Sjav018943.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- CSRNP1
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010013656.1:1-1182[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.23 8.9e+03 -1.0 0.3 73 109 52 88 35 103 0.51 2 3 0.83 3.1e+04 -2.8 0.0 27 64 194 235 192 254 0.60 3 3 1.2e-30 4.4e-26 94.8 0.1 2 88 263 345 262 358 0.82
Sequence Information
- Coding Sequence
- ATGTTCCGTCCGATCAAGAAAATATTCACCTACATTCAGAAAAATGCCAGCAATGGCACAATGTTTGGTGGCACAAGCAGTGTAAATTCAGACAATGTTGTGGCCGGAAacagcagtcgcagcagcgACAGTGGAGCGACCAGGCTAGGCCAGGAGACGAAGATGAAGGTGGCTGTGgaagtagaggtagaggtagaggtagagaaTCAGCTGGATCTGGTCTCTCAAGAGCTggaagatgatgatggtgatgaatTGGAGGAACAGTTTCTCGAACTGGATCATTTTCCTAATAATGAGATTATTGTTATAAGCGACAATGAACTGAATTCGTCACTGGCATCCGATAATATCTCTGAGGATCCACTAGCTATTGATGATTTTGCGCAGCCTTTAGCACGTGGCGGTGAGGAGGATCACGATGAGGATGAAGATGCTGGTGTGGAAAATAATGGTGATTTATTATGGCTCAAATTGGACACACCGCACACACAGGTGGTGGAGGTAACAATACCTCCTCCAAATGGACCAACTACTGCAATCAAGCCACCTGCAAAGACCAAAGAAGAGGAGCTGCGCAGCGATGGTGGCTCTGATTCAGGCTTGGGCAGCGAAAACGATAGACAtaatgcaacagctgcagccacAATCACAGCATCAGCTTCAAGCAGAACATCATTGCCGCTGCGCTCCAATTTAAAGAGACGCTTGGAGGATGATGCCATTGAACTGGCCTTGGCGCCAGATAGCGCTGCGTCCTCCTCAGCATGCACGATACAGAAACGCTCGAAGcgttcaattaattttgatagCGTCAAGGTCTACTACTTCCCACGTCAGCAGGGCTTCAGTTGTGTACCCACGGCCGGTGGCTGTACGCTGGGCATGGGCGCCAGGCATATCGCCTTCAAAACAATGACTCTCGCTGAGCATGCGTCAGAGTTGCGGCGGGCGCATCGTAGCCAAAACCAggaacatcagcaacagctgcaggcACGTGGCTCCAGCAGTGATGACAGCGAGGAATCTGAAGAGGATTATCTCAGCGAAGGCAATGAGCCCTGGGGGTTGCCCGTCCGCGGCCAGGTCGAACGCTCGATCCTCAGTGATCAGCAGCCGGTGCAGCGCCAGACCTATTCCTACCGCGACACCACCCGTCACTTCTTCGGCAACTACCCCCCC
- Protein Sequence
- MFRPIKKIFTYIQKNASNGTMFGGTSSVNSDNVVAGNSSRSSDSGATRLGQETKMKVAVEVEVEVEVENQLDLVSQELEDDDGDELEEQFLELDHFPNNEIIVISDNELNSSLASDNISEDPLAIDDFAQPLARGGEEDHDEDEDAGVENNGDLLWLKLDTPHTQVVEVTIPPPNGPTTAIKPPAKTKEEELRSDGGSDSGLGSENDRHNATAAATITASASSRTSLPLRSNLKRRLEDDAIELALAPDSAASSSACTIQKRSKRSINFDSVKVYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQEHQQQLQARGSSSDDSEESEEDYLSEGNEPWGLPVRGQVERSILSDQQPVQRQTYSYRDTTRHFFGNYPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -