Sjav004554.2
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- kn
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010001186.1:750-7035[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-138 3e-134 451.1 0.0 182 385 15 247 9 252 0.98 2 2 1.2e-06 0.027 15.4 14.3 424 519 252 346 246 368 0.58
Sequence Information
- Coding Sequence
- ATGCCCTTAAGGCGTCATCCTCATCCCCAACCAACTGAGGGGAGCTTTTTCCTCAAATTCTTCTTGAAGTGCAATCAGAACTGTCTCAAAAATGCTGGCAACCCGCGCGATATGCGAAGATTTCAGGTGGTCATCTCCACTCAGGTGGCCGTAGATGGGCCACTATTGGCCATATCGGATAATATGTTCGTGCACAACAATTCGAAGCACGGACGACGAGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCTTTGCCGGTGGCCACGCCCTGCATCAAAGCGATATCGCCCAGCGAGGGCTGGACTACAGGTGGCGCCACCGTCATCATTGTCGGCGACAATTTCTTCGATGGCCTGCAGGTCGTCTTTGGCACAATGCTGGTCTGGAGCGAGCTAATCACATCGCATGCGATACGCGTCCAAACACCGCCACGTCACATACCCGGCGTCGTCGAGGTGACGCTCAGCTACAAGAGCAAACAGTTCTGCAAGGGATCACCCGGTCGCTTTGTCTATGTCTCAGCACTCAATGAACCCACTATTGACTATGGCTTCCAGCGGCTACAGAAGCTCATACCAAGGCATCCGGGAGATCCGGAGAAACTGCAAAAGGAGATCATACTGAAGCGTGCCGCTGACCTTGTCGAAGCCCTCTACTCCATGCCCAGATCACCTGGTGGCTCCACCAGCTTCAACTCCTACGCTGGCCAACTGGCGGTCAGCGTACAGGACGGCACCGGCCAGTGGACCGAGGATGACTACCAGCGTGCCCAGTCGAGCAGCGTCAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCCACGCCGCACAGCTCCGGTGGATCCTATGGGGCGACAGCGGCCACCGCTGCCGTTGCAGCCACCGCCAACGGCTATGCGCCCGCACCCAATATGGGCACACTGTCATCGTCGCCGGGCAGCGTGTTCAACTCCACCTCAATGTCCGTATCGACGCCATGGCATTCGGCTCTAGTGCAGCATCATCATGCCACAACAGCGGCACATACGCACCATTATCCGCATCCGCACCAGCCCTGGCACAATCCCGCCGTatccgcagcaacagcagctgctgtttaa
- Protein Sequence
- MPLRRHPHPQPTEGSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAATAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHATTAAHTHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00521135;
- 90% Identity
- iTF_00510322;
- 80% Identity
- -