPSLPPYGAATTTAAAAQYEDSSSYALVDTTAPSCIAMEDSGGSDGVSNVEGIVKESCLVIQNSSDNSSIGSDTNGQILATNNTENNNTLVNNNSIVSGSCRGFSSGSDNPNDNESDSSFIQLNAPVSSASRLSQINDLLQHNRHTTATLVAVSNTASLCENSNSAVDKPIGIRSVTTDCDYNDSNSNNSLLDVKDGNIPEKGKEIVTSEDNQMSLKKRNNTASKENTEETKEKSLTTMDAEFETNCAAANQKANTDVGKTGTLSATFTSTGNILATDDSKANTIAVDTNTTTATDTYIAATSLVDVDSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00992589;
- 90% Identity
- -
- 80% Identity
- -