Stae030814.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sphaerophoria taeniata
Gene Symbol
SALL3
Assembly
GCA_943591125.1
Location
CALSBT010000271.1:154519-162710[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0018 0.21 13.3 0.4 2 23 107 129 106 129 0.96
2 20 0.0025 0.29 12.9 0.3 1 23 135 157 135 157 0.98
3 20 0.0017 0.19 13.4 1.6 2 23 166 187 165 187 0.98
4 20 0.00051 0.059 15.0 1.0 1 23 193 216 193 216 0.96
5 20 0.0078 0.9 11.3 2.6 1 19 249 267 249 269 0.96
6 20 1.7e-06 0.0002 22.8 1.0 1 23 277 299 277 299 0.98
7 20 2.5e-06 0.00029 22.3 1.0 1 23 305 328 305 328 0.98
8 20 0.00036 0.042 15.5 3.2 1 23 339 362 339 362 0.96
9 20 3e-07 3.5e-05 25.2 0.7 3 23 453 473 451 473 0.97
10 20 4.2e-06 0.00049 21.6 1.1 1 23 479 501 479 501 0.98
11 20 0.00016 0.018 16.6 1.9 1 23 512 536 512 536 0.99
12 20 0.0031 0.35 12.6 1.2 1 20 542 561 542 563 0.94
13 20 0.58 67 5.4 3.4 1 23 601 623 601 623 0.97
14 20 5e-06 0.00057 21.4 1.4 1 23 629 651 629 651 0.98
15 20 4.7e-05 0.0055 18.3 1.3 1 23 657 679 657 679 0.97
16 20 5.3e-05 0.0061 18.1 2.3 1 23 685 707 685 707 0.97
17 20 2.7e-07 3.1e-05 25.3 2.4 1 23 806 828 806 828 0.98
18 20 0.00037 0.043 15.5 2.3 1 23 834 856 834 856 0.99
19 20 2.2e-05 0.0025 19.4 0.6 1 23 863 885 863 885 0.97
20 20 0.0013 0.15 13.8 4.2 1 23 891 913 891 914 0.96

Sequence Information

Coding Sequence
ATGCAAAACAACACGGATTTGTTCACCCCATTGCCGGTGGAGCTATCGACGCCCAATGGCCTTCTCTACCAATTCAACGAAACCAAAAATGACTTCTACACCTTCGAAATGGACGGTTTCACTGTGCCCGGGATTGACGATGACATACCGCCGCCAATAGTTGGTTTAAGCCCGATTCCCGAGACCAGTTGTTCATTGATGGTCAATCCTCTGGAGCCGTTGTTCTCTCCTGTCGAAGCACCATCATCATCGTCAGCAATAATTAACACCACGGCCATAATGGCAAGACAAGATGTCTCTCCTCCATTTAAACAACTCTCCTGCGATCTTTGCGAGGAAACTTTCAACTCAACTCAAGCCCTTCGCCTGCACCGACGTGTTCAACACATTGCAACCAAAGAATTCCGCTGTCGAAAGTGTCCGGCGTCGTATAATTTCGAATCAAATTTGGTTCTTCATCTGGCTTCGCATGTTCCCAGCATTAGCACCAATAAACAGTGTCCCGAGTGTAAGATGCTTTTTAAACGAATTTCCAGTTTCAAGGGTCACCTGAAGACACACCAAACAAGTGATCGGTTCAAGTGCAATCGCTGCGACAAGGAGTTCGAATTGAAGGGCTACTTTGAACAGCACATGGTTAAGGCTCACAAGCCCGGCGGCGATATGGTTATGGAAGAGATTCTCTTGAAAGTGGCAAACAACAAAAAGTGCCGAAAAACAACATCAAAACTCGTGAACGGCAAATACAATTGCCAATTTTGCGAGAAAAAATTCACAAAACCCTGCCTGCTGAGGAGGCACGAAGTCTGTCACACTGGAGCCAAGCCATTTCAGTGCAGTCAATGTGAACAGGGATTCACACAGAAGTCGTCGTTGGAACGACACATGCTCCTGCATCAGGGAGTCAGGGATTTCAAATGTCCTTTATGCAGTTACAGCTTCTCACAAAAGAACAACCTTGTTGTCCACATTCAGCGAACTCATCCCCTCAACGCCGTCGATGTTGAAAACAGATTCAAATGTGAATCATGTCCGTGTACCTTTACCAAACTGAGTAGTCTTAATCGCCATCGAGCAATGAATCACCCTGAAAGAGAGGACCCCAATGGCCAACGCAATGACAATGAGGAGGATGAGAATGTGAACGTCGCCAAAGTAATGGAGCAGTTGAAAAGCTTTCAGGAGTCCATGGGAATTGTGAACGTAAAACATGTTGTTTTGGAATCAGCATCGCCGCCGCCATCACCTGGGCCCATGGTAAACACTGTGACAGTCATTGACACCATAAATCCAAGCAAGGAGAAGACCTTCAAAACGGTCAAGGAGGTCATTTACAAAGGAGAGCGGACAATGGCTTGTGTTTACTGTGACAAGCCATTCAAGAGGCAGTATGATCTTTTGAGGCACCAACGAACGCACACCAAAGAGAAGCCCTTCGAGTGTAACATATGCAGGAAAAGCTTTGCAACCAGCAGTGCCCTCAAAACCCACTCGAGCACACATGTGTCTGCAACAGAGAGGCCAGCTCGAGCTTACGAGTGTCCGGTGGAGGACTGTCACAAGTGTTTTGTGTCCACAAGGGCTCTGGACATTCATACAAGAACCCACACAAATTCCATATCCTACATCTGTCCAGTTTGTTCGAAGATCTTCACATCCAAAGCTGGTTTTTTCGCACACAAGCACCACACCAACGATCAGGAGCTCGACAGCATTCGTGATCTCCTCAAGTCACCGGTGCAAATTCATACAAATCCCGACGAGGAGGCGTTCAAGGCCGAGGAGTACTCGAAACGCAGTCACCAGTGCTTTGTTTGTGGCTTGAAGATGCAGAAACTATCCCATCTGCGGCAGCATGAGGCCACTCATTCGGGAGAGAAGCCATTCCAGTGTGAAATTTGTTTCAGGACATATACAACACAGAGTTCCCTCAATCTGCATCTGAAAATCCACACAGCCGAAAAGACACACGTCTGTCAAGTGTGCAATGCCAAGTTCTTCACACAGTCGTTGCTGATACGACACATGATCTCACACAGCGACGAGCGCAACTTTGCCTGTCCCTACTGCGATGAGCGCTTCAAGACCAACGACAATTGTAAGAATCATATTCTAACACATGCTAGAAGTCTGCTTGCAAGTCCTGAACCGGAACCACAGCCGGCATTGGAAGAGTTTCTGGTAGATCCTGGAGGAATTCCAATCGAACCACCACCGCCTATCAGCTCGATTACTCGACAATTTATTGCGGTGGTGCAGAGTCCCGAGAAGAACCTCTCTCCCAAGTTCCTGCAGCTGGAGTTGGTCAAAAACTGCAAAAAGCACAAGCACAAGAATCTGACCATTGAAACACTCAAGAAGGCGAATAAACTCTCTTCCAAGCCTGAACTGGTGCCAAAAATAGCCGAAAGCAGACACAAATGCAGTGATTGTGGAAAGTCCTTCGTCAAACCCAACGATCTGGAGCGACACAAACGAACTCACACCAAGGAGAAGCCATTCCAGTGCAGTGTTTGTTCGAGGCAGTTCGCTTTGATGTCAACTTTAGTGCATCATATGAAGACCCACGACGCCCAGCGGGAGACATTCGATTGTCAGGTGTGTGGCAAGAAGTACACATCGCAGAAGGTTTTGACTGTCCATTTGAGAATACACACCGGCGAGAAACCGTTCCAATGCGGCGTCTGCAAGAAGAACTTTCGAACCTCGGGACACAAGATTTCACATATCAAAGCGCACCACAAGAAGAGGAACTTTCCAATAGAAATCATAAGAAACTTGATACTTCATCAAACACATCAAGTTTCTTCCGGAAATAGGTTGGAAGAGAAGAATGGTGTTTACAAAAGTGTTGTGTATGTTCCCAAACTCTCCGAAAATTTCAAGGAAGTTGTCACCAAAAACAACCCAGACGTGAACTTAGCATATAAGTCAAACCAGACAGCTGCATCTCTATTTACATGCCTAAAGACGAAAACGGACAAGGATCGCCGCTCAGACGTAGTTTACAAAGTAAACTGCAAAGGAAAACCGGACCAACCATGCAATCTCTTCTACATTGGCACAACCAAACAACTCCTTCGACAAAGAATAGCTAATCACAAATCTGACATTCGCCAAAAAAACTCTGAAAAGACAGCACTAGCATGCCACACTATCGGAACAGGACATCAACCAGACTTTGAAGGAGTGGAAATTCTTGCAACGGAGAAACACACATCTAAACGCTACACATTAGAAACACTTCACATAATAAATAACAAAAACAATATGAACCGCAAACAAGACATTCAAAACATATCCGCGGTTACTGTTCCTTGGTTTCAAACACAAATAATTAAACAGTTTCAAATTTAA
Protein Sequence
MQNNTDLFTPLPVELSTPNGLLYQFNETKNDFYTFEMDGFTVPGIDDDIPPPIVGLSPIPETSCSLMVNPLEPLFSPVEAPSSSSAIINTTAIMARQDVSPPFKQLSCDLCEETFNSTQALRLHRRVQHIATKEFRCRKCPASYNFESNLVLHLASHVPSISTNKQCPECKMLFKRISSFKGHLKTHQTSDRFKCNRCDKEFELKGYFEQHMVKAHKPGGDMVMEEILLKVANNKKCRKTTSKLVNGKYNCQFCEKKFTKPCLLRRHEVCHTGAKPFQCSQCEQGFTQKSSLERHMLLHQGVRDFKCPLCSYSFSQKNNLVVHIQRTHPLNAVDVENRFKCESCPCTFTKLSSLNRHRAMNHPEREDPNGQRNDNEEDENVNVAKVMEQLKSFQESMGIVNVKHVVLESASPPPSPGPMVNTVTVIDTINPSKEKTFKTVKEVIYKGERTMACVYCDKPFKRQYDLLRHQRTHTKEKPFECNICRKSFATSSALKTHSSTHVSATERPARAYECPVEDCHKCFVSTRALDIHTRTHTNSISYICPVCSKIFTSKAGFFAHKHHTNDQELDSIRDLLKSPVQIHTNPDEEAFKAEEYSKRSHQCFVCGLKMQKLSHLRQHEATHSGEKPFQCEICFRTYTTQSSLNLHLKIHTAEKTHVCQVCNAKFFTQSLLIRHMISHSDERNFACPYCDERFKTNDNCKNHILTHARSLLASPEPEPQPALEEFLVDPGGIPIEPPPPISSITRQFIAVVQSPEKNLSPKFLQLELVKNCKKHKHKNLTIETLKKANKLSSKPELVPKIAESRHKCSDCGKSFVKPNDLERHKRTHTKEKPFQCSVCSRQFALMSTLVHHMKTHDAQRETFDCQVCGKKYTSQKVLTVHLRIHTGEKPFQCGVCKKNFRTSGHKISHIKAHHKKRNFPIEIIRNLILHQTHQVSSGNRLEEKNGVYKSVVYVPKLSENFKEVVTKNNPDVNLAYKSNQTAASLFTCLKTKTDKDRRSDVVYKVNCKGKPDQPCNLFYIGTTKQLLRQRIANHKSDIRQKNSEKTALACHTIGTGHQPDFEGVEILATEKHTSKRYTLETLHIINNKNNMNRKQDIQNISAVTVPWFQTQIIKQFQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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