Sinv008809.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- JARID2_1
- Assembly
- GCA_016802725.1
- Location
- NC:1166575-1190748[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 5.7e+03 -2.6 0.2 56 82 150 178 130 181 0.55 2 2 4.9e-23 9.9e-20 70.4 0.0 6 89 1351 1432 1347 1432 0.94
Sequence Information
- Coding Sequence
- ATGGTGTTGAGTCGTAACGataagagaaagaggaaggaagGAGATTTGGTAGATCTCATGGAGCCACTTGCAGAATCTCCGAAAAGGACCAAAGTTCATGCACAAAGGAAATTTGCGCAGGGTGCGACCACAGTGTTCAATACATCGCCTACGCCTGTCAAGGATAAGGAAAAAGCTAAACCTGCCACGATTACAGAATTGATAACGCACAAACGTCCAAATACTGAAgactttttaacatttttgtgcTTCAGAggAACATCTATTTTACCACCTagtttaaatttcttcaatattggcaataaaaaggaaaaagagagtCCTCGGAAGCCAGCTCGAATTTCTACAGAAAAAACGTCGTCTACTAATACAGTCCCAGTGATTCAGAAGCAAGAAAATACATGCCAAAAAAATGTGACTAAAGTAAAACCTATTGTTTCGAATAAGAAAAAGGTGGTTAGTACATTACACAAAAACATTACCAAGCTTAAAACGACTACATCCACGGTTCAAGCACTTAAAAAGAAGTACCAGGAACAACGCCTCGCTAAGcaaagaatcaaaaataagtttaaaaccACTTGTGTTATGAGGACAAGGTCATGTACAGAAAGATCTATGTTAAAGATTGGTCTTCAACTAGCGCCGCGAAAATTTTTACCTAGAATCAAGACGAAAAGACATGGCCTGAGAAGCGGTGTACTGCCAGATAAAACTAACAAACCTTTATCTAAAACAAAAGTCATGTTACCTAAACCAAAAAAGAAAGTTAGTCAAAAGCCGAAAAATAGCGATATATCGAATACAGATGCATCATTCGAAGAAGATAATGATATCGAAGATGATGAAGAGTCACATGTGGAGAAATCAACATCACAGATAAAGCGCAACATACAAAGAGGCattcaaaaaaagatttgtaCCAGAAGTAAGTCAGAAATGAGGAGAGTTACAAGATCATCTAGCAGCACAGTCTCCTCACAAAATCTTTCTAGAAGGCCAACCAGAAAAACAAAAGAAGCAGCTGCTGTATATATGGAAATTCTTGGAAGAAAATTAGTGAGCCCGGATTTAGAAAATGACGATAACGTTTCGGTTGAAAGCTTTCCTGAACTACCAAACGCTCGCAGAATAGCGCAAACGGAGAACGAGCTGAAAGCTAAAGTGAAACAGAATACTAGTAAAACTGTCCCGAAAATTAAGGATTGTAAAGTTAGctctttcaataataataataataagcgaTTAGATAAAAGCAAAAACAATAAGCTAATTTTGAAGAGTAAACGTTTGATGAGgttgcagaaatattgtgaagAAGAGAGCAATGAAGAATCCGAGAATTCAGAAGAAACGAACAATACAAGACCCATTACTAGACAGAGTCGTGGAAAGATTGATAAACCAATTAGTAGGAGCCTTAGATCATCCTCTAAAAATACAACTATACAAGCAGAAGTACAAACTAATGTAAATAGCAAACCGAAGGGTCAAATTCAAACTTATGTGAAATCAGCTAGGgaaaaattcgtaataaaacgTAAACGTCAGCAAAATATATCTAAAACTTTGTCAGATAAAACTAAGCAAAAGAGTCTTCGAAGTAATCAAAATGAGAAAACAGAATCCGAAGAGGAAACATTGGGAATGTTACTTagtaaaataaagagaaaaaaagaaaatgttgagAAAGAAGAGCATGTTCCTGACAATACGAAAAACGTAAAAATAGCTCGCGGGAACTCGCAAAATGTAAAAACAGATTTGTCGAAGGTATCGGATGACGAGGAATCTTTTCGTGGATTTACTAAAAAGGCGATATCAAAAGTTTTGAATTCGTGTCAGACACACGCCAATGTTAATCTGCTAGTCACAGAGTCTAATGAAAAGTTGAATTTGCCTAAAGCATTGGACGTATCACAAACAATAGATCAAAACGTCACTTCACAGGAATGTAAAATAGAAACATCACCGATGATAGCTGATTCCTTTGCAAATTCATTAAATAGTGAGCGCAGCGTATCTATGCAAGATAAAAAATCGATATTAGATTTGTCTATTAAGACACAAAGTTCGTTACCACCTGTGGAACAAACAAGCAAAAAATGTAATCATGAAAATGAGGTTTCTTCCAATCTTATGCCATTATCTACTTTGCATACGAGAAAAGAACGAGTGAATATGTCGACTGAACAGATAGAAAAGTGGTTGAACGAAAGCTCACTTGCTAAGGAAGAGAGCAAGCTAGAAATGGAAAACGTTTCTAGCTTTAGGTATGATTCGGCAGAAAAGTTGAAGACAGACATCTCGCATCTTTCTATTTCGACAAAAATTCAGCATTTAGTACGTCCAGTCAACGTCACACTTTCGAAATTATCGGATAAGATGAATTTAAAAGATCGTGTGGGGATGCACAACAGAAATGCGATATCATCTGATGTGCACAATACCGCAGTGAAACAACAGAATGCAATTATCGACAAATATAAAAGCACTGCCGAGgcagaaattgttaaaaataaaactgagaaGACGAACAAAGATACTTGTTTAGCTGAAGATACTAGCGATACTGTATCTAAATCGGATCAGAACTCTATAGATGGTTCTATAGAGAAGAAATCACCGACcgagaagaaaatatttcaaccGCGGAAACCCTTTTTACCTAAAGTTAAAGAACGTAAAATTGTAACACCAAATGCGAACGCATTTTCGCCGGAAAACGAAAGCAGCGTTTACGCATTTGAAAGTGATACCGAGGTTCCCGTTAGCACACCCTTCCGGAGAAAGATTAGAGACAATGCGAATCGCTCGACCGCAATAACGCCAACAGCGACTGTGGTATCCGAGACCAAAGTTAATAGCAAAGCGGCTGAAACTAACAATTCAAGTTTGCAAGATGATTCTGAATCATTGAATAGCAAGGAAAAACCGTTGCATGATCTTGCGACACCTGTAAAGAAGGAACAAGAGACGCAAGGACCAATGAATGTAGCAAATACAGCAAGCGTGAATAAGTTTGAGTTACCCAAAAATTTTGCGAGTTTAACCAGTGTCCAGGTGTTACCACTCGACAAGCTCACGACAAGTTGGAGTAACGTAAATTACAGCGCTTCTATAGCGGTACAAGTGAATCTTGACGAGACTACACAAGAACAAGAGAGCGATGCGAGTCAACAGAAGAGCACCGAGATATCTACTCAGACCGAAACAAGTAATGATaacgacgatgacaacgacggACAGCTATTTTACATTCCATTGCAGGCTGTTACGAGAAGCGGTCCGAATCTGGTGCAAGGTCAACAGTTAATACAAGGCGTGGCTGTAAAACTTGGCACAGAAGGGCCAACTGGTCCTAATCAAAGGGTGCTTCTTCGAGCTAAGTTGGTGACTAAGCCACCGCTATCTGTAGCACGTTGTCCACCGATAGGAACGGTACAACCGACTACGCGTATCCCGCCTTCCAATCCTACAATTACGGTGGAGCAACAAGTACCGTCGACGTCAACAACCGCAACTGTATCGACAAGTATAGCAAGTATGCCGAGTGTGGAAATGCAATCGACATCACTACGAACGACTACGAAAAATGAAGTCTCGGTGTCAAGTCCGAATCGTCAGAATGTTAATACAAGCGCGAATAACAATTTAGAGAAGCTCACAAAATCACCCAAGTCATCTAGAGAGAGAAAAACTTCTATAGACTCGGCAAAAAGCGGAAAGAggACACAAATGAAATACAAACAAAAAGGATCAGAGCTAAGCTCTTTAAGCAATAGTACAATTCTTCTAAGCACAAAAACAATGAATAATGAAACTCGCGTGGTCGAGGCGCCAACGTTTCATCCGTCGGAGAAAGATTTTCAAGATCCATTGGAGTATATAGATAAGATAAGACCGATCGCTGAAAAATTTGGAATATGTAGAGTAGTGCCCCCGCCAAATTTTAAGccAGAATGCAAGGTGTCTGATGATATGAGATTTACCGCTTATAATCAATATGTACATCGCATGCTCCATAGATGGGGTCCTAACGTAAAAGAAATGATGGCTATCAAGAAATATTTAGCTACTCAGAGTATTACTTTGACTCAGCCTCCATGgATTGGTGGAATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTAGGTGGATTGAAAGAAGTTATAGAGAAGAAGAAATGGCAGAAAGTCGCGGATGGTATGAAGATACCAAAATCGGCACAAGATCGTGTTACTAAACTAGatgatatttattgtaaatatttactgCCATATGACACATTATCCCCagaGGAACGTGGAAAATTATTTGATCAGGTGGAAACTGAATGGATGAAAAAAGAAAGCAAAGCCTTACAAAGGCAAGAGGGGTTATCTAATGATAACGATGAAGAAGAGGATGAGGACAGTTCTGATGAAATTGAAGAATGCATTGTAAAAgGAAGAAACATGCCGTTGAACGCTTTTTACCGAATTGCCCGCAATACGCAACGTATGTGGTTTGGCGAAAATCAAGGAGGAAATGAAGCAGAAGGTGCTTCCGCCGATGAGGTGGAGAATGCATTTTGGAAACACGTAGCTGAGAGAAAACGTCACGTCTGCGTACATGCAGCAAGTATCGATTCGAGTGGTCGTGGATTTGGATTTTCTGTAGCGAAGAATAGCCCATTTGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATGCTGGATCTGTATTGAGAGCTTTAGGGCCACTAATGGGAGTGACCGTGCCAACATTACACGTGGGTATGCTATTCAGCGCTTGTTGCTGGTATCGCGATCCGCATGGTCTACCCTGGATAGAATATCTGCATACAGGAGCCAAAAAGATTTGGTATGGGATACCCGACGAGTATAATAACAATTTCCGAGAAGCGCTTTTGAAAATGGTACCacgatattgcaaaaataagattatatggTTACCCTCTGATACTGCTATGATCCCGCCGGAATTATTAGTAAGCAACGGCGTGCCATTATGTCAGATCGTGCAAGAACCAGGACAATTTATAATAGTATTTCCAAAAGCGTTCACGTCAAGCATATGTACCGGCTACGTAGTATCAGAAAGTGTTTATTTCGCACAATCATCCTGGTTAGAAACTGCGGAACAAGTATTTAAGgACATACAAGACAGCTGTGAACCTTCCATCTTTTCATTCGAGagattgttgtttaatattattaatgacaCAAGATCTCACGTAGATATATTGAAACAGATATTGCCGAGCGTGATAAAGATTCGTGAAAAGGAATTGGATTATCGTAAACAACTGAAAGATGTCGGTCTTGCTAATAGAGAAAGATTGCCTTTGCCAGATAATGGAAAAGGGAAGAAAGGGAAAAAAGTAAAGGAAGATGATGGCGACTTTGAATGTGAGACATGTAGAGCCAATTTGTTTGTCTCTTTGGTAAACAACTCACAAGATGATAGCGTTTATTGCTTACCGCATGCATTACATTTAATCAGCTGTAAGAAGCAAGTTCTACGACATTGTACTCTGATGTACACGTACGACGAAGACGAACTGGATGAATTGATTCACAAGCTGAAAAATAGAATTGAAgccaaatctaaaaaaattaatcaaataaaacaaaataagcaagaaagataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLAESPKRTKVHAQRKFAQGATTVFNTSPTPVKDKEKAKPATITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIGNKKEKESPRKPARISTEKTSSTNTVPVIQKQENTCQKNVTKVKPIVSNKKKVVSTLHKNITKLKTTTSTVQALKKKYQEQRLAKQRIKNKFKTTCVMRTRSCTERSMLKIGLQLAPRKFLPRIKTKRHGLRSGVLPDKTNKPLSKTKVMLPKPKKKVSQKPKNSDISNTDASFEEDNDIEDDEESHVEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSSSSTVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSVESFPELPNARRIAQTENELKAKVKQNTSKTVPKIKDCKVSSFNNNNNKRLDKSKNNKLILKSKRLMRLQKYCEEESNEESENSEETNNTRPITRQSRGKIDKPISRSLRSSSKNTTIQAEVQTNVNSKPKGQIQTYVKSAREKFVIKRKRQQNISKTLSDKTKQKSLRSNQNEKTESEEETLGMLLSKIKRKKENVEKEEHVPDNTKNVKIARGNSQNVKTDLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESNEKLNLPKALDVSQTIDQNVTSQECKIETSPMIADSFANSLNSERSVSMQDKKSILDLSIKTQSSLPPVEQTSKKCNHENEVSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSSFRYDSAEKLKTDISHLSISTKIQHLVRPVNVTLSKLSDKMNLKDRVGMHNRNAISSDVHNTAVKQQNAIIDKYKSTAEAEIVKNKTEKTNKDTCLAEDTSDTVSKSDQNSIDGSIEKKSPTEKKIFQPRKPFLPKVKERKIVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKIRDNANRSTAITPTATVVSETKVNSKAAETNNSSLQDDSESLNSKEKPLHDLATPVKKEQETQGPMNVANTASVNKFELPKNFASLTSVQVLPLDKLTTSWSNVNYSASIAVQVNLDETTQEQESDASQQKSTEISTQTETSNDNDDDNDGQLFYIPLQAVTRSGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRIPPSNPTITVEQQVPSTSTTATVSTSIASMPSVEMQSTSLRTTTKNEVSVSSPNRQNVNTSANNNLEKLTKSPKSSRERKTSIDSAKSGKRTQMKYKQKGSELSSLSNSTILLSTKTMNNETRVVEAPTFHPSEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDQVETEWMKKESKALQRQEGLSNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQGGNEAEGASADEVENAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEYNNNFREALLKMVPRYCKNKIIWLPSDTAMIPPELLVSNGVPLCQIVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQSSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHVDILKQILPSVIKIREKELDYRKQLKDVGLANRERLPLPDNGKGKKGKKVKEDDGDFECETCRANLFVSLVNNSQDDSVYCLPHALHLISCKKQVLRHCTLMYTYDEDELDELIHKLKNRIEAKSKKINQIKQNKQER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- -
- 80% Identity
- -