Sjav022394.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- -
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010019379.1:272-1252[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-09 2.8e-05 27.0 0.0 23 89 141 199 126 199 0.80 2 2 1.5 2.2e+04 -1.5 0.0 76 88 257 269 232 271 0.73
Sequence Information
- Coding Sequence
- ATGAACAACAGTCGAGAACAGCTGCACTGCAGCAGAAAAGGATGTAGTTATACCACCAACAGATCATACAATCTAGAACGTCATGAGCGAAACCATGCCAAAGGCAAAGTGCCTGTATCCCAGTGCCAGCCCTGTCCACATTGTAGCTATGCCGCCGGCTCACTACATAATCTGATGCGGCACATTGGCAAGAAGCACATTGGTATGAGTGTTAAAATGAATGAGCCGGAAATACTCATATGGGAATCGGATGACGAAGATGCGCATGTAACTGGCATTGATGATCCCCTAGCTCACATTGAAATTACTGCCATTGATGATGAACCTGCGCCACTAAATAAACTGGGCGCATCGCTGTGGTATTGGAACAACCCGCAGCAACGAGAGCGAAATTTTCGCAGACGCAGTGGACTCGGCGAAGAATGTACAATAGCGGCGCGCAGCGTCAATACGTTTAAGTTTTACTCATTAGTGCAAAACAGAGGCGGTGCTCTCCATGTCGATGAATGGAAGGACATTGCCCTTGTGCTAGGCCTGCCACCAGATTCTGGGTCCAGTGCACATGACAAGTACATGGACACAATATTTGAGTATGAGAAAAAGGAGAAGCAACGCATCGAGGACTGTAAGCACATGACGGGCGTCCCTGCTTGGTGGGATGACGGCGATTATGTCTATGACATCACCAATGGTACGTCCGCTGTCGAAGAGTTGGGCATTCAATGGTGGAAAAATGCGAACGGACCACCTGTAAGCGTTCGAAATGTCATTTTAAGAATGATATACGACAAGTACTACAGgcattatttgaataatagcAAACCGTTTGAGCCATTCCATGTGAAGGATTCGTGGCTCGTGGCAACAATGTTAAATTATCAGTCACTAAAATCTCAAATGCGCTTTaggcaatttaattaa
- Protein Sequence
- MNNSREQLHCSRKGCSYTTNRSYNLERHERNHAKGKVPVSQCQPCPHCSYAAGSLHNLMRHIGKKHIGMSVKMNEPEILIWESDDEDAHVTGIDDPLAHIEITAIDDEPAPLNKLGASLWYWNNPQQRERNFRRRSGLGEECTIAARSVNTFKFYSLVQNRGGALHVDEWKDIALVLGLPPDSGSSAHDKYMDTIFEYEKKEKQRIEDCKHMTGVPAWWDDGDYVYDITNGTSAVEELGIQWWKNANGPPVSVRNVILRMIYDKYYRHYLNNSKPFEPFHVKDSWLVATMLNYQSLKSQMRFRQFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -