Sinv012233.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- pnr
- Assembly
- GCA_016802725.1
- Location
- NC:14570631-14599821[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.56 1.1e+03 -1.1 0.2 2 13 232 248 232 255 0.75 2 2 9.7e-17 2e-13 49.4 5.1 1 35 428 461 428 462 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCAGAAATTCTACGAGCTGTGTCGCCTTTGTTTATCCCTGGAAGGTGCCAAGTATCACATATTCGAGGTGGGCGACGATCAGCATAATTTCGCCGAGAAGATATCGGCGTGCCTGTCAATCACGGTAAAAGATGGTGATTCTTTACCACCAATTATCTGCCAGCGGTGCGTATACAAGTTGAATACGTTGGACAAATTTCGTGAAGTATCGCAACAGTCTGACGTCTTACTCAAACAGTACCTGGAATATACCAAGCAACAGTCATCTCATGACGAGCAGCAAGAGTCTTTCTCCACTGCCAAAGTAGCGGGCGAAAGTAGCCCTCTGCAATCGGTCCTTGTGTTGAATAGGAAACTGTTCAACGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTAGAGTTACAGAGCAGCGATATGCGAGAACATGATAATATTAAGTGCGAGCCAGACGATGACGATAGTTCCAACAGTTCCGATCCAGAACGATTGGAGATTGAAGATCGTGACGTGCAGGAAATCGATGGCGAAGAAAATGGTTACGATATGACCGTCAGTAAGAGGATCAGAATCGAGAGCAACTACGATGGCTCCGAGTCTAACACGGCGAATTGTAGTCCAGTTAATAGAATGGACACCCCGGAGAGCAACTGCTCTGACACTAACATTGATCAGGAAACCACGAAACTGTGGCAAGCTTTAGCCAACAACAGAAGCTTGGAAATTACGCGGACAAATGGTGATAAACTAAACAATGGATTCACCGGTGAAGCGACCAATCTGCTGCGTTCTTTGATCAACAATAGGCAGATCGGTATTACTGCCATTGATTCGGACAAAATATCCCCACAAATCAGATTTTATAAGGATACCCAAGGGACAGTTAGCGAGCGTTTGTCGACCGATTTTCCTGTGCTCGGTAATCGTACCAATATAGGAAGCTTAGAAAATAAGTCTGTACAGCGTGCTTCGATAGACAGCAATCCATCTAGCCCTGCCAGCATTGGTCGTAAAGAGATGGCGACGACGACAAAAGGTCGCAGAAAACAGAGCTATCCCAGTAAAGCTCCAGCAAGTCCGGATATTGTTGCTAGTTACCAACACGAACAAAACAACGAGGAGCAAGCACATGATTTTACCACGTGGtcaagcaaaataaaaaataagATGGATGATCAGAAGCAACAGTTTGATCAGCAGAGTGGTAATGTGGCAAAAAAGATAGATATGTCTTGTACAAATTGCGGCACCATGACAACAACCATCTGGAGAAGGAACATGAAGGGTGAGATGGTGTGTAACGCTTGTGGATTGTACTACAAGCTGCACGGTGTTAATCGCCCAGTTACTATGCGAAGGGACACTATACACACGCGCAGGCGTAGACCCAAAGGCGAGAAACCAATGAGGCATAGAAaaaaaGGAGACACAGTCTTAGCGTCTCAGTCGGCAAGAGATCAAATGGATGCCGAGAGTGCGGATATGCTAAATGCTCTTCGACAACAAATTCATCCTCAGCTGATGATGCATGCAGCATTGACGCCTACGCGCATACCCGGTGGCCATCCACCTCCGCCAGTTGCTTACTCAATACCTTTATCTAATTACATGATTCATCAACATGTGAAAAACGAGGAGCGTATGCAACGACACTTATCCGTGGATGAGGAAGCAGACGAAGGCGATGAAGAAAACGTCTCCGACGTTCCCCTCAACCTGGTAGCAACTTCGCTCTCCGAGGAGCATTAG
- Protein Sequence
- MFDVPQKFYELCRLCLSLEGAKYHIFEVGDDQHNFAEKISACLSITVKDGDSLPPIICQRCVYKLNTLDKFREVSQQSDVLLKQYLEYTKQQSSHDEQQESFSTAKVAGESSPLQSVLVLNRKLFNEEPNSEPASINQNIIPQTQTHHLELQSSDMREHDNIKCEPDDDDSSNSSDPERLEIEDRDVQEIDGEENGYDMTVSKRIRIESNYDGSESNTANCSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAIDSDKISPQIRFYKDTQGTVSERLSTDFPVLGNRTNIGSLENKSVQRASIDSNPSSPASIGRKEMATTTKGRRKQSYPSKAPASPDIVASYQHEQNNEEQAHDFTTWSSKIKNKMDDQKQQFDQQSGNVAKKIDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPMRHRKKGDTVLASQSARDQMDAESADMLNALRQQIHPQLMMHAALTPTRIPGGHPPPPVAYSIPLSNYMIHQHVKNEERMQRHLSVDEEADEGDEENVSDVPLNLVATSLSEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_01354989; iTF_01406177; iTF_01408722; iTF_01406900; iTF_01409622; iTF_01407832; iTF_00885571; iTF_00766063;
- 80% Identity
- -