Smar047093.1
Basic Information
- Insect
- Sphenella marginata
- Gene Symbol
- Xbp1
- Assembly
- GCA_951509765.1
- Location
- OX608083.1:49273310-49274902[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-12 4.9e-09 37.6 19.6 2 63 63 138 63 140 0.80 2 2 2.1 5.4e+03 -1.0 0.4 24 56 145 163 139 169 0.53
Sequence Information
- Coding Sequence
- ATGGCAGCAACCGGACCAACAGTTTTTATAACTGTTCCAAAATACGTGGCTATAAGTCCATCTATGGGCTTACCAAAAATAAGGCCAGCGCCGACTACAACTGTGGTCACAGAAGATAACATGCTGATAGATGATAACGCTTCTGCACCGAGAGGCAAGAAACGTCGTCTAGACCATTTGACATGGGAGGAAAAAATACAGAGGAAaaaattaaagaaCCGTGTCGCAGCGCAGACATCACGTGATCGGAAAAAGGCACGAATGGAGGAGATGGATAATGAAATCTATGAATTAACACAGAAAACcgaaatattacaaaataaatgtgaaagtttaCAGTCTATTAATGAATCACTGCTCGAAAAGAATCATAAACTAGATTTAGAAGTCGAAGTGCTGCGACAACAACTAAAAGAAGTGCAAgagcaacaaaagcaacagcaaAAACAATTGGCCAGTAATGCCGCCAATTTGAACTCCACTAATAAACACACAGTTGGTACTTGTGCCGGCTCAGGGATCAACACAAATGGACTCTCAGTCGACAGAAGACCAATTGAAAAAGTGCAACACAGTGGCGTCTCTGTGGAGGATTATAGCAGTTTGCCTACTCTTCAAGATATGCTCCTCATCGACGAAGAATTCGATGCCAGCAAACTTGAAGAACTTGCAGAAAGCCTCCTGGCCGATATCGCAGCAGACATGGAAGCTAGTAATGGCGCGTGCAATAAAAATGATGCCAAAATTGCAAGCTGCGCAGAGCGATTGTCTGGATCAGTGGTGGGGACCAAAGCAGAATGCTTGGAACCCAGCGAATATACAGAGACCTCATCAAGTAACTGCATAAATGATTATAACACGCACACGACATCCGCCATTAAAATTGATGATGATGCAATACGAttacaaaatgaattaaatgcaGTGATAGATATAAATGCTAATAACGATGCGGCCAACTATACACCTATAACGGCTGAGTCTTTAACGCCAGCACAAGCGCCAACGATTACATTGACCTCATATGAAGCAGATGATGGATTGGGAATCAACGCCACATCAGCAGAACCAGATACGGTGTACGGTACATACGATGCAAAAACTAATTCCATTACAATAGTAATGGATGATGATACAGTAGCAGTGAATGAAGCCGTCGAAGAAATTTATTGTGATGGTGTGACACCAGCGGCATGTGATGAAATTCAAGTTCCCTCCCCTGCCGCGTCACCATCACAAGTTTTTCTGAACGTCGTCGATGATTCTGATGATGATGATTTCGATCCGATGAAACATTTTCTACGACCAAAACGCCCGTTAGCAAAATCTCCTGCACCTTCGTTACATTCAGCCATGTCAGATCATGGTTATGAATCAATTATTGGTTCGCCTACATCCACAGCGACAGAACAATTCGATACGAGTGTTGAAGAATTTGACTGGCAGGAGAGTTTTGATGATTTATTTCCTAGTTTGTGCTGA
- Protein Sequence
- MAATGPTVFITVPKYVAISPSMGLPKIRPAPTTTVVTEDNMLIDDNASAPRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKARMEEMDNEIYELTQKTEILQNKCESLQSINESLLEKNHKLDLEVEVLRQQLKEVQEQQKQQQKQLASNAANLNSTNKHTVGTCAGSGINTNGLSVDRRPIEKVQHSGVSVEDYSSLPTLQDMLLIDEEFDASKLEELAESLLADIAADMEASNGACNKNDAKIASCAERLSGSVVGTKAECLEPSEYTETSSSNCINDYNTHTTSAIKIDDDAIRLQNELNAVIDINANNDAANYTPITAESLTPAQAPTITLTSYEADDGLGINATSAEPDTVYGTYDAKTNSITIVMDDDTVAVNEAVEEIYCDGVTPAACDEIQVPSPAASPSQVFLNVVDDSDDDDFDPMKHFLRPKRPLAKSPAPSLHSAMSDHGYESIIGSPTSTATEQFDTSVEEFDWQESFDDLFPSLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00992307;
- 90% Identity
- -
- 80% Identity
- -