Basic Information

Insect: Sphaerogastrella javana
Gene Symbol: Znf574
Assembly: GCA_037040025.1
Location: JBANCZ010001331.1:15536-17764[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.041 18 8.6 0.4 2 23 328 350 327 350 0.95

2 10 0.59 2.5e+02 4.9 0.2 6 23 360 377 360 377 0.98

3 10 0.00019 0.083 15.9 0.4 1 23 383 405 383 405 0.97

4 10 0.00012 0.053 16.5 0.7 1 23 418 441 418 441 0.90

5 10 6.7e-05 0.029 17.4 0.8 1 23 449 472 449 472 0.97

6 10 2.6e-05 0.011 18.6 1.0 3 23 480 501 478 501 0.92

7 10 0.0023 1 12.5 0.1 2 23 513 535 512 535 0.97

8 10 8.2e-05 0.035 17.1 2.9 1 23 542 565 542 565 0.93

9 10 2.4e-06 0.001 21.9 1.2 1 23 571 593 571 593 0.98

10 10 5.8e-05 0.025 17.5 1.4 1 23 599 622 599 622 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.041	18	8.6	0.4	2	23	328	350	327	350	0.95
2	10	0.59	2.5e+02	4.9	0.2	6	23	360	377	360	377	0.98
3	10	0.00019	0.083	15.9	0.4	1	23	383	405	383	405	0.97
4	10	0.00012	0.053	16.5	0.7	1	23	418	441	418	441	0.90
5	10	6.7e-05	0.029	17.4	0.8	1	23	449	472	449	472	0.97
6	10	2.6e-05	0.011	18.6	1.0	3	23	480	501	478	501	0.92
7	10	0.0023	1	12.5	0.1	2	23	513	535	512	535	0.97
8	10	8.2e-05	0.035	17.1	2.9	1	23	542	565	542	565	0.93
9	10	2.4e-06	0.001	21.9	1.2	1	23	571	593	571	593	0.98
10	10	5.8e-05	0.025	17.5	1.4	1	23	599	622	599	622	0.97

Sequence Information

Coding Sequence: ATGGCAGCTTGTGTGCTTTGCTTCGGCTGTTGCAAGATTGGAGATTCCTATAAGATTTTCTCCGAGGCAGGTTTGCGGCTTAACatttgcaaaacaataaacaaacatttttggcTAGAGTTGACGAGCGACGGTGGAGATCATGAGGAAATATGCCGCAAATGCTGGGATTGTGTGAGTAgctttaatgcattttacCAACGCGTCTACAATGTACACCAAGAACGCCGGAGCTATGTCAAGAGTGTTCCTATCGAGTTTTGTGGCGAAACGGAGTCGGCGAATCCACTTGCCTTGGGCGGGGAAATGGATGCTTTGGCAGAAGGTTTTTTTGCCGCTGATGTTAAAGTGGAAGTGAATGAACTAGAGCCGCTCCTGAAGCTCGAAATGCTTGATGAGCCAGTGATAAAGGAATCAAAGTCTACTAAACGCACCTCTGCCGAAACTCCTGTTGCAAAGCGGCGaattaaaaaagagaaatgtgCAAAGACCAGTGACTCGGATGGAGATACACCACTGGCCGAGTTCCTAAtcgaaaaatcaacaaaagccTTAGCAGCGAACGAAGAAACACATTCCAAAAGTCGACAATTGCGAAGGAGTACAAGGAGAGGGCGCAGAACAAAAACGCCATCGATATCACCACCTGtaagcttaaaaaaagaattggaaTCGGATGATAATGACCATGACAACGATAAGGACATTGATTTCGTGGCTGCGGAGGCAGTGCTTGGCACAGATGACAGTGAGAGTTCTAGTGAGAGCAGTGATATTAACTCTGGTGATAGTTTGCCTGAAATAGAACCAGAGGAACGTTACGCAGAAATACCCAAAAGAGTTGTggttaaaccaaaaaaatatcgtAAACGAGTTAAACCTCTAATACCACCCGTGCGCATGAGTCGTGAGGAGatccaaaaacgaaaagcacAACAGGATGAATTCGATAagataatatttgatttctttaaaaagCTGCCATGTCATATTTGCAATCTATTGGTTGCTAATTTCGGTGATATGCGACGCCATCTGCGCTTGTCCCACAATATGGAGAGCGGGTTTATAAGTTGCTGTGGTCGCAAGTTCCATGTGCGCAGAGCATTGGCTGACCATGTTCTAGTGCACAAGAATCCTGAGCATTTTATGTGCAGTCAATGCGGACGTGTCTTTCAGGAGTCTAAAGCGCTAGAAACACATGAACAGTCACACACCAACCCCCAGGGAGATTCGAAGGATAAACCGAGCTATCAGTGCGACAAGTGTCCCAAGACATTTACCACAAAAGCTGCGGTCGAATATCATAATGCATCTAAGCATGTACCCAAGTCTGATTTTAAGTATACGTGTCCAGAGTGCAACAAGAAGTTGCCAACGGAGCGGAAACTTAAAGAACATCTACGCTATATGCACGATCCAGAAACGGTTATCATCTGCGATAAGTGCGGTAAAACTTTACGCTCTCAAGCAAATCTTAAAAAACATCACGAACTAGAGCATTCCGATAATCCCCGTCCTAAACCAGATCCAGTTCAGTGTGAAATATGCGGCACTTGGCTACGACAATTGTCCGGCCTGAAACAGCATATGAGTACAGTTCACGAACCACCCGGAGGAGAGCATCGCTGTCCTATATGTGGCAAAAAGTCCATCAACTCTCGAGCACTCAAGCGACACATTTATCACAACCACCAATGCGAAAGAAAGTTCCGTTGCACCATGTGCGAAAAGGCCTTCAAACGACCACAAGATTTGAGAGAACATACATCAACACACACTGGCGAGGTGCTCTACACCTGCCCGAACTGTCCACAAACATTCTTCTCGAATGCTAACATGTACAAACATAGACAACGACTCCATCGCGCTGAATGGGAAGCAGATCGCAAGAAACCCTTGCCACCAAATATAATGCAACAAGCTGTTGGTGCGACGACGGCAATGAAGAAGCGTTCAACGGGCAACCCAGGTCCAGCTCTATTCACACAGCCTGATGCATCTGCTGTGGATGTGCAAAAGCAAGAGCCCAAACTGCAATAG
Protein Sequence: MAACVLCFGCCKIGDSYKIFSEAGLRLNICKTINKHFWLELTSDGGDHEEICRKCWDCVSSFNAFYQRVYNVHQERRSYVKSVPIEFCGETESANPLALGGEMDALAEGFFAADVKVEVNELEPLLKLEMLDEPVIKESKSTKRTSAETPVAKRRIKKEKCAKTSDSDGDTPLAEFLIEKSTKALAANEETHSKSRQLRRSTRRGRRTKTPSISPPVSLKKELESDDNDHDNDKDIDFVAAEAVLGTDDSESSSESSDINSGDSLPEIEPEERYAEIPKRVVVKPKKYRKRVKPLIPPVRMSREEIQKRKAQQDEFDKIIFDFFKKLPCHICNLLVANFGDMRRHLRLSHNMESGFISCCGRKFHVRRALADHVLVHKNPEHFMCSQCGRVFQESKALETHEQSHTNPQGDSKDKPSYQCDKCPKTFTTKAAVEYHNASKHVPKSDFKYTCPECNKKLPTERKLKEHLRYMHDPETVIICDKCGKTLRSQANLKKHHELEHSDNPRPKPDPVQCEICGTWLRQLSGLKQHMSTVHEPPGGEHRCPICGKKSINSRALKRHIYHNHQCERKFRCTMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPQTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMQQAVGATTAMKKRSTGNPGPALFTQPDASAVDVQKQEPKLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00901697;
90% Identity: -
80% Identity: -