Stae005825.1
Basic Information
- Insect
- Sphaerophoria taeniata
- Gene Symbol
- retn
- Assembly
- GCA_943591125.1
- Location
- CALSBT010000029.1:3596103-3637556[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.71 4.3e+03 -0.6 0.0 41 65 54 79 48 90 0.71 2 2 1.1e-20 6.6e-17 62.9 0.0 2 79 227 302 226 303 0.93
Sequence Information
- Coding Sequence
- ATGGTCAACGGAATGACCATGGATTACGTGGGGGGACTAGGTGGCGGCGGTGGCGGTGGTGGCGGTAGGAGTCCCGAACAGCACAACTCAGAAATTCCAATGAGTCACCATCACACACAATTTGGGGCGAACCATCCGTTGGGGGCTTTGGGGAACTTTATGAGCATGGGTGGCCTACATGGCATCCCGAATCTTCAGCAACAGCACAACGATGTGTTGGAAAAGCTAAAAATGCAAGTCCGCGATATGAAAGTGGGCCTTATGGATCAAGAATACCCGCCACACAATAACTTCGGATCAAATGTCATTCCAACGCCTATTAATACGGCATTCACAATTCCGCCAACTTCACACAGCACATTCAATCACTCCCCGCAAAATCTATCACAACATTCGCCACAGCCACAGCAACAGAATTTACTTCCATCAACGCATCAGCAGCAGCAGCAACAACAGCAGCATTCACAACAGTCGCTTTCACAATCAAGTTCCCAATCGATGGCGAATGGTTTCTCATTCACATCACCCTCAGCGCCAAGCACAAAAGACGTCAATCCGGCGTCGAACTCATCAACATCCAGTGAAACATCAAACTCCTCGCAACAAAACAACGGCTGGAGTTTTGAGGAACAGTACAAACAAGTGCGACAGCTCTATGAAATCAATGATGACCCGAAGCGCAAAGAGTTCCTTGATGACTTGTTTTCTTTCATGCAGAAGCGAGGTTCACCGATCAATCGTCTACCAATCATGGCAAAATCAGTTCTTGATCTGTACGAGCTCTACAATTTAGTCATCGCTCGGGGTGGCCTCGTCGATGTCATCAACAAAAAACTTTGGCAAGAGATCATCAAAGGCCTGCATTTGCCATCGAGCATAACGAGTGCAGCGTTCACATTGCGCACACAGTAA
- Protein Sequence
- MVNGMTMDYVGGLGGGGGGGGGRSPEQHNSEIPMSHHHTQFGANHPLGALGNFMSMGGLHGIPNLQQQHNDVLEKLKMQVRDMKVGLMDQEYPPHNNFGSNVIPTPINTAFTIPPTSHSTFNHSPQNLSQHSPQPQQQNLLPSTHQQQQQQQQHSQQSLSQSSSQSMANGFSFTSPSAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694378;
- 90% Identity
- -
- 80% Identity
- -