Sinv001451.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- bab2
- Assembly
- GCA_016802725.1
- Location
- NC:5575101-5584639[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-13 1.6e-10 40.2 0.0 1 45 360 404 360 404 0.96
Sequence Information
- Coding Sequence
- ATGGACACCATGTCTACCTCTCAACAGTACTGCCTCCGATGGAACAATCATCGCTCGAACCTGCTCAACGTTTTCGACGAGCTGCTTCACAACGAGTCCTTCACCGACGTCACCCTCGCCGTCGACTGCGGTCGGACGGTTCAGTGCCATAAGATCGTGCTAGCCGCATGCTCAACGTACTTCCAAACTCTATTTCACGACGTGCCGAACCAGTATCCGATAATCGTCCTGAAGGATGTCAAGTATTCCGAGATCAAGGCGATACTGGAGTACATGTATCGCGGTGAGGTGAACGTGGCGCAGGACCAACTACCCGGTCTGCTCAAGGTCGCGCAAGTGCTGAAGGTGAAGGGTCTGGTGGAGGAACACAGCAACCGTACTACGGCGCGCGACCTTCGCCGCGAGGATGCGATAGACACGTCGATGTCGCCGCCACCGGCTATCAGCACTAGCACCGGTGGTGGCGGCGCCAGTCACATGTCACCGCCACACTCCACCTGTGATTACTCCTCCCTTTATGGCAAATCCGGAGGAGTCTCGCTCGATCGCAGTCACCCGTTGACTAACTCATTACCAATCACGTGGCCTCTGTTGCACGCTGGCGCGGGCCATCAGCTTCCGACGTCGATGTCTTCCTCTGCTCTCGTTGGTAGCGGCGGAGGCAGCGGcagcagcggcggtggcggatCCTACGACAACGGTATCGAGACCTCGCCGTTCAAGCGCCGGAAGCTGTTACCACCGTCGCCTCTGCTGATGAACACCGACACGCCGATACTGCGCACGGTACTCGGTCAGTCCCATGTCGACAGCTCGCAGCCTATGTCGCTGCTGCAACCGGACAGCCACGAGCCGGTGCACTACCGCAACGCGAGCAGCAACGGATCCACGAACGACACCGAGAACCGCCGCAACAACGATCTGGCCCACGGCGAAAGCGCCCACGCCGACGTCTCCTACATGGACGAGGACGACAGACAGACGTCGCCGCAATCGTACGGCGGAGATACTGTTCGAAATTCAGCTGCCGCGGACTGCGTCCAGCCGAAGCCCGAGTGGAAACGCTACAAGCAGTACACCCGCGACGACATCACCGGGGCGATCGAGGCAGTGAGGGGTGGAATGAGCGCCGTCGCAGCGGCGCGAAAATTTGGCGTGCCGTCGCGTACGCTTTACGACAAGGTGAAGAAGCTCGGGATCCCGACGTCGCGGCCGTTCAAGCGGTCGACGAGCAGCAACGGAGGAAGCGGGGCCTGCTTCCCGTTCGGCATCGGCGCCAACGTGAACGGCGCTCTTTACGACGGCAACAGCGGCGGCACTAATCCCGAGATCGAGAACGAGGGTGGCGGCAGCGCTAACGTCAGCCTCGAGAGTCTGGCCGGTACGAGTAACGCGGCCTTCGAGGCCGCTTACGCGAGGGGGGTGAAGGACACGTCGCAGGACCGTGACGTAATATCGGACTCGATGGCCCGTTGCAGCTCGAGTCCTGTGATACGCTGCGCTAAGCAGaggcagcaacagcagcagcagcagcaggaccTGGCTGATCAGGTGGAGGATCTATCGGTGAGTCGCAAGTCCGACGTTCCGGTGATAGTGTCGCCGACCGCCACGTCGGCCACCGTGATTAAAGACGAGCTGCAGGAAACGGAGCTGGATAGCAAGGATTACAGCTAA
- Protein Sequence
- MDTMSTSQQYCLRWNNHRSNLLNVFDELLHNESFTDVTLAVDCGRTVQCHKIVLAACSTYFQTLFHDVPNQYPIIVLKDVKYSEIKAILEYMYRGEVNVAQDQLPGLLKVAQVLKVKGLVEEHSNRTTARDLRREDAIDTSMSPPPAISTSTGGGGASHMSPPHSTCDYSSLYGKSGGVSLDRSHPLTNSLPITWPLLHAGAGHQLPTSMSSSALVGSGGGSGSSGGGGSYDNGIETSPFKRRKLLPPSPLLMNTDTPILRTVLGQSHVDSSQPMSLLQPDSHEPVHYRNASSNGSTNDTENRRNNDLAHGESAHADVSYMDEDDRQTSPQSYGGDTVRNSAAADCVQPKPEWKRYKQYTRDDITGAIEAVRGGMSAVAAARKFGVPSRTLYDKVKKLGIPTSRPFKRSTSSNGGSGACFPFGIGANVNGALYDGNSGGTNPEIENEGGGSANVSLESLAGTSNAAFEAAYARGVKDTSQDRDVISDSMARCSSSPVIRCAKQRQQQQQQQQDLADQVEDLSVSRKSDVPVIVSPTATSATVIKDELQETELDSKDYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01355531;
- 90% Identity
- iTF_01355531;
- 80% Identity
- iTF_01355531;