Basic Information

Insect: Solenopsis invicta
Gene Symbol: ttk
Assembly: GCA_016802725.1
Location: NC:21405559-21438905[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.4 1.2e+02 3.1 0.4 6 20 370 384 369 386 0.93

2 9 6.2e-07 5.5e-05 23.1 2.6 1 23 633 655 633 655 0.98

3 9 2e-05 0.0018 18.3 2.0 1 23 661 683 661 683 0.98

4 9 1.3e-06 0.00011 22.1 0.3 2 23 692 713 692 713 0.98

5 9 4.1e-05 0.0036 17.3 0.1 3 23 721 741 719 741 0.97

6 9 1.4e-07 1.2e-05 25.1 3.0 1 23 747 769 747 769 0.98

7 9 2.2e-06 0.0002 21.3 0.7 1 23 775 797 775 797 0.98

8 9 4.8e-05 0.0042 17.1 7.5 1 23 803 825 803 825 0.98

9 9 0.00026 0.023 14.8 1.4 1 21 831 851 831 852 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.4	1.2e+02	3.1	0.4	6	20	370	384	369	386	0.93
2	9	6.2e-07	5.5e-05	23.1	2.6	1	23	633	655	633	655	0.98
3	9	2e-05	0.0018	18.3	2.0	1	23	661	683	661	683	0.98
4	9	1.3e-06	0.00011	22.1	0.3	2	23	692	713	692	713	0.98
5	9	4.1e-05	0.0036	17.3	0.1	3	23	721	741	719	741	0.97
6	9	1.4e-07	1.2e-05	25.1	3.0	1	23	747	769	747	769	0.98
7	9	2.2e-06	0.0002	21.3	0.7	1	23	775	797	775	797	0.98
8	9	4.8e-05	0.0042	17.1	7.5	1	23	803	825	803	825	0.98
9	9	0.00026	0.023	14.8	1.4	1	21	831	851	831	852	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAAGTGATCCGCGTTTCTGGGAGGGCACCGGACGTCGGTGACATCCTGAAGGAGGCGATGCTGTCGCAGAGATTCGCCGATGTGGCCCTGTGCTGTCCGGGAGGCCAGCGATTCCTCGCGCATCGTTTGGTCCTGTCAGCTGCCAGCCCTTACCTTCAGGAAGTGTTGCTGGCGCACAGCAAAGTCACCGCTCACTGCGAGCCGATCACGGTGATCCTGGCCGAAGTGGAGGCGCCGGAACTCGCGGCTCTTCTCGGCTTCGTCTACACCGGAAGTGCCACGGTTCCGCGGATGCGACTGGACGCGTTTCTTCGGGCTGCCGAGGCCCTGCGCATCCGGCTTCCGCCGGTGCCAGTAATGACGACCTGCAGCGAGCAGACAACAGACTGCAAGCTGGAGGACGTCAAGGATGTCAAGGTTAGCCCCAAGTACCTGCAGTGCGACCAGTATCCTTGGTACCGATCGAGAAGACTGTCCTACGAAAACCCGTTCGACAGGAAGGAGTCCTACGTCAGGATATTTTCCACGGACGAAGCTAACAGAAATGTGTTCAGGAACATCGGGGCGCTTCACGAAATCAACAATCCTGGCCCGTCGTTCAATCCAGGTTGTCCGAGCGCGTGGTCAATCGGCGGTTTCTCGCATCAGGATAGAGCAGGTGATCCTTCCGCGGACAAGAATCACGGCTCGATGATACTAGCTGACAAGAACCCGGTGATAGCTCCTAGCAACGACTCGTCCTTCAGCGTGTATCAACGAGGCGCGTGTCTCCCCGGGGGACCGTCCTCGGAAGGATACGCAGCTCCGGATACTTTGGAGCGGGTCAGAACGGGATACGAGAGGCTGCACATGAGCTGCCCAACGGAGAAGCCGATGATGAACGAGGACGTCGTCCTCGCGGGAGGACCGGGAGGACCGGGAGGAGAACCTTGCGGAACGGCGCGGGACGAGTGTCCATACCAAGGCACGATACCGTTGTCGTCCTTGCAGTCCTCCGCtgcctccgccgccgccgctaccgCTACCGCCAGTCAGACGACGAGGTCGTTCGAGATGCTCGATTACGCCTCGCAGACTTCGGCGGGCGAGGATCTCAGCTGCGGCGAAAGTTGCTGTAGGTGGAGAACCGCTCGCAGGCACGTGGCGAATCGCGTCACCGCGTCGCCTTGGCGCCAGATTGTCAGACCTCATCATTCACCAAGGATGCCACGGCCCATCCCGGTGCCTGTCCAGCGTCATGTCGATGACGAAATCCATAAGAAGCCACTGGCTCCGGAGCTGACCCGATCCACGGTAATATCGATGAGCTCGAAGAGTATCGTTCATTCCCCGAGAAGCGCACCGCGAAGCGACGGGCATTGCCCTACAGCTTTCGAAGTTCCTACCAGTTGCGAGACGAGCTTTGACAACGACTCGAGATTATCGCGCGAAATGATCGCTAGTCCAGAAGCGAAAATTCAAGAGATCTATCGATCTCCGGTTCCATTCGCGCCTTCCGATCAGATCGTCCCGCCCACGAACGCGATCAGAAGCAGCGAACAACCTCTCTTTCCGAACGTCAATGGTAACGGATCCACGCAATCGTCCTCGAGCAACGAAAGCGTTATCACGAATGCCGGCAAAAGCGGCGGATATCCGACGCAAGTGGTTCCGCCGGCACCGACGAAACCCGAACTATCGCATCCGATCAGCAGACTCTGCGACACGGTCGAGATCGACGAGAGGAAGGAGACGCCGAAGACGGAGATAGCGAGCGCGGAGAAAGCGAGCGCGGAGAAGAGCGAGGAAGAGCGGGTCGCGAGGATTTTTGTTAACAGCgacaacaacaataacaacgAGACGATCGTGAGCACTGAGGTGGCGCAGCGCGGACGAACGGTGGAAGACCACAAGTGCGATCAGTGCGGAAAGACTTTCGTCACGAGAGCGTCGCTCAAGGTGCACAGCCGAACGCACTCCGGTGAAAAGCCGTTCCGCTGCGCCGACTGCGGCAAGCAGTTTTCGCAGCTGCGCAATTACAAGTACCATCGCAGCGTGCACGAGGGCACGCGGGAGTTCGCCGCCACTTGTCCGGAATGCGGCAAGTACTTCAACGACCGCGGCTACCTGAGCTCGCACATGAAGATTCATCGGAACCGCAAAGAGTACGGCTGCGCGGAATGCGGGAAGAGCTTCAATCAGCGAGTGGCCTACAACATGCACGTGCGCATACACACGGGCGTAAAGCCGCACCAGTGCGATCAGTGCGGAAAGGCGTTCTCGCGGAAGATGCTGCTCAAGCAGCACCTGAGGACCCATTCCGGCGAACGGCCGTACCAGTGTCAGGTCTGCCAGAAAGCGTTCGCCGACCGTTCCAACATGACCCTACACACTAGACTACACTCCGGCCTGAAACCCTACCAATGCACCCTGTGCTCGAAGGCTTTCACCAAGAAGCATCACCTCAAGACTCACCTCAACTATCACACCGGTACCAAGCCGTACTCCTGCACTAATTGCGGCGGCAGGTTCTCGCAGAGCAGCAACATGAGAACCCACTTCAAAAAGTGCATCGTCAACAACACCGCGGGAATGACGGTCAAGTCCGGTGATGAAGCTAGCACCGATCGCATCGACGCCGACAGCGGTATGGCGCCGCAGGTGGCCCTCACTCCGCCCAATTCTGATCAGGAGTCCAGTATTCTGACACCGATTTCGAAGAAAGCTGTCGCGATAGAGAGCAACACATAG
Protein Sequence: MMGEVIRVSGRAPDVGDILKEAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSKVTAHCEPITVILAEVEAPELAALLGFVYTGSATVPRMRLDAFLRAAEALRIRLPPVPVMTTCSEQTTDCKLEDVKDVKVSPKYLQCDQYPWYRSRRLSYENPFDRKESYVRIFSTDEANRNVFRNIGALHEINNPGPSFNPGCPSAWSIGGFSHQDRAGDPSADKNHGSMILADKNPVIAPSNDSSFSVYQRGACLPGGPSSEGYAAPDTLERVRTGYERLHMSCPTEKPMMNEDVVLAGGPGGPGGEPCGTARDECPYQGTIPLSSLQSSAASAAAATATASQTTRSFEMLDYASQTSAGEDLSCGESCCRWRTARRHVANRVTASPWRQIVRPHHSPRMPRPIPVPVQRHVDDEIHKKPLAPELTRSTVISMSSKSIVHSPRSAPRSDGHCPTAFEVPTSCETSFDNDSRLSREMIASPEAKIQEIYRSPVPFAPSDQIVPPTNAIRSSEQPLFPNVNGNGSTQSSSSNESVITNAGKSGGYPTQVVPPAPTKPELSHPISRLCDTVEIDERKETPKTEIASAEKASAEKSEEERVARIFVNSDNNNNNETIVSTEVAQRGRTVEDHKCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCDQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCTNCGGRFSQSSNMRTHFKKCIVNNTAGMTVKSGDEASTDRIDADSGMAPQVALTPPNSDQESSILTPISKKAVAIESNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523510;
90% Identity: iTF_01355554;
80% Identity: iTF_01355554;