Basic Information

Insect: Sphaerophoria taeniata
Gene Symbol: pita
Assembly: GCA_943591125.1
Location: CALSBT010000304.1:864486-873680[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.021 2.4 10.0 0.4 1 23 164 186 164 186 0.94

2 10 7.5e-05 0.0087 17.7 3.8 1 23 192 214 192 214 0.97

3 10 7.5e-06 0.00087 20.8 2.9 1 23 220 242 220 242 0.99

4 10 0.0008 0.092 14.4 0.3 1 23 248 270 248 270 0.97

5 10 0.00041 0.047 15.3 0.1 1 23 276 298 276 298 0.94

6 10 1.1e-06 0.00013 23.4 1.3 1 23 304 326 304 326 0.96

7 10 0.0021 0.24 13.1 5.5 1 23 332 354 332 354 0.98

8 10 4.1e-05 0.0047 18.5 0.6 1 23 361 383 361 383 0.96

9 10 1.4 1.6e+02 4.3 0.0 3 23 390 410 389 410 0.96

10 10 0.073 8.5 8.2 0.1 1 23 416 439 416 439 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.021	2.4	10.0	0.4	1	23	164	186	164	186	0.94
2	10	7.5e-05	0.0087	17.7	3.8	1	23	192	214	192	214	0.97
3	10	7.5e-06	0.00087	20.8	2.9	1	23	220	242	220	242	0.99
4	10	0.0008	0.092	14.4	0.3	1	23	248	270	248	270	0.97
5	10	0.00041	0.047	15.3	0.1	1	23	276	298	276	298	0.94
6	10	1.1e-06	0.00013	23.4	1.3	1	23	304	326	304	326	0.96
7	10	0.0021	0.24	13.1	5.5	1	23	332	354	332	354	0.98
8	10	4.1e-05	0.0047	18.5	0.6	1	23	361	383	361	383	0.96
9	10	1.4	1.6e+02	4.3	0.0	3	23	390	410	389	410	0.96
10	10	0.073	8.5	8.2	0.1	1	23	416	439	416	439	0.95

Sequence Information

Coding Sequence: ATGGCTCCTTGTATGCTGCCAGACCTTAGCACTCTCAAATCGGTGATTGTGGACGATCCGAACTATTGGCCAGTGTACTTTGAAAAAGGACGCAACTGGGATCAGTTGACTAATGTCGAAGTGCAAGAAGCTCCAAAAATCGAAAAGAAACTACCAGTTGAGAAACCATTGGTTATGCGAACAATCAAACCAAAAACCCAACACATTGAACTGGCGATTGAAGAACCAGACGACGAAGAAGAAGAAATTCAAGTCCCAAAGGCACATCAATCATCTGTTCGCAAAACAACAACAAGTGGTGTTAAAGTTTTAAACAAATCAGCAATTCGCATACTCAATAAAGAGGCCCAAATGGTTATCGAACCGATTATTGCCAAGCCGGTATTGAAATGCGATGACGATGGGAATATGGCCGCTGTCACTCAGATTCTCGAACAAGATTTGCCCGATGCTGAGGAGCAAAGCACCGAGGTGCTCGACACAAATGTCTTTCCCTGTCTGCATTGCGAACGTTCGTTCCCACTGCAACAGCTTCTCGATATACATTTGGTGAATCACAATCGCGAGCGGGGCTTCAATTGCAGCTATTGCGAGAAGAGATTCTTCAGTAAGTATGATCTGCAAAAGCACAATCTAACACACACTGGCGAGAAGCCGTATAAGTGTGTTGTTTGCGACAAAGGATTCACCCGTTCAACTTTGTTGCATCGCCACGAGAAAACCCATATTGACATTCCCAAATTTATTTGCGTTTTCTGTGAGAAGGCATTTATATCGCAAGAGGAAATGGAAAAGCACACCGAACGTCATCGCAAGAAGCGACCCTACGCATGTAGGATTTGCAACAAAGCGTTCGCTTTCAAACAGGGTTTGGAGCGGCACGAAGTCATCCATTGCCGCCAGCAACCGTTTCAATGTCAGTACTGTGACCAGAGCTTTTCGACTCCCAGCAAGCTGTCGCGACATTTAACAGCTCATGCTGGCAACCGGCCATATCCATGCAAACTGTGCTCCAAGTCCTATCTGCTGAGTCATCATTTGACGCGCCACATGCGTTCGCACAAGAACACTCCTGGTTTGTACAAGTGCAACGATTGCCTCAAGTCATTCAACAATCGGGACGATCTGATTTACCATTCGGCAGTGCATGCTACGCAGACAAAAATCTGTCCATTGTGCAAGGATGCATTCGATGACATTGAAACGGTGACCGATCACGTGCGCCAGCATGCCGAAGGTGAGGCCTATGCCTGCGAGTTCTGCGATTTGATTTACATGACCAGCGATCGATTGGATACTCACATCAATGAGGCGCACGTAGATGAGATGGTCGCTTATGACGAGGATGATAAGAAAAACCAAATGTCTGTTAAAACATCCCAGTCGACGTCGGCCAAGGAAAAGGAAATGGATGAGGAGATCGAGGAGTTCCTCTATGAGGAATTTCCCGATGAGCCACTCAAAAAGGAACAAGATGAGGATGTAATGTTGAAACACGAATCGGACAACCACAACGAAGAGGAAGCCAATACTTCGTCAAAATCAATTGAATCAATAATTGACGAAGAGACATTGGAACTGATGAATATAATCGAAGAAATGAATGAATCCCCCGACGAGCAGCTGCCGCCGGCTAAGGTCAAGAAAACAGGTGAAAAGTCACAACAACCGACAAAAATTGTTTCAATCCAGCAAGTTCCAGCTCGCCGAAAGCAACCAACAAAACCTGCACAGACAGTTGAAGCAGCCAGTTCGTCATCGACTCAAATAAAATCATCGCCAAGAGCAGCAGCTCCTGCATCAGCAGGTTCATCGCAGCCGTCGAACAAAGCAACTCCTAAGCAATCGCCGAATTTGACACGAACGTTACGACAACGTACCGACACCACTCCCGAAACCAAAGTCACACCAAAAGCTAGTCCCGTCTCAGTGGAGCCGATTAAGAAATCTCCACCACAAAAGCCAATTCCTGAAGTAACTAAGGCGACTGCGAAGAAACCCGAAGAACCACTTGAAATGTTTATTGGTGACAAGAAAGTCAAAACTAATGTCGAAGTGCAAGAAGCTCCAAAAATCGAAAAGAAACTACCAGTTGAGAAACCATTGGTTATGCGAACAATCAAACCAAAAACCCAACACATTGAACTGGCGATTGAAGAACCAGACGACGAAGAAGAATAA
Protein Sequence: MAPCMLPDLSTLKSVIVDDPNYWPVYFEKGRNWDQLTNVEVQEAPKIEKKLPVEKPLVMRTIKPKTQHIELAIEEPDDEEEEIQVPKAHQSSVRKTTTSGVKVLNKSAIRILNKEAQMVIEPIIAKPVLKCDDDGNMAAVTQILEQDLPDAEEQSTEVLDTNVFPCLHCERSFPLQQLLDIHLVNHNRERGFNCSYCEKRFFSKYDLQKHNLTHTGEKPYKCVVCDKGFTRSTLLHRHEKTHIDIPKFICVFCEKAFISQEEMEKHTERHRKKRPYACRICNKAFAFKQGLERHEVIHCRQQPFQCQYCDQSFSTPSKLSRHLTAHAGNRPYPCKLCSKSYLLSHHLTRHMRSHKNTPGLYKCNDCLKSFNNRDDLIYHSAVHATQTKICPLCKDAFDDIETVTDHVRQHAEGEAYACEFCDLIYMTSDRLDTHINEAHVDEMVAYDEDDKKNQMSVKTSQSTSAKEKEMDEEIEEFLYEEFPDEPLKKEQDEDVMLKHESDNHNEEEANTSSKSIESIIDEETLELMNIIEEMNESPDEQLPPAKVKKTGEKSQQPTKIVSIQQVPARRKQPTKPAQTVEAASSSSTQIKSSPRAAAPASAGSSQPSNKATPKQSPNLTRTLRQRTDTTPETKVTPKASPVSVEPIKKSPPQKPIPEVTKATAKKPEEPLEMFIGDKKVKTNVEVQEAPKIEKKLPVEKPLVMRTIKPKTQHIELAIEEPDDEEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357300;
90% Identity: iTF_01357293;
80% Identity: -