Sjav002579.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010000449.1:15114-30150[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3 4.5e+04 -3.2 0.1 28 45 411 429 411 429 0.93 2 4 4.4 4.6e+04 -3.2 0.7 5 13 709 717 709 723 0.85 3 4 1.2e-18 1.2e-14 56.3 0.0 1 43 902 945 902 947 0.95 4 4 5 5.2e+04 -3.4 0.7 2 23 1136 1155 1135 1156 0.83
Sequence Information
- Coding Sequence
- ATGGCAGGTGAACGACTGCTCGACTCAGTATCAAGCACTGACTCAGCGCTCCAGCAGTCAGCTGACAAGCTTGCCCTTATATTGGATGGCTTAGAACGTGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATATAGATCAACTGACGACCAACCAATTGAATCTTGCAGAGCAACAGCCCATATCAATAACGACAGAGTCCGAgtacaacaactgcaacaacagcaacagcaacaacagcaacatcagcaacaacaacaacagcaacaagatcGAGAAACATTGCATACCACTGAACCACCGTTTAGAAGAGCCCAACGGTCAACATTTCAACTCCTCACCgcaaattctaaaatattttaAAAACAAGCAGACATCACACGATCACGACTCAAGCGCAACATCACGCAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGATACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACTGTAAACGCCGTTGGCGAATTGGTGGTCGAAACATCAACGGCcagccacaacaataacaacaacaacaacaacaacaacaacagcagcagtgttGTAACGCAGCACGATAGCGACAGCAACTCGAGCGCATCActctacaacagcagcaacagcaacaacaacaacaacaataacagggctcgtaatacaacaacaacaactgcaacagcagcaacaacctcAATAGAACTGCATAGGCTGCTCAGCCAGCAAACAGCAGATATGACATCAATGGAATCAATAGCCGCCAAACTGGCACAGTTCACCGTGATGAccgatttcaatttgatgagTACGCTGGctaatcaacaacaacaacaacagcaacaacaacaacaacaactacagcacaCTAACTCGGTAACGCCAACTACCTCAGATGTCACAGCTGCCACTGTCGCTGCTGCAAGTCCCACACTCAAAGACACGCCCAGTCCCAGTGCAGATGCGCCCCTGGATCTTAGCAGTAAACCATCGCCAAATTCACCCACAAGCGGTGATATTAAATCAGTCAGACATCATGACTCTGGCACGCCACTGCCGGCAGAGCGACGCGCATGCATCGAAGAGGAACTGGATGCGTTTCAGAAGCTGCTGGCGAAGGAGCGTGGAAGCCGAAAGGCAGCCaatcaattgcagcagcagcaacagcaacagttgcagccgcagcagcagcagcagcacgtgcCACGCTCCAATCTGCGCAACAAACTGTGCAAGACGTCACCTGAGCTGAAGCGAGTGAATGTGCAAATGCCGCACCTTCTGCCACGGTGGCAACACGAAATGGAACGTGATGAGCCTAACGAATCCGATGAGGAGCTGGGCGATGGCGATAGTAATGCATCGACGCCGGTGTCGGGCTTTCAGGAGTTCACGCAGCGTCTGGCCAGCGGCGAGAATAAGCTGAGCAGCATGGTAGAGCACAACGGCAGCGATTTGGGCGATGATCTGGAGGCGGAGATGTCACCAAAGCTGGAGCACAGACCACAGAGTGGAACACCGACGGCCACGgcagtggctgctgctggtggagcGGTGGGTGCTGGTGAGCCCATGTCACTGGACATTCGTGTGCTGCTCCAAACGCTGATGATGGCGGCAGGTTACGGTGTGATCAACAAGGTGGATAGCACCCAGACGCTGGCAGATCTTTATAACACAGTGCTGGTGGCCAGCAGAGGTGGCATCATGAACGAGGGTCTGTCACATGCCCTGGAGAGCAATGGCAGTGGGACGCTGCTTGATCAGCGACTAttgcaacagcaccaacagcagcagcagcagcagcagcatttgaaCGCTGTGTATCGACGACATTTACCAAAGTCTGAAACGCCGGAGACGAGCTCCTCGATGGATGCGAACGATGCATGCGAGGATCCCATATTGAAGATTCCGTCCTTCAAGGTTACTGGAGCGGGCAGCATCTCGCCCTCGCTGCactgcaacaccagcagcaacaacagcaacaccaacaacaataacagcaacaacaacaacaacatcaacagcaacaacatctctATCAACAGTAACAACCGCAATGGCGCAAGTCCGCACTCAGCCTCACCCATGctagcagcagctgttgctgctgtcgccgccaacaacagcttcaggcacaacaccagcaacaacagcagcagcagcaacaacaacaatagtaacaacaacagcagcagcggtgccGTCAGCAACACTCTGCTTAGCTCCTCGCCCACATCCATACAAAAGATGATGGCCTCTACCATACAGCGCCAGATCAATGAGCAAAACAGCCAGGATAGTTTGCTGGGGCGCGATAGACGCAACAATGGTAACACTAGCGGCAGTGAGTGCAGCAGCACGGGCGGTGgcagtgttggtgttggtgttgcagctgctggcaATGGGATTgggggcagcggcagcagcagtagcagcagctacaagAAGCCAAGTATTTCGGTGGCCAAGATCATTGGCGGCACGGATACCTCACGTTTCGGCGCCTCACCCAATCTGCTGGCGCAGCAACATCACAGCCATCTGCCCCCACATCATGCCCATCACCAACATCAttcccagcagcagcagcagctcagtcCACAGGATGCAGCAGCGCTAGCCGCCGGCAAGGGAACACGGCCAAAGCGTGGCAAGTATCGCAACTATGATCGGGACAGTCTAGTCGAGGCGGTCAAGGCGGTGCAGCGTGGAGAGATGTCAGTACATCGTGCGGGTAGCTACTATGGCGTTCCGCATTCCACGCTGGAGTACAAGGTGAAGGAGCGGCATCTGATGCGTCCGCGCAAGCGTGAGCCCAAGCCGCAGCCAGATCTGGTAGGTCTGACGGGGGCCGCCAACAAGATCACGCATCTGGACAAACTGAAGccgggcaacagcagcagcagcagtggtgggggcgccagcagcaacagcaacaacagctccaAGCTGAGCAATGCGCtcaaaaataacagcagcagcgccacagcagcagcggcggcagcggcagcagcagccacagcgaATGGCCTGAAGCTACCGATCTTTGATACGGCACCACAGCTATCCTTTCAGCCAAGCATGTTCTGGTCGCAGCCCAACGCCAGCACTAACTATGCCCTCGAGCTGAATCGTAATCCCGAATTTCTGAAAAACTTTGGCGTTGCAGCCAATCACCATGCCCACGGCGGAGTGCATCTGAAGAGTGCGTTGGAGTACGCCGAGAACATGTACGATGACATTATCCGGAATTCGCTAAAGAATGATGTGGAGGCGGTGACTGCCGCcggcggcaatggcaacggtaATGCGCTACTGGATCAGCTGCTGGTGAAGAAGACGCCGCTGCCCTTTACCAATAATCGCAGCAACGATTAcatcgctgccgctgccgctgcctcctCCAATGAGAGCGTCAAGCGTGCCGGTAGCCCACAGCCTGCCTACACGGATGTGAAGCGAGAGCGTCTCAGTCCGGCACATGAGAGTGCTGCCAGCAGCGATGAGGATGCCGAACAtgccacacacaacaacaacaacaacaataacaacaataacaataacaacaacaacagtgaacTGGCgcacaacaagaacaacagcaacaacggcaacaacagcagcagcaacaccaataaaAATGGCAACGGACGGAGTCGCATGACGTCACGCGACTCGGAAACGGATGCCAGCAGCCTCAAGAGCGAACAGTCGCACAGTCCGGCCCACTTAGCGCACACCGGCAACAAAATGATGGATctcaatggcagcaacagtgtCAAATATGAGCCGGAGCCCACAAgacctgccacgcccacaaattCCATACTGCACGACAAGCTGGCCCAGATCAAGGCCGAGCAATCCGATTTTGCCAACGCAGAGGAACAGTTATAG
- Protein Sequence
- MAGERLLDSVSSTDSALQQSADKLALILDGLERVAEEFMGRRKWKHYIDQLTTNQLNLAEQQPISITTESEYNNCNNSNSNNSNISNNNNSNKIEKHCIPLNHRLEEPNGQHFNSSPQILKYFKNKQTSHDHDSSATSRSSGSPSPPPEPNDWIPSDKCNFCVNGRLLTVNAVGELVVETSTASHNNNNNNNNNNNSSSVVTQHDSDSNSSASLYNSSNSNNNNNNNRARNTTTTTATAATTSIELHRLLSQQTADMTSMESIAAKLAQFTVMTDFNLMSTLANQQQQQQQQQQQQLQHTNSVTPTTSDVTAATVAAASPTLKDTPSPSADAPLDLSSKPSPNSPTSGDIKSVRHHDSGTPLPAERRACIEEELDAFQKLLAKERGSRKAANQLQQQQQQQLQPQQQQQHVPRSNLRNKLCKTSPELKRVNVQMPHLLPRWQHEMERDEPNESDEELGDGDSNASTPVSGFQEFTQRLASGENKLSSMVEHNGSDLGDDLEAEMSPKLEHRPQSGTPTATAVAAAGGAVGAGEPMSLDIRVLLQTLMMAAGYGVINKVDSTQTLADLYNTVLVASRGGIMNEGLSHALESNGSGTLLDQRLLQQHQQQQQQQQHLNAVYRRHLPKSETPETSSSMDANDACEDPILKIPSFKVTGAGSISPSLHCNTSSNNSNTNNNNSNNNNNINSNNISINSNNRNGASPHSASPMLAAAVAAVAANNSFRHNTSNNSSSSNNNNSNNNSSSGAVSNTLLSSSPTSIQKMMASTIQRQINEQNSQDSLLGRDRRNNGNTSGSECSSTGGGSVGVGVAAAGNGIGGSGSSSSSSYKKPSISVAKIIGGTDTSRFGASPNLLAQQHHSHLPPHHAHHQHHSQQQQQLSPQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKITHLDKLKPGNSSSSSGGGASSNSNNSSKLSNALKNNSSSATAAAAAAAAAATANGLKLPIFDTAPQLSFQPSMFWSQPNASTNYALELNRNPEFLKNFGVAANHHAHGGVHLKSALEYAENMYDDIIRNSLKNDVEAVTAAGGNGNGNALLDQLLVKKTPLPFTNNRSNDYIAAAAAASSNESVKRAGSPQPAYTDVKRERLSPAHESAASSDEDAEHATHNNNNNNNNNNNNNNNSELAHNKNNSNNGNNSSSNTNKNGNGRSRMTSRDSETDASSLKSEQSHSPAHLAHTGNKMMDLNGSNSVKYEPEPTRPATPTNSILHDKLAQIKAEQSDFANAEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -