Basic Information

Insect: Sphaerophoria taeniata
Gene Symbol: -
Assembly: GCA_943591125.1
Location: CALSBT010000045.1:211247-213861[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3 2.7e+02 3.5 0.2 1 17 6 22 6 23 0.88

2 8 2.6e-05 0.0031 19.1 0.6 1 23 244 266 244 266 0.98

3 8 0.0021 0.24 13.1 0.4 1 23 344 366 344 366 0.97

4 8 6.4e-06 0.00074 21.0 1.7 1 23 372 394 372 394 0.96

5 8 7.9e-06 0.00091 20.7 2.3 1 23 400 422 400 422 0.99

6 8 2.6e-05 0.003 19.1 1.7 3 23 430 451 428 451 0.96

7 8 2.8e-05 0.0032 19.0 1.9 3 23 458 478 458 478 0.99

8 8 2.2e-05 0.0025 19.3 2.2 1 23 484 506 484 507 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3	2.7e+02	3.5	0.2	1	17	6	22	6	23	0.88
2	8	2.6e-05	0.0031	19.1	0.6	1	23	244	266	244	266	0.98
3	8	0.0021	0.24	13.1	0.4	1	23	344	366	344	366	0.97
4	8	6.4e-06	0.00074	21.0	1.7	1	23	372	394	372	394	0.96
5	8	7.9e-06	0.00091	20.7	2.3	1	23	400	422	400	422	0.99
6	8	2.6e-05	0.003	19.1	1.7	3	23	430	451	428	451	0.96
7	8	2.8e-05	0.0032	19.0	1.9	3	23	458	478	458	478	0.99
8	8	2.2e-05	0.0025	19.3	2.2	1	23	484	506	484	507	0.95

Sequence Information

Coding Sequence: ATGGGCAGAGAATCTCATACCTGCAGAGTTTGCACAAAAAGATCCAAGGACTATGTTGATTTAGAAGCTATCTACGGCCGCAAGCCGCCGATAAGTTATCTCGAGGTTTACAACATATGCACCCAATTGAACGCCGCTTTCGATGATGAATTACCCAAGTGGTTGTGTTCGTCCTGCAGCAAAGAACTGAAATCATCGTTCAAATTTGTGGAAAAAGCCCGAGAAACAGACAAACGATTGAGAGATACAATCGGCCGTAATCGAAACACTAGAAGTCGAAGAAATGAAAAACAAGAAGAAAGAGCACCTTTGGAGAACGCAGAGCCTGCTTTTGAAGAGATTAAGCCTGAATTCATCAATTGTACAAAAGATCCTCTTGAGGATTCTGATAAAGAAGTAAATGAAAAGTCTGAAGATGAAATGGATTGGGTACCTGATGCCGTTGATGATATGCAAACAGATGGCTTTGCTGACGAAAAGACTGCAACAATCGATGACGACGATGATAAGCCTCTTACACAGCTGATAGAAAAACGGAAGCTCACGACTGGGCCGAGTCTTGAAGAGAAACCCGAATACGATTCGTCGGATATCTTCAATGACCTCCACCTTCCAGCCAACAGTGATGATTCCTCCGAAAATGAAGGTGCCTTGTTTGAGGATAAAATGATGGAAGTTATGCCAGACCCTCCATCAACACAAGAAGCACAAATATTCCCTCAAGGTCGCTACATGTGTAAAATGTGCAAACAAACTTACTTCACCGCTGACGGACTGAAAGCCCATATGAACGTCCACTTGCCCAAGAAAAAGAAGGTCAAGCGCATTCGAGGACCCAACAAGAAGAACTCAAAATCCAAAAAGAAGAAGAAGAATGCAGCAAGTGACGACGAGGATGAAGATGACGAAGAAGGATCGCCAGACAAAGATGGTGAGCCGAAAGAACCCAACTGCGACGAGTCCACAGAAACAACTCAAGTTCAAGCTAAAAAGAACCGCAAACTAAAACCTCCCAAGCCGAAAAAGATGTTCCCGTGTGGAGTGTGCGGCAAACACATGATCTCGGCATCCAAACTGCGCTACCACATGGTGATGCACACCGGCGAGAAAGACTTTTTGTGTACAATGTGTCCCAAAGCCTATTCAACAATTTATGCCTTAAAACATCACATGCGCACCCACACCGGCGAACGGCCATACGAGTGCAAGTTCTGCGGAGACAAATTCACTCGCCCGACGACGCTCAAGTCCCATATGCGCCGTCACACCGGCGAACGGCCGTACGGCTGTGATATTTGCGGCAAACGTTTCATTCAGCACTCCTCGATGACCACTCACATGAAACTCAATCACATGGCCAAGACCATTGGCTGTCCGCATTGTGATAAGAAATACGCCCGTCAAACTGATTTGAATACACATTTGCTCAGTCATACGGGCGATAAGCCTTTTTCGTGTTCACTATGTCCGAGTCGGTTCATCCGGCAGGCCAATTTGAACAAGCACATGAATCAGCATCATCTGGCGAAGAATAAATCAACGAAACCGCAGCATTCGAAGAAGAAGTTGGAATTGGAGACTGATGAAACGGGAGCACCGGAAAAAGAAGCTTCTACTGGTCTCTTGCCAACATCCACGACCATTCAGTTGATAAGTTCTCCGCAAATCCCAGTGGAGGGTTCCCCAATAATGAACAATCAGTTTGCTGTCACGCAGCAGAAAATTGTCGTCGCAACAACAGTCGCTAATGATACTGTCATGCAGCAAAAAATCAACTTCGCCATAGCAACGAACCAATTCAATTCGCTGCAAGCCGCTCCGGAACTGCCCTCACTGCCCAAGATGATAAGTGTAAGATCCCTGGCTAGACCAATGCCAAAGGGAACGGTCACTGTTGCAATGAGACGAGTTCAGACTCCACCGGGGAGTGGGAGCGATGAAAGCAATACAAGCAATCGTTTTCTACCGAATCCGCCTTTATTGTCACCGAATGCCGCACCATCGCAGTTGAGACATCCGCAAATGCAACAGACTGCCATGCTGCCACCTCTCACCCAACAGCAGCGGTTGCCGAACAATGAGAACAGCATGCCCATAAGCATGAATATTGCTGGAATTCCCGGCGGTATACCGACGCACACTATGCTGGGTGGCACCGCCGCCGGCGGCGTTACTGTCCACAACGGCCAACATGGGCAAATGGGATCCGTTGAGCACTTAAAAGGCATTCATCCTCCGGTCGATAATCTAACTAACTTGCTGGGTCAAGTAATCGATCCGGAACGAATCGGACGTTCCGTCGAGGAAGTTATTCCCTGGTCGTGGTCGAATAATTCATAA
Protein Sequence: MGRESHTCRVCTKRSKDYVDLEAIYGRKPPISYLEVYNICTQLNAAFDDELPKWLCSSCSKELKSSFKFVEKARETDKRLRDTIGRNRNTRSRRNEKQEERAPLENAEPAFEEIKPEFINCTKDPLEDSDKEVNEKSEDEMDWVPDAVDDMQTDGFADEKTATIDDDDDKPLTQLIEKRKLTTGPSLEEKPEYDSSDIFNDLHLPANSDDSSENEGALFEDKMMEVMPDPPSTQEAQIFPQGRYMCKMCKQTYFTADGLKAHMNVHLPKKKKVKRIRGPNKKNSKSKKKKKNAASDDEDEDDEEGSPDKDGEPKEPNCDESTETTQVQAKKNRKLKPPKPKKMFPCGVCGKHMISASKLRYHMVMHTGEKDFLCTMCPKAYSTIYALKHHMRTHTGERPYECKFCGDKFTRPTTLKSHMRRHTGERPYGCDICGKRFIQHSSMTTHMKLNHMAKTIGCPHCDKKYARQTDLNTHLLSHTGDKPFSCSLCPSRFIRQANLNKHMNQHHLAKNKSTKPQHSKKKLELETDETGAPEKEASTGLLPTSTTIQLISSPQIPVEGSPIMNNQFAVTQQKIVVATTVANDTVMQQKINFAIATNQFNSLQAAPELPSLPKMISVRSLARPMPKGTVTVAMRRVQTPPGSGSDESNTSNRFLPNPPLLSPNAAPSQLRHPQMQQTAMLPPLTQQQRLPNNENSMPISMNIAGIPGGIPTHTMLGGTAAGGVTVHNGQHGQMGSVEHLKGIHPPVDNLTNLLGQVIDPERIGRSVEEVIPWSWSNNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -