Sjav017321.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- osa
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010011321.1:1441-3378[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 2.7e+04 -1.8 0.0 14 46 247 282 241 285 0.71 2 2 1.4e-14 1.9e-10 43.5 0.0 3 51 493 541 491 542 0.94
Sequence Information
- Coding Sequence
- ATGGGCTCTGGTCCGCCGGGTACGCCGAATCCACAGCAAGTAATGAGGCCTACTCCATCTCCTACTGGCTCCTCAGGTTCGCGATCTATGTCTCCTGCAGTGGCACAAAATCATCCAATCTCTCGTCCGGCGAGTAATCAGTCAAGCAGTGGTGGGCCTATGCAGCAACCTACAGTTGTTGGCGGACCGCCGCCAATGCCGCCGCACGGCCTACCAGGTGGGCCATCATCTCAGCAGCAAtctcagcagcaacagactTCAAATTCAGCGTCGTCGGCTAGCAATTCGCCGCAGCAGACACCGCCACCAGCCCCGCCGCCAAATCCAAATATGAACAATAtggcaacaccaccaccaccgccgcaaGGCGCTCCAGGTGGCTATCCAATGCCGCAGCATATGCATGGCACTTACAAGATGGGTGGACCAGGACAAAGTCCGGGCGCTCAAGGATATCCTCCGCAGCAGTATCCACAAGGTAATTATCCGCCACGCCCACAGTATCCGTCAGGCGCGTATGCAACCGGGCCACCGCCTCCGCCAGGTAGTCAGGCCGCCGGCGGCGTCAACAATATGTCAGCTAACGCACAAGGCGGCTATCCTAGATCGATGCCCAATCACAGTGGTGGCAGTCCTCATCCACAGTATCCACCATATCAATGGGTGCCGCCTTCACCCCAGCAATCTGTGCCAGGCGTCGCCCCGGGACAAATTGGTGGCCAAATGGGAAATCATGTGCAAGGCAAGGGCACACCGCCACCCGTCGGTCCACCACCACCAGGCGGTGCTGGCTCGCCACGGCCCCTAAACTATTTGAAGCAGCATTTACAGCACAAAGGTGGCTATGGCGCCAATCCAGCTGGTCCACAACCACAAGGCTACGGCAATGGACCGAATGCAATGCATCCAACCATGCCCATGGGACCGCCCCATCACATGGGTCCACCTCAGAGCATGGGCCCACCCACAAGCACACCGCCGCAGTCTATGCTTGGCGCACAGGCAGGCAGCGATAGTGGTCCCGAGCATATATCGCAGGACAATGGCATAAGCTCGTCCGGTCCATCGCCGTCAGGAGGAATGCATGCAGTAACATCAGTGGTTACAACTGGTCCAGACGGCACGCCCATGGATGAAGTTAGTCAGCAGAGCACGCTCTCGAATGCATCGGCTGcATCGGGTGAAGATCCACAATGCACCACACCAAAGTCGCGCAAACACGATCCGTATAGCCAAAGTCATTTAGCACCACCGAGCACTTCGCCGCATCCGGTCGTAATGCATGGCAGCGGTGGTCCAACTGGCGAAGAGTACGACATGAATTCGCCACCCAACTGGCCACGCCCAGTTGCTAGTTCGCAGGTGTTCAACAGTCATGTTCCTGTACAACAAGAACCATTTCGCAGCACCATTACCACCACAAAGAAGTCGGATTCGTTGTGCAAATTGTATGAGATGGATGAGAATCCCGATAGGCGTGGCTGGTTGGATAAGTTGCGTAACTTCATGGACGAACGTCGGACGCCGATTACAGCGTGTCCGACCATCTCTAAACAGCCACTCGATTTATATAGgttatacatttatgtaaaaGAACGTGGCGGATTCGTCGAGGTATGCAAGGTGCCGTAG
- Protein Sequence
- MGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVGGPPPMPPHGLPGGPSSQQQSQQQQTSNSASSASNSPQQTPPPAPPPNPNMNNMATPPPPPQGAPGGYPMPQHMHGTYKMGGPGQSPGAQGYPPQQYPQGNYPPRPQYPSGAYATGPPPPPGSQAAGGVNNMSANAQGGYPRSMPNHSGGSPHPQYPPYQWVPPSPQQSVPGVAPGQIGGQMGNHVQGKGTPPPVGPPPPGGAGSPRPLNYLKQHLQHKGGYGANPAGPQPQGYGNGPNAMHPTMPMGPPHHMGPPQSMGPPTSTPPQSMLGAQAGSDSGPEHISQDNGISSSGPSPSGGMHAVTSVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQSHLAPPSTSPHPVVMHGSGGPTGEEYDMNSPPNWPRPVASSQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDENPDRRGWLDKLRNFMDERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -