Sfug029514.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Solenopsis fugax
Gene Symbol
-
Assembly
GCA_003595255.1
Location
QKQZ01051080.1:10849-14675[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.00033 0.05 14.9 1.2 1 23 673 695 673 695 0.96
2 7 0.00048 0.072 14.4 2.4 1 23 750 772 750 772 0.97
3 7 0.00045 0.068 14.5 0.5 1 23 855 877 855 877 0.98
4 7 0.04 6.1 8.3 0.1 1 23 893 915 893 915 0.96
5 7 0.00025 0.038 15.2 0.2 1 23 945 967 945 967 0.98
6 7 0.036 5.4 8.5 0.1 1 23 986 1008 986 1008 0.97
7 7 3.9e-05 0.0059 17.8 1.2 1 23 1013 1035 1013 1035 0.97

Sequence Information

Coding Sequence
ATGTCGGATAAGCACGAGTTGCCGAACATGGCCGATCGCTGCCGGATTTGCCTGGTCGACCACGGCTGCATGACCAGTTTGCGTAGCGAGCGTCTGGAGGGCAAGCTCAAGGATCTGACCAAATGTACTTGCATCGACGTCAAATACAGGGAGAATCTACCTGGAGTCGTGTGTCATGTATGTCTTTACAAGCTGGATATGTGGAGCGAATTCAAGAAACGATTTGTACGGTCCAACAAGATTCTCTTGGAACAGCTAGAGATATCAGAAGCGTCTGACAACACCATAAGCAGCCTCATTAAGGATTCTTCCAGGAATGAAAGTGGTATGACGAAGGAAGCTGAAAAGAAACGTAAAAGCGGTGAAGATAACATTTCTGATATTGAAAAgAAAAAATCGAGGTTAGAAGGGTCTTCGGAAGTTACGAATACAACTTGCAATACAGATCAACTTATGTTAGACGTAGTAAATCTATCGTCAGATgacaaattaaatacatctacACCAAAGAagaatgcaaaaaatattgaggAATATgcgaataataaaacatactCAGTACCAATGAGGGCTAGATTGTTACCCGCGAGACGCGGCAGAAATATTGAACGAAGGAAAGCATCTACAAAACGTTGggtagagagaaagaaggcGCTTATAGCAGCAACAGGGGAAAACATATCCGATACAGATTCCATAGCTTCCGATGACGTGCAATTGTCGCCCGTGCAGAAGGCTCGTGCAAAGAACAATGCGGACAAAGAGACGGAGAAGCAGAAGAAAATTTCTAGAGtgctaaaaaatttagaaactaATCTCGCGGAAAAGTATATCGCGTTTCGCGACAAAGACACGGATTCCGAAACGCGTAGAACGAGATCAATCAGCAAGGAGTCTTATTCAAGTGCTTCGCAATTGAgcaataagaatttattattgaatccAGTTGGTAAGAAAAACATTGCCAAAAGAATTGGATTCTCTCTAGCCAGCTCGATGGAAAGGGAAAAGTCTTTGTTAATGAATGGTGCAGGGAAATCCAAGATGCAGGATGACAACCAAACTTTTACGCCTCACTCAATGAAATCCGAGCTAATAGTTGGTGACACCACGTATGCCGTAACGTCAACTTTGATGCTCGTGGACCCATCAAATACTATCAAAgaagactttaataatttaacgaaGGAGCCTTTTAAGAATCTTAGCGCTGACGAGAGCAATCAGGAGAAGAATACCGATATCATCGACGCAGTTCAGCTGCGTAGAATAAATCCTGTGACACCCAACACAAACAGTAAGCCTAACGGCAAGTTTGTCGAAAGATGTTTGAATATTGAGGTAGAGGGTAGTGAATTGGAAGTCTTAAAACGTGTACAATACGAACTGGCGAATTTTGTTGAGAGTGAGATGaagcaaaaattattcaagGGCGATGGTACGAAAATTGATAAGAGGGATAGCATCAAATCGAATAGTGTGACCTACCTGCACCAAAAACTCGATCAGAGGTTGAAAGATATAGTAGAAATagctataaagaaaaatattgaagcttCTGTGGAGAATAACACAAGCGGTCAGACATCCATGAGGTTTTCGCCAACGTCAGTGAAATCTGCTATGAATTCACTTAAATATCAACCGAAGGTCTTGATAAAACGTCTAGACATAGCAAAAGAGAGTAagcattataacattaataacgCTCGCATGTTGACTACGCCGAAGCACAAGCTCGCCGGACCATACAGTGTGATCACTCGTCATAAACGTCAGAGTGTACCTCCAGTAAGATTTGGCGATTTCAACACCACTGTATTGGACTCCGATTCCAATTCGTCAGATGAAGATAAGGTTCAGAAGACGCCCAAAGTGACCAACTCGAGAGCACTCGGGAAATCAGCGACGAGACAGTCAACTAACCTTATTAGCAAATCGTCGGAAAAGAAACAAGACGAACAGAAGGCTGATTGTGAAGAGGCAAACAAAATTGAGGATGCTATAACTGAAAATCACATATGTGGGGTATGCGGACGTACGTTCCACTCTCGCAAGGATGTCGAGGTGCACGTTCGCATTCATAAAGTATCGAACACCGCTGTCACGCAGATTGTGCTACAAAACGAGAACACAATCACGCCGCCGAAGACTCGACAGAGCAAGCAGAAGATGATGCGCTGCAAGAGATGTCACGAAATAGTCGAGGCGCGTCTTGTGAAGACACACGTGTGCAAAACACCTCTTCACAAGTGTTACGTTTGCGATTCCATGTTCCGCACGAAAAATCTTCTCGCGAAACACTTGGAGAGCCATGATAATTCCGAATTCAACATAATAAACGCAATCGGGAACAAATTTAACAATGCAGGCGCGAAGGTGAAagttccagcgcagaagaatcaAGCCCAGGAGACTGAAACTGCGACAAAAACCCAGTCTGCAACAAAAACTGTGACAAAAGTTGCAAACGAGAAGAATGACATCCAGTCCGATAAGATAACTAGTACGGGTGTAAAGCTAGATAGCACTgaaaatactgtaaaaaagCCTAAGGAAACGTACACTTGTTTTGTGtgtgataaaattttcactGACGAGGAGATACTGAAGGATCATTTACAGAAGCACTGTGACGATCTGAGCGAAGGGGAACAAAGTAATAACAAGGAGCAGTATCAATGTGCCATTTGCAGCAAAACTCTGGAATCGGATCAAGCATTAGAAGAGCACGTCGGCAAACACCTGTTCGACGATGAGGACGACAATCCTAATCTGATCAGCATAGACCAGGGCAATGAGAACAACAATAAGTCAAAAGAAACTGAGACATATCAATGTGGCCAATGCTCAGAGTCGTTTGAGTCAGAAATGTTGCTGGAAATGCACATGCAGGAACACGAGGAAGAAGTTGCAATAGCAGAATGGGAGAAACAAGGGATGAAGAACTATCAGTATCAATGCATGCTTTGCGAAGAATTGTTCAATTTGGAAGAGGAACTAACGCAACATTTGGATATACATAACGTAAACGAGCATGTATGTCAGTTGTGTGATAAACCATTTTGTACGCTAGAGGATCTACAAGAACACGTCGCGACTCAttga
Protein Sequence
MSDKHELPNMADRCRICLVDHGCMTSLRSERLEGKLKDLTKCTCIDVKYRENLPGVVCHVCLYKLDMWSEFKKRFVRSNKILLEQLEISEASDNTISSLIKDSSRNESGMTKEAEKKRKSGEDNISDIEKKKSRLEGSSEVTNTTCNTDQLMLDVVNLSSDDKLNTSTPKKNAKNIEEYANNKTYSVPMRARLLPARRGRNIERRKASTKRWVERKKALIAATGENISDTDSIASDDVQLSPVQKARAKNNADKETEKQKKISRVLKNLETNLAEKYIAFRDKDTDSETRRTRSISKESYSSASQLSNKNLLLNPVGKKNIAKRIGFSLASSMEREKSLLMNGAGKSKMQDDNQTFTPHSMKSELIVGDTTYAVTSTLMLVDPSNTIKEDFNNLTKEPFKNLSADESNQEKNTDIIDAVQLRRINPVTPNTNSKPNGKFVERCLNIEVEGSELEVLKRVQYELANFVESEMKQKLFKGDGTKIDKRDSIKSNSVTYLHQKLDQRLKDIVEIAIKKNIEASVENNTSGQTSMRFSPTSVKSAMNSLKYQPKVLIKRLDIAKESKHYNINNARMLTTPKHKLAGPYSVITRHKRQSVPPVRFGDFNTTVLDSDSNSSDEDKVQKTPKVTNSRALGKSATRQSTNLISKSSEKKQDEQKADCEEANKIEDAITENHICGVCGRTFHSRKDVEVHVRIHKVSNTAVTQIVLQNENTITPPKTRQSKQKMMRCKRCHEIVEARLVKTHVCKTPLHKCYVCDSMFRTKNLLAKHLESHDNSEFNIINAIGNKFNNAGAKVKVPAQKNQAQETETATKTQSATKTVTKVANEKNDIQSDKITSTGVKLDSTENTVKKPKETYTCFVCDKIFTDEEILKDHLQKHCDDLSEGEQSNNKEQYQCAICSKTLESDQALEEHVGKHLFDDEDDNPNLISIDQGNENNNKSKETETYQCGQCSESFESEMLLEMHMQEHEEEVAIAEWEKQGMKNYQYQCMLCEELFNLEEELTQHLDIHNVNEHVCQLCDKPFCTLEDLQEHVATH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01355699;
90% Identity
-
80% Identity
-