Smar013803.1
Basic Information
- Insect
- Sphenella marginata
- Gene Symbol
- SMARCC2
- Assembly
- GCA_951509765.1
- Location
- OX608079.1:14080258-14085115[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6 5.7e+03 -1.0 0.1 34 43 203 212 202 214 0.85 2 2 8.2e-15 2.9e-11 44.8 0.2 3 44 665 706 663 708 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTGTTAGGACCCAAGAAGGACGGTGGTCCTAATGTAGAATTCTTCCAATCAGCAGAATCATTACAAGGATTCGAAACAATTCGTCAATGGTTacagaaaaattgtaaaaaaTATTTGGCAAATAATACCGAACCAATCACAAAAGAGTCATTATCACAAttattaatacaatttttgcaATACGTCGAGGCCAAGCTAGGCAAAAATGCTCAGGAGCCACCGGCAACTCGTATTCCGATGCGTTTGTTTATGGATTTTAAGCCAGGCGGTGGTCTATGTATCATCTTTAGTACGATGTTTAGATTTCGTGCCGAACAACGTGgaaaaaagtttgatttttcTGTTGGTAAAAATCCACCTCGTAAAGATCCAAATATCCAGTTACTGATTGATATCGAACAAGCTTTGGTTGAGGCGAATCTTTATCGtatacattacatttacatcaGGCCCGAAGTAAGCAAAGATCTAGCACAACGCTTACGGGATATATTAATTACCAGGCGTGTGGAGATCGTGTTTGATGAAGAGGAAGCAACACACATTATATATCCAGTTGTTGATCCTCATCCCGATGAATATGCACGACCGGTTTTCAAGCGTGGAAATCATGTAATGTTGCATTGGTATTATTTTCCTGAATCCTATGACACTTGGGCAGCAAACTCTTTTGAATTGCCCGAATATGTACCCGAAAACCCAGAACCTTCAGGAGAACGCTGGCTCGTTTCAGCATCTTGGGTTTTAGATTTGGAACAGTACAATGAGTGGATGGTCGAAGAGGATTACGAAGTAGATGAGATGGGAAAAAAGAAAACACATAAACATCGTATGTCTGTAGATGATATGATGTCATTTGGATCAGATGAAAAGAAACGTTCTTCTGGTGTAAGTGGTACTACTGCAACTAAACAAAAGCGACGCCGTTCACCATCACCAAACACTTCAAAACCTGGTAAACGTAAGCGTTCGCCGGCTGtattgcataaaaaattgcgtAACGACGATGACGATGAAGACTTGACACGCGATATGGATGATCCACCGGCTGAACCGAATGTACAAGAAGTTGTAAAATCAGCGCCACTACAATCTACAGCAAGTCCAGCACCTGGAGGAAAATCGCGTGCTGATAATGATATGATGCCAATTAAagGTGGCACAATGACTGATTTAGATGATGAAATGACGGGTGGTAGCGCAGCTCCAGCTCTTTCCACTGGAGATGGTGAAAATTCACAAACGGGTAAAACAAGTGACAACAGTAATACTCAAGAGTTCTCTTCTTCGGCCAAAGAGGATATGGAAGACAATGTTACTGAGCAAACCCATCATATTATTGTACCCTCCTATTCGGCATGGTTCGACTACAACTCCATACACGTTATTGAAAAACGTGCAATGTCTGAATTTTTTAATGGCAAAAATAAGTCGAAAACGCCTGAAATATTTATGGCATATCGGAATTTTATGATTGACACTTACAGATTGAATCCAACTGAATACTTAACCAGCACCGCTTGTCGCAGAAATCTAGCTGGCGATGTATGTGCTATAATGCGCGTACACGCATTCTTAGAACAATGGGGTCTTATAAATTACCAAATAGATGCAGAGCTACGTCCAACGCCAATGGGTCCACCGCCTACTTCTCATTTCCATATTTTATCAGACACACCATCTGGCCTGCAATCGTTGAATCCCCAGAAGACTCCACAGCCGTCTGCCGCAAAAGCTTTGCTTGATTTGGACAAACCAAAGCTTATTAAAGATGGTAAAGAAGGTTCTGTTGAAGGTGACAAGCCAGCAGCACCCATAGCTGGAGCCGCAGCACTTTTACCAGGAGGCATAAGTATTAAAAGCGAGACATTAGAAAATGGTGCAAGCACTGGTACCGCCGCTGGACAACAATTTGGGTTAAAACTAGATCAATATGCAAAGAAACCTGCCGCTATGAAAAATCGTACAGCTGCAAATATGGCACGTGAATGGACTGATCAGGAAACATTGTTATTGCTCGAAGGTCTTGAAATGCACAAAGATGATTGGAACAAAGTTTGCGAACATGTTGGTACACGTACACAAGATGAGTGTATACTCCATTTTCTACGTTTACCAATTGAAGATCCTTACCTCGAAGATGATGGCGGCTTTTTAGGGCCATTAGGTTGCCAGCCGATACCATTTAGTAAGTCAGGAAATCCAATTATGTCAACTGTAGCATTTTTAGCATCTGTGGTTGATCCACGTGTAGCAGCCGCTGCTGCCAAAGCTGCTATGGAAGAATTTGCCGCTATTAAGgatGAGGTGCCTGCTACAATTATGGATAATCACatgaaaaatgtggaaaaaGCATCAGCGGGTGGTAAATTTAATCCAAGTTTTGGTTTATCCAACAGTGGTATAGCCGGCACAGGTGCTGATAAGGAGGAGGAAAATGATCATGGAGCAGGTTTAGGAGCAGGCGCAATAGCAATGTCAGTTAATACAGGTGCGATAGGTGAAGATAGGAATGAAGTTATTAACAAAGATGAAAATAAATCCAAAACAGACGATGATAATAAGAGTGAGAAGAAAAATATAGAAACAGATGTTAAAAAGAAACGAGAAAATGATTCCAAAAATGGTACCGAAATTAAAAGTGAAGATACCAATGACACCGATTCAAAAGAAGCTGAGGCAAACAAACAACAAGTATTTAATGAAGCTAATGTTCAGACAGCTGCTGCTGCAGCTTTGGCTTCAGCAGCTGTAAAAGCTAAACATTTAGCTGCTCTAGAAGAACGGAAAATTAAATCTCTAGTGGCATTGCTAGTTGAGACGCAAATGAAGAAATTGGAAATAAAACTCCGTCATTTTGAAGAACTTGAAACCACAATGGAGCGGGAGCGTGAAGGTTTAGAATATCAACGTCAACAACTCATAACTGAACGCCAGCAATTCCATTTGGAGCAGTTAAAAGCAGCAGAATTTCGTGCACGTCAACAAGCTCATCATCGCCTACAACAAGAGCAACAATGGCAAGGAGGGACTGCTAATGCAAATGCACCAAGCGGTGGCGCTCCTAGCGGAAATAACTCAAATGCTACACTTAGTAGCAATGCGTCATCTTTGCCATGTCAAACGCCTGGTGCTGTAAGCGGAGCACCTTCATCAGTTACCGGTGTTGGACCACAAGGTGCCGTTGCTACTAATCAGGGCACAGCAGCTCAAACTCCATCAAGTGTCAGCAATACGCAACAGGCTACATCAGCACCACTTGGTTTGCCGTCTGTGGCATCACCAgctgcacaacaacaaacaccaacGCCAATGGATACCACACCAAGCGCACCTGTCTCTGTACCATCAGATGGTCCTACAATAACTAGCCAGACAATTTTGCCACCATTAGCGGTAGGAGTACCAGGAGGTATACCATTGCCACCAAGTGCAAATATGCAATCATCAAATATACCGCCAAACATTCCTCCTACTGGTGGTCCGCCAGCTGCGCCGCCATCATAA
- Protein Sequence
- MSLLGPKKDGGPNVEFFQSAESLQGFETIRQWLQKNCKKYLANNTEPITKESLSQLLIQFLQYVEAKLGKNAQEPPATRIPMRLFMDFKPGGGLCIIFSTMFRFRAEQRGKKFDFSVGKNPPRKDPNIQLLIDIEQALVEANLYRIHYIYIRPEVSKDLAQRLRDILITRRVEIVFDEEEATHIIYPVVDPHPDEYARPVFKRGNHVMLHWYYFPESYDTWAANSFELPEYVPENPEPSGERWLVSASWVLDLEQYNEWMVEEDYEVDEMGKKKTHKHRMSVDDMMSFGSDEKKRSSGVSGTTATKQKRRRSPSPNTSKPGKRKRSPAVLHKKLRNDDDDEDLTRDMDDPPAEPNVQEVVKSAPLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAPALSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMSEFFNGKNKSKTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTPQPSAAKALLDLDKPKLIKDGKEGSVEGDKPAAPIAGAAALLPGGISIKSETLENGASTGTAAGQQFGLKLDQYAKKPAAMKNRTAANMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPSFGLSNSGIAGTGADKEEENDHGAGLGAGAIAMSVNTGAIGEDRNEVINKDENKSKTDDDNKSEKKNIETDVKKKRENDSKNGTEIKSEDTNDTDSKEAEANKQQVFNEANVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGTANANAPSGGAPSGNNSNATLSSNASSLPCQTPGAVSGAPSSVTGVGPQGAVATNQGTAAQTPSSVSNTQQATSAPLGLPSVASPAAQQQTPTPMDTTPSAPVSVPSDGPTITSQTILPPLAVGVPGGIPLPPSANMQSSNIPPNIPPTGGPPAAPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189365;
- 90% Identity
- iTF_00992528;
- 80% Identity
- -