Sinv013603.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- XBP1
- Assembly
- GCA_016802725.1
- Location
- NC:5786529-5790719[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-13 3.6e-10 39.4 15.8 2 60 92 150 92 151 0.95 2 3 4.5e-05 0.03 14.0 2.5 32 63 143 174 141 176 0.89 3 3 3.4 2.3e+03 -1.7 0.1 33 49 245 261 243 264 0.82
Sequence Information
- Coding Sequence
- ATGAGCTCCGTGAAGAGCGTCATCATCACCCTGCCTAAGGGAGTGCCCAAGGCGATCCCGCGGAACGAGCCGTCGCGCAGCGCACTGTCCAAGTTCAACTTCACAACGTCAATCCTGGTGGACAAGGCGAGGATGGAGAGCAGGAAGGTCGTCCCCGGTCAGCAGGAGGAGAcgcgcggcgacgacgacgttgacGTCGACGTCGCGACGCTCCTCGAGCCCGTGGACACTCGCGTGCGTGGGAAGAAACGCCGACTGGATCACTTGTCGTGGGAGGAGAAGCTTCAGCGAAAAAAACTGAAGAATCGAGTGGCCGCGCAAACATCGCGAGACCGCAAGAAGGCCAGATTGGACGAGCTCGAGGAGACGGTGAGGACACAGAAGGAGAGGAATGAGTTGCTTACGCAGGAGAGCTCGATGCTGAGGTCGCAGAACGAGCTGCTGACGTCGCAAAACGAATGGCTGCTGAACGAGAACAAGAGGCTCAGGAACGAGAGAGACGCAGTGAGGAACACGCTCACGGATCAGCAACAGCCAATCTGCTCCGCCTGTCGGACCCGTGTCGACGGTGCTGTACCTTCGCTGGGATCTGCAGTATCCCCCAATCCCTCTGCCGCAGGGTGGGACAGCACAGTCGGCATCGCGACCGACGCGGACGTCAGAGGCAACCGTGCTGCTGAACTTTCTGATCTACTTCCTCTTGATGAACTCTTCAGCGCTTTCCAAAGTGACGACGTCGAGCGAATCGAAGAGCTGGCGGAGAGCCTCCTACGAGAAGTTGGCTCAGAAGTTGACACAAATTCTCAAAGATCGCATGATCAAGTGTCCGTCAACGAAGCTCCCGTTAAAAAATCTGACCATCCAGAAACACTGGTGGGGCAGACATCAGAAAATGTGGAAACCAATAGAACCGGTGGAAGCATAGACGACAGCGCGTCCACCTGTATACGAAGTACGTCCAATTGGATGCTCGCGGACTGCGATACAAGAAGCCTGCCGAAGATCAAGACCGAGACCGAAATTAAGGAGGAGTCTGAGACTGCGTCGGATCTTGATACTCTTTACGGTACATACGATGCATCCACCAATTCCATCACAATTGTGTATCCGGGCGAGGAGAGCGACGGCTCCGTCGGTATCCAGGAGTGCGTGCAGGAGGTAGTCAGTACCGATAACAGCGTTGTCAGCCAGGTTGCGAACGACGCTACACATCTCACCGTTCCGTCCGCGGGCATTCATTTGTGCTACCCGATGCATTTTTCACCGGCGTACACCAATTCCATGTCACCCACTATGAGCGACGTAGACAGCTGCAGCGTCCCTTCGACGAAGCAGCTGGATTGTATCAGCTCGTCTGACGGTGGGTACGAGTCTCACGATTCCCCGCAATCACACATGTCGGACGCCTTGTTCGATGTCTGGTCCGAGAGTTTCACCGAGCTGTTTCCCACGTTGGGCTGA
- Protein Sequence
- MSSVKSVIITLPKGVPKAIPRNEPSRSALSKFNFTTSILVDKARMESRKVVPGQQEETRGDDDVDVDVATLLEPVDTRVRGKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKARLDELEETVRTQKERNELLTQESSMLRSQNELLTSQNEWLLNENKRLRNERDAVRNTLTDQQQPICSACRTRVDGAVPSLGSAVSPNPSAAGWDSTVGIATDADVRGNRAAELSDLLPLDELFSAFQSDDVERIEELAESLLREVGSEVDTNSQRSHDQVSVNEAPVKKSDHPETLVGQTSENVETNRTGGSIDDSASTCIRSTSNWMLADCDTRSLPKIKTETEIKEESETASDLDTLYGTYDASTNSITIVYPGEESDGSVGIQECVQEVVSTDNSVVSQVANDATHLTVPSAGIHLCYPMHFSPAYTNSMSPTMSDVDSCSVPSTKQLDCISSSDGGYESHDSPQSHMSDALFDVWSESFTELFPTLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -