Basic Information

Insect: Solenopsis invicta
Gene Symbol: -
Assembly: GCA_016802725.1
Location: NC:19889529-19901999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6e-05 0.0053 16.8 0.3 2 23 714 735 713 735 0.97

2 17 0.51 45 4.5 2.8 1 19 741 759 741 760 0.91

3 17 0.61 54 4.2 0.5 2 23 768 789 767 789 0.95

4 17 5e-05 0.0044 17.1 1.4 3 23 798 819 797 819 0.98

5 17 0.0018 0.16 12.2 2.0 1 23 826 849 826 849 0.95

6 17 6.3e-05 0.0056 16.8 0.7 1 23 855 878 855 878 0.94

7 17 4.5 4e+02 1.5 1.8 3 23 887 906 886 906 0.83

8 17 2.2e-07 1.9e-05 24.5 2.2 2 23 912 933 911 933 0.97

9 17 1.5e-06 0.00013 21.9 0.2 1 23 939 961 939 961 0.99

10 17 0.00042 0.037 14.2 2.6 2 23 973 995 972 995 0.95

11 17 0.0053 0.46 10.7 2.5 1 23 1001 1024 1001 1024 0.96

12 17 0.019 1.7 9.0 2.8 2 23 1040 1062 1039 1062 0.94

13 17 0.00047 0.041 14.0 0.5 2 23 1069 1091 1068 1091 0.96

14 17 3.8e-05 0.0033 17.4 1.0 3 23 1100 1120 1098 1120 0.96

15 17 0.0016 0.14 12.4 2.6 1 23 1126 1149 1126 1149 0.96

16 17 0.22 19 5.6 3.2 2 23 1156 1177 1155 1177 0.96

17 17 0.0063 0.56 10.5 2.6 1 23 1183 1205 1183 1205 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6e-05	0.0053	16.8	0.3	2	23	714	735	713	735	0.97
2	17	0.51	45	4.5	2.8	1	19	741	759	741	760	0.91
3	17	0.61	54	4.2	0.5	2	23	768	789	767	789	0.95
4	17	5e-05	0.0044	17.1	1.4	3	23	798	819	797	819	0.98
5	17	0.0018	0.16	12.2	2.0	1	23	826	849	826	849	0.95
6	17	6.3e-05	0.0056	16.8	0.7	1	23	855	878	855	878	0.94
7	17	4.5	4e+02	1.5	1.8	3	23	887	906	886	906	0.83
8	17	2.2e-07	1.9e-05	24.5	2.2	2	23	912	933	911	933	0.97
9	17	1.5e-06	0.00013	21.9	0.2	1	23	939	961	939	961	0.99
10	17	0.00042	0.037	14.2	2.6	2	23	973	995	972	995	0.95
11	17	0.0053	0.46	10.7	2.5	1	23	1001	1024	1001	1024	0.96
12	17	0.019	1.7	9.0	2.8	2	23	1040	1062	1039	1062	0.94
13	17	0.00047	0.041	14.0	0.5	2	23	1069	1091	1068	1091	0.96
14	17	3.8e-05	0.0033	17.4	1.0	3	23	1100	1120	1098	1120	0.96
15	17	0.0016	0.14	12.4	2.6	1	23	1126	1149	1126	1149	0.96
16	17	0.22	19	5.6	3.2	2	23	1156	1177	1155	1177	0.96
17	17	0.0063	0.56	10.5	2.6	1	23	1183	1205	1183	1205	0.98

Sequence Information

Coding Sequence: ATGTTGCCACATGTTACAGAACAAGTACAAGCGATTCTAaagaacaagaagaaaaagaacaaGATGTCGAATCCTGAGACCAGCAAGCGCGATCACAATTACAGTGAATCGAAACCTGAACATGCCAACAATGGTACCAGTAATGCTGCTAAGGTATCCAAAACAGGATCTGTCGTAGGTCAAATTCGAGATATCGACGAGCTGAAAAAGATTGCACCACGCGTCCGTCTACCAGATACCGAGAGCTTGAACGAGTTAACAAGGATTTCATCCCTGAGTAACAAGTCGCAGAAGAGCGATGCATCCGTTCTGGAAAGAACGCGGCAAGAACTGAGAAAATACTGTCGCACCTGTGCTGGCTTAAAATTGCCCTTGGTGGATATATTTAGTGAGAAGGGCATCAAATTGCGATTGAGTCAGCAAATTAAGCATCTCGAAGTGAATCCTTACGATAGTCTCTCCACACAGATGTGCATGGATTGTATCTGCGACCTTAGAatgagttataaattttttatgcagaTAAAAAAAGCTGAGGTAAAACTCAAATCTATCCATGTTAATCTCACGACTGATAATGCCACGAAGATGGTAACGTTGACCGACAAGCCAATTTTAACAACAAATGAGAAAAAGCATCCATCTTATTCAgAAACAAAGCAGGAATTCCAATTATTCCCCCCAATCCAACAAAATCTATCTTTATCGTCTACGAAGCATGAAAACCAAACGACTGAAGATCAAGCAAACGACTCTGTCCCCAAAATCTGTGCTATCTTTTCCTTGAAAAACGAATCAAAGGTGAATTCTgaaaaggagaaggagaagaggaagaaagaagaagaagaagaagaaggggaggaagtggaggaggaagaggaggaggaacaAGTGATACAGATAGGAGGAGGGATATTCGAGGAAGTGGCAGAGGGAGAGGATGAAGAATCTATCGAGGAATTTGATCCCGAAGATCCTGCGCTGTTGGAAGAAGACGATGAAAAAGAAGAAGTACCGTCAAGATCACCCGCAACCGTCTACAAGTATGATATGGCGGCAAAATCTTACGTGAAGGTGGAAGGAAGTGAGGAGGGAGTTTCCATGAAATCTGAACTCTCTCAGACTTCAGAGGGCGAAGGAGAAAATCCAAGAGAGGGAATGAGGCAGCCaaacattttgaaaagaaaactgGTAATGCCAACGATAACGACGAAGAACGAAGGAGAGGATGATGTACAAAACGTAGTAAAGGAGCACAAGGTGCAAAAGTTGGATACAAACAATCTCTTGAATAATCCTCCCGAAGAGGATGGAATTATGTACGTAACTGTGAAAGGATCCAAGCCTAATGAGATTCTTCTGGTAAAGGTCAAGAAAATGGACAAACCCGTGGAAGCCAAGCGTGCGATAACTTCCACTGATTTCAAGCCTGTTGAACGTTTTCTCAAACGTTACGAAACGCTTACATCGAAGGATTTCTCATCTCGACGTTCCGATGCTCGCGAGCAAATAATTGAGGAACAAATcgaagaatataaaaagaagCGAGAAAAAGTGCTTGGTCAGAAGCGAGAAAAAGATCTTGGAGGTCAGTCGGTAATAACGTTCACCGTGAATGAAATGCAAAAGGAAGTAAAAGTAGAAGACATTTCTGCCAAGGTAAACTTGAGTGCCGACTCGAAGGCAGAAGAAGAAACGACAGTTTTGAAGGAAGAGGATGAAGAGAGAGAAGTggagaagaaggaagagaagatgAAAGAAGAGGATGAAAGAATTGACGAAGGTGAAGAAAAAGTCAATGATAACACGGAGGAATATCTCTCAAAGTTATCAAGATTAAAACTAAAGTCGGAAGAGACGAAGCGGAAAAGGGAAAGTTTGCAGAAGAAACCGGACGAATCATACAACGACGAGAATTTGGAGAAATTAGTAAAAGTTTTGGGGGAAAAGGAAAAGATGCAGGAATTTCAAGAATACTTGAAGCAGCGTAAAATCGTTCTTACTCGTCTCAAGGACGAGGACATAATCTCTCTCTACGAAGATCGTTTCTCCACCACTTTAAAATCGCTCCCTAAATTGTTGCCAGACCTTATCGACACTCAACCTCCTATCGATCCTCTTTCCGAAGAGCGCTATTTGGAATGCGATTACTGTACCGAAACTTTCTCCAACCGCGATGTCCTCGAGGAACATCTCAAGTCCCACGACTACCGTATCCTTCATTGTTGCGACGACTGCGGAGAAGAATTTCAAACCAATAAGGCGAAAAGAAATCATAACGTAATTTGCGAGAGAAAATTGATTTGCAAATATTGCGACATAATTCTGGATTCGAGAGGAAAAAAACGTCAACACGAGCAGAAACACGTCGATGCCCTTTACGGTCAACTTTGCGACATTTGTGGAGAAAGATTCAAACACCAAGGAACTCTGGATCAACATTTGAAAACGCAACACACAAGTTTAGAGAAGATTTATCAGTGTCCAAAGTGTCcaaaaaaatttgctttcaaacaaaaattgagTTTTCATTTAAAATCTGTTCATACGACTCTAAGAGCATATCTTTGCGAGGATTGTGGTGCGGATTTTAAAAATCCTGCAAGCTTGAGACATCATAGAATTAGAAAGCATCAACCGGTTGGAAATAAAAGGGAATGTCAAGTTTGCAGGAAATTGGTACCATTTTACAGTTTATCGAAACACATGCACACGCATAAAGCTTACAGTATCCAGTGTCCACATTGCGACAAAATGTTCAAAAACAGCTCGACCTTGAAGCAACACGTGAAAATTCACGAGGATCAAAGGCAATATCGTTGCGATACCTGTGGCGTTGGATTTAATCGAAGGGATGGTTTGAGGTTGCATATGAGGGTGCACGAGAAAACTGGTAGTAGAGGCTTGAAAGAATGTTCCTGTCAAGTTTGCGGGGAAAAGTTTCCGAATCATTCGACTTTGGTGATTCACAGAAACAGAGAGCACAAGGATGGAAGGCAGTATACGTGTCACATTTGTAACAGATCAATGATTTCGACGAGATCGCTCGAGTGGCACATGTCGCATATTCACAACGAATTGATGCCAGGTGTTACTCGGGACGAAAAAAAGCGTGTTTCCTGCTATCATTGCAACAAGACTTTCAAAACGGAACTGATTCTTCGTACgcatataaaaaatacacacaTGGAGAAGGATCCGTTAAAGTGCACCGACTGCGAGGCTATCTTCACATCCGAAGTACGTCTGCGTCATCACATGATGGTTGTGCACAATCGTCTCGAGGGTACTTTGGCATGCCCTCACTGTCCGAAACGATTCGTTAATCAATTACGGCTAAAGACTCACATGATCTCTCATTCCGAGGAAAGGCCGTATACCTGCGAGATTTGTGGTTTCAACCTCAAGACGAAGATCCAGTTGCTTAAGCATCATCAAAACCGACACAGCGACGAGAGACCTTTACAGTGCAGaTATTGTCCTTGGCGATGTAAGCAAGTGAGTGCCCTCGTTTGCCATGAGCGTACGCATACCAATGAACGTCCATATTCGTGTAGTGTGTGCCGGCAACGCTTCAAATATCTCGGCGACAAAAACAAGCACGAACGTCGTCACGAGAGTCTCGGTGGTTCAGGCTTCAAACGTATCGTGCCTGGGAGAAATGTCAAATCAAAGCGCCAAACCGGGGATACCTCCGGATCTGAGCACGAGCAGAAGGATTCGACGAGTCGACAGGACATGCAACTTATCGAAGAACAATACGAGGAACAGCAGGAAGGTCAATACGATGAGAAATTTTCAGAAGAACAGATAGTTAAATTCGAACAGGTCAAGTTTGAAGCTCAAGAGGAATACGGAGAAGTGTACGAACAGgaGTATGAAGAAAGTTCGAGAGAAGCATCGGAAGCCACCGAGGTAATTATGAACATGGAGGATTCCAACGTGTACACGGAGGAGGTTACGGCCGATAATATCGAGTCTGGTGCGGAAATCATAACGGATGAAATAATGACGAATGACATTTTGCAATCCGGCGCTACTGTCATGCAGTTGCAACGCAAGAATTCAGGGGAGATTCAAGTGATACCAGTGGTGTTATCACTACCCGATTTGACCGACACAAACGAAGTTAATCTAGCGACTGCGTcaataatgtacaataattag
Protein Sequence: MLPHVTEQVQAILKNKKKKNKMSNPETSKRDHNYSESKPEHANNGTSNAAKVSKTGSVVGQIRDIDELKKIAPRVRLPDTESLNELTRISSLSNKSQKSDASVLERTRQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLRMSYKFFMQIKKAEVKLKSIHVNLTTDNATKMVTLTDKPILTTNEKKHPSYSETKQEFQLFPPIQQNLSLSSTKHENQTTEDQANDSVPKICAIFSLKNESKVNSEKEKEKRKKEEEEEEGEEVEEEEEEEQVIQIGGGIFEEVAEGEDEESIEEFDPEDPALLEEDDEKEEVPSRSPATVYKYDMAAKSYVKVEGSEEGVSMKSELSQTSEGEGENPREGMRQPNILKRKLVMPTITTKNEGEDDVQNVVKEHKVQKLDTNNLLNNPPEEDGIMYVTVKGSKPNEILLVKVKKMDKPVEAKRAITSTDFKPVERFLKRYETLTSKDFSSRRSDAREQIIEEQIEEYKKKREKVLGQKREKDLGGQSVITFTVNEMQKEVKVEDISAKVNLSADSKAEEETTVLKEEDEEREVEKKEEKMKEEDERIDEGEEKVNDNTEEYLSKLSRLKLKSEETKRKRESLQKKPDESYNDENLEKLVKVLGEKEKMQEFQEYLKQRKIVLTRLKDEDIISLYEDRFSTTLKSLPKLLPDLIDTQPPIDPLSEERYLECDYCTETFSNRDVLEEHLKSHDYRILHCCDDCGEEFQTNKAKRNHNVICERKLICKYCDIILDSRGKKRQHEQKHVDALYGQLCDICGERFKHQGTLDQHLKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVKIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNREHKDGRQYTCHICNRSMISTRSLEWHMSHIHNELMPGVTRDEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCEAIFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLLKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKSKRQTGDTSGSEHEQKDSTSRQDMQLIEEQYEEQQEGQYDEKFSEEQIVKFEQVKFEAQEEYGEVYEQEYEESSREASEATEVIMNMEDSNVYTEEVTADNIESGAEIITDEIMTNDILQSGATVMQLQRKNSGEIQVIPVVLSLPDLTDTNEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01354796; iTF_01016026;
90% Identity: iTF_01354796;
80% Identity: -