Basic Information

Insect: Sphaerophoria taeniata
Gene Symbol: su(Hw)
Assembly: GCA_943591125.1
Location: CALSBT010000922.1:585231-590883[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00079 0.091 14.4 1.4 1 20 135 154 135 156 0.94

2 11 0.00028 0.032 15.9 0.6 3 22 207 226 205 228 0.88

3 11 0.12 14 7.6 0.1 1 23 234 256 234 256 0.96

4 11 2.6e-05 0.003 19.1 1.1 1 21 263 283 263 284 0.95

5 11 5.2e-06 0.0006 21.3 0.5 3 23 297 317 295 317 0.97

6 11 0.00027 0.031 15.9 6.5 1 23 329 351 329 351 0.99

7 11 5.4e-05 0.0062 18.1 0.7 1 23 357 379 357 379 0.96

8 11 4.1e-05 0.0047 18.5 0.7 1 23 385 407 385 407 0.99

9 11 7.3e-07 8.5e-05 24.0 2.6 1 23 413 435 413 435 0.98

10 11 0.00051 0.059 15.0 2.4 1 23 439 461 439 461 0.90

11 11 0.00068 0.079 14.6 0.1 1 20 494 513 494 518 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00079	0.091	14.4	1.4	1	20	135	154	135	156	0.94
2	11	0.00028	0.032	15.9	0.6	3	22	207	226	205	228	0.88
3	11	0.12	14	7.6	0.1	1	23	234	256	234	256	0.96
4	11	2.6e-05	0.003	19.1	1.1	1	21	263	283	263	284	0.95
5	11	5.2e-06	0.0006	21.3	0.5	3	23	297	317	295	317	0.97
6	11	0.00027	0.031	15.9	6.5	1	23	329	351	329	351	0.99
7	11	5.4e-05	0.0062	18.1	0.7	1	23	357	379	357	379	0.96
8	11	4.1e-05	0.0047	18.5	0.7	1	23	385	407	385	407	0.99
9	11	7.3e-07	8.5e-05	24.0	2.6	1	23	413	435	413	435	0.98
10	11	0.00051	0.059	15.0	2.4	1	23	439	461	439	461	0.90
11	11	0.00068	0.079	14.6	0.1	1	20	494	513	494	518	0.89

Sequence Information

Coding Sequence: ATGGTTCCTTCATTTGTATCTTCTCAGTCTACTAGAACAACAAGAAGTAGAACGCTCAACCCACCAAACACATCCAAATCAACTGAGAAAAAACTACTCCTTAACACGAAAACACCCATCAAAACTGCTGCCGACGATGACGTTGAATTCGTTACCTCAAGCGAAGTAACTGATAGACCAACCGAGCACTATGTCCTTACCGAATTCAAAAACGACGAGGAAGAGGAGGACGAAATTAACTTCGTACTAACTGACAATTTGGACGTTAATGCTGAAGGTCCCCTCGCCGAATGTACCGAAGAAATTCTAATTGACGAAGAAGTTGGCGACGGCGACAATACCAACACTAATGGAGATGAAGAAATCGACCAATTGGTAGTTAAGACTCAAGAAATCGTCGAACACATTTGTGGAAAGTGTTTCAAGACGTTTCGTACTGTTAAGGCTCTTAAGCGGCACATTTCCTTCTGCATATTCTCCGCCGATCTGATGACACGGCGGCAGGAAATGCTGAAAAACATCGACAAAATCGAGAAAGAAGCCTTGCATATGCACAAAAAGGATATTTGCTTTTGCTGCGGCGACAGCTATGACACCTGTCATGGTGGCCACATTAATTGCAGCGAATGTACGAAAACCTTCAAAACTCAGCTGAGCCTTGAACGTCATGCATTCCTCATTCATTCAGAAAACGACGATTTCCCTTGTACTGTTTGTAATGGGAAAATTCGAACAGCAGCTTTGTTGCAACTTCATTTAGACCAGCATGCGACACGCGGCAAGCCGTTTGCTTGCAAGGTGTGCGGCATGGATTTTACGCGTTTGTATCACTTAAATCGTCATTTGAAATATTCGACGTGTAGTGGAAAGAAGGTCGAAGCAATGGCGTGCAAGGTTTGTGGCAAGGAGTTTGTTCGGGTGGATAATTTCCGGACACATTTGAAGACCCACTTGGGTGACAGTTCAACGCCAAAGAAATCTGACTATAGATGTCCTTGCTGCAAGAAGTGTTTCTACAGTTTGTCGACCTTAAACATTCATATCCGAACTCACACTGGAGAGCGACCTTTCGATTGTGATCTTTGTGACAAGAATTTTCCATCGTTGGTTGCTTTGAAGAAACATAGAAGATTTCACACGGGCGAGAAACCGTACACCTGTTCAGTGTGCAACATGAACTTTGCAGTCAAAGAAGTTCTCAACCGCCATATGAAACGTCACACTGGAGAAAAACCACATTCGTGTGATCAGTGCGGCAAGCGTTTCATACAAGCTACTCAATTAAAGAATCATCTTCGCACACACTTGAGGCCATTTGAATGTCCCGAGTGTCCAGAGAAGTTCAAAACCAAACGGCAAATGGAAAAACATTGCATATCACATACCTCCAAGAAGCGGAATCCTAATGCTAAGAAACAGCAAATTGAACCCAAATCAGGTGAATCGAACGAAGGCGTCAAACGTAGAAAACACAAAGAGTACAACTGTCCAGATTGTGGCATTGTCTTCAAGACAGTGCCGTCATTTTTGCGTCACGAAGCTTCTGAAGAGCATGCAATGAACGCCAAAAAACGCTGCCAGATTTGCGGTGTCGAACAGAAAAACTTGAAGGCCCTCCAATTTCATACACTCAAATACCATGAAACGCCATCAGAAGCAAAACCGAAAGTAGAAATTTTAAATTCAAAGCCACCACCGGCCCCGGTTAAGATGGAAGACGATGATGTCATCATTCAGCAGTTAGTTCTTGAGGCACTGCCAGAGGCAGATGTCGAATCCGAGGAGGAACGTCCAGAAAAACCATCGATCCAGAGTTTAACAATCCTTCCGAATAGAAGAGCAGAGAAAAAAGAAGTTTCTCGTATAAGCGATATTAAGATGCCCAATCTCAGATCTGAGCTGAGGGAATCTCTGGCCGAGTGTTTGCGTGACCCGATCGACAAGCGAATTGAAGATGATATCAATCGGGATGAAAAGGAATTGAACCAAAACGTTGGTAAACTACTGGACATGTTGGTGGATACTCAGACGCTCAAAAAGTTTGGATGGCCCAAGGATTCTGTTGAGAAGGTCCTTTGCAAAGTCATCGAGAATTGTGGATACGATTTGGAGAATAAAGTCTTCGACGATGATTATTGTACAAGAATGAGGGAGTATGTCAAGTTGCTGTTCACCGTTGTCATACAAAATGACACAATCAAGGAATTGCTAAACAATTTTCCAATCGATGAAGTTATTGAGTTTGTTCTTTCAAACGAAGATGATAACGAAGTAGATGATTAA
Protein Sequence: MVPSFVSSQSTRTTRSRTLNPPNTSKSTEKKLLLNTKTPIKTAADDDVEFVTSSEVTDRPTEHYVLTEFKNDEEEEDEINFVLTDNLDVNAEGPLAECTEEILIDEEVGDGDNTNTNGDEEIDQLVVKTQEIVEHICGKCFKTFRTVKALKRHISFCIFSADLMTRRQEMLKNIDKIEKEALHMHKKDICFCCGDSYDTCHGGHINCSECTKTFKTQLSLERHAFLIHSENDDFPCTVCNGKIRTAALLQLHLDQHATRGKPFACKVCGMDFTRLYHLNRHLKYSTCSGKKVEAMACKVCGKEFVRVDNFRTHLKTHLGDSSTPKKSDYRCPCCKKCFYSLSTLNIHIRTHTGERPFDCDLCDKNFPSLVALKKHRRFHTGEKPYTCSVCNMNFAVKEVLNRHMKRHTGEKPHSCDQCGKRFIQATQLKNHLRTHLRPFECPECPEKFKTKRQMEKHCISHTSKKRNPNAKKQQIEPKSGESNEGVKRRKHKEYNCPDCGIVFKTVPSFLRHEASEEHAMNAKKRCQICGVEQKNLKALQFHTLKYHETPSEAKPKVEILNSKPPPAPVKMEDDDVIIQQLVLEALPEADVESEEERPEKPSIQSLTILPNRRAEKKEVSRISDIKMPNLRSELRESLAECLRDPIDKRIEDDINRDEKELNQNVGKLLDMLVDTQTLKKFGWPKDSVEKVLCKVIENCGYDLENKVFDDDYCTRMREYVKLLFTVVIQNDTIKELLNNFPIDEVIEFVLSNEDDNEVDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -