Sjav015944.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- cnc
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010009569.1:725-2475[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-17 3.6e-13 51.9 4.4 3 62 363 422 361 425 0.94
Sequence Information
- Coding Sequence
- ATGGTGGATAACAGCACCAGCAATAACTCGTCCGTTCTGGGACTGCCTGGTAACGGCGGACATGTGGGCAACTCCGGCGGCTCCGCTGTGTCTGCCGTAGGtcatgcgaatgtgaatgctggtgttggcgttggtgtAGTCTCTTCTATGAGCGCTGGTGCCGCTgtgggtggtggtggtggcggtgttgctgctactgctggtgGTATGACCACTGATTTGTTGGCCAACGGCGGTGGAGCTGGAGCACAGGGTGGCGCTGATCGTTTGGACGCGTCCAGTGACAGTGCGGTCAGCTCAATGGGCTCCGAGCGTGTACCCTCGCTCTCCGACGGCGAATGGGGCGAGGGCAGCGATTCGGCGCAGGATTATCATCAGACCACCAAGTACGGTGGTCCCTATGACtttagctacaacaacaacaacacacgcCAGCCCCCAGTGGCCCAGAAGAAGCATCAGCTATATGGCAAGCGTGATCTGCACAAGCAATCGCCGACCAGTCTGCCATCcgcggctgctgcagcggtACCTGCACCGGCGCCCAATCAACAGCCCCAGGTGCAGAGCATCAAGTACGAGTATGAGGCAGGCGCCGGTGCGGCCAGCTTTGGCGGCATGCAACGCAGCGGCAGCGTGGGCGAGGCCGCAGCCATGGCGCCCGTCTTGGCCAAGGATTACCATCAGGCGTATGGCAtgagcgccagcagcgccttcCCCGCAGACTATGGAGTGCCACGTGCCCCACTCACGCCACAGGATCTGGTACAACTGAATCACACCTATGCGTTGCCGCATGCCAACCCAGGCGGTGCCCTGCCACAGGGCAGTGGTTCGCTCAACAGACCTCAGGTGCGAGACAAAAAACCCGCTGCGggccacaagcaacaacaggcgaagggcaatggcagcggcagtagcagcagcagctccagccTGCAGGAGGATGAGCATCTGTCGCGTGACGAGAAGCGCGCCAGGGCTTTGAATATACCCATAGCCGTGGGCGACATCATCAATCTGCCCATGGATGAGTTCAATGAGCGTCTGTCCAAGTACGATCTGAGCGAGAATCAGCTGTCGCTCATCCGCGACATACGCCGACGTGGCAAGAACAAGGTGGCCGCACAGAATTGCCGCAAGCGTAAGCTGGATCAGATACTCACGCTCGAGGATGAGGTCAATACGGTGGTCAAGCGCAAGACGCAGCTCAACCAGGATCGCGATCATCTGGAGGGCGAACGCAAGCGCATTTCCAACAAGTTTTCTATGCTGCATCGCCATGTGTTCCAGTATCTGCGCGATCCGGAGGGCAATCCCTGCTCGCCAGCAGACTACAGTCTGCAGCAGGCAGCCGACGGCTCAGTGTATTTGCTGCCGCGCGACAAGAGCAACGACACGGCACCAACAGcagccggcagcagcagcagcaacagcggcagcagcagcttgcaTGGCGGCCATCATCAGGTGCAGTCGATgccactgcagcaacaacagcaacagtcgcgCTTGCCGCCAcatttgcaacagcagcagcagcagcagcagcaaacacagTCCACACATCATCAGCTGCTCACGCAGCAACAgtcacaacagcagctgcaacagcagcaacaacaacaacagcaacaggcgccgcatcagcatcagcatcataaGGAATGA
- Protein Sequence
- MVDNSTSNNSSVLGLPGNGGHVGNSGGSAVSAVGHANVNAGVGVGVVSSMSAGAAVGGGGGGVAATAGGMTTDLLANGGGAGAQGGADRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQTTKYGGPYDFSYNNNNTRQPPVAQKKHQLYGKRDLHKQSPTSLPSAAAAAVPAPAPNQQPQVQSIKYEYEAGAGAASFGGMQRSGSVGEAAAMAPVLAKDYHQAYGMSASSAFPADYGVPRAPLTPQDLVQLNHTYALPHANPGGALPQGSGSLNRPQVRDKKPAAGHKQQQAKGNGSGSSSSSSSLQEDEHLSRDEKRARALNIPIAVGDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNTVVKRKTQLNQDRDHLEGERKRISNKFSMLHRHVFQYLRDPEGNPCSPADYSLQQAADGSVYLLPRDKSNDTAPTAAGSSSSNSGSSSLHGGHHQVQSMPLQQQQQQSRLPPHLQQQQQQQQQTQSTHHQLLTQQQSQQQLQQQQQQQQQQAPHQHQHHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -