Basic Information

Insect: Solenopsis fugax
Gene Symbol: salm
Assembly: GCA_003595255.1
Location: QKQZ01013747.1:1-14337[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.1e-05 0.0031 18.7 1.0 1 23 336 358 336 358 0.98

2 9 8.6e-06 0.0013 19.9 2.1 1 23 364 386 364 386 0.98

3 9 3.8 5.8e+02 2.1 3.3 3 23 751 771 750 771 0.92

4 9 3.7e-08 5.6e-06 27.3 0.6 1 23 777 799 777 799 0.97

5 9 5.2e-05 0.0078 17.4 2.6 1 23 809 831 809 831 0.98

6 9 0.011 1.6 10.1 3.2 2 23 1124 1145 1123 1145 0.97

7 9 0.027 4 8.9 1.0 1 14 1151 1164 1151 1165 0.92

8 9 5e-07 7.5e-05 23.8 2.1 3 23 1378 1398 1376 1398 0.96

9 9 1.7e-07 2.6e-05 25.2 0.9 1 23 1404 1426 1404 1426 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.1e-05	0.0031	18.7	1.0	1	23	336	358	336	358	0.98
2	9	8.6e-06	0.0013	19.9	2.1	1	23	364	386	364	386	0.98
3	9	3.8	5.8e+02	2.1	3.3	3	23	751	771	750	771	0.92
4	9	3.7e-08	5.6e-06	27.3	0.6	1	23	777	799	777	799	0.97
5	9	5.2e-05	0.0078	17.4	2.6	1	23	809	831	809	831	0.98
6	9	0.011	1.6	10.1	3.2	2	23	1124	1145	1123	1145	0.97
7	9	0.027	4	8.9	1.0	1	14	1151	1164	1151	1165	0.92
8	9	5e-07	7.5e-05	23.8	2.1	3	23	1378	1398	1376	1398	0.96
9	9	1.7e-07	2.6e-05	25.2	0.9	1	23	1404	1426	1404	1426	0.98

Sequence Information

Coding Sequence: GAAGAAAATGACTTTACATCAGATGGTGAAGAGAGCGGTggtggaggaggaggtggCGAGGAAGCCGTGGATCTCACAGCGACGAGATCTCATCAGGGTGATGATGATCCTATGGAAGAGGATGAGGAAGAAGGTATCGATGAGCAAGACGAGCAGGATGAGGACGAGGAGGGTTCGCGCAAACAGATTCATCATCGACAGGACGCGGAGAACAATAATAACTTTGTGGAGAGCGGCCTACCTACTGCTATATTTCCACCTGCTGGAACTAGTCACGTCACCCTTGAAGCCCTTCAGAATACAAAAGTGGCGGTCGCCCAGTTCGCAGCCACTGCCCTCACCGGGGCAGACAGCGAAGCGGCGCTACAAGACCTGGCATTTCTGGAAAACACGCTGTGCACCCTTCAGAATCAACAGGTATTGCAATTACAGCTGATTCGACAACTTCAGCAGCAATTATTGATCACTCACGGGCAATCGGTAATGCAATCGACGGCAACGGAGCCAACCGATAATAAAGAGGCTTCGTCGTCTCCGATTATTCATCCGAAACCATTGTCGAGTCTCGCGTCACCTCCTTCTTCTCGTCCACCGAGTCATCATCAACAAACGTCACCGGCGCCGTTGACGCCGAATCTGCTTCAGGAACGACCAACCTCGACGAGCAGCGCTTCTCCTTTGAATCTACCCCTATCTTCGTCCGGCACGACATCAACTGCCATCACAACCACCAGCAGTCAAATACCGATGCCGCATCAAATGCCGCCGCTTTGCTCGATAAGCGCTTCCCTCGCTTCATCGATCATAACGAACACCGATCCGCCGCCGCTTCACGAGCCAAACACGCTGGACATTCTTCAGAAGCGCACCCAGGAAGTATTGGATAACGCGAGTCAAGGACTAGCCAACAATTTGGCCGACGAGCTCGCGTTTAGAGGCAAGGGCTTGCGACTATCTCCTTACGATTCGAAATCAAGCGGTGGTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGCTTCTGTGGCAAAGTCTTCGGTAGCGACTCGGCGCTACAAATCCACATACGATCCCATACAGGTGAGCGACCCTTTAAGTGCAACGTATGTGGCAGTCGGTTCACGACCAAGGGCAACCTGAAGGTCCACTTCCAAAGGCACACAGCCAAATTTCCACACGTTAAGATGAATCCAAATCCCGTTCCAGAGCATTTAGATAAATACCACCCACCTCTCTTACAGCAAATCGCTTCTGGGCAGAGACCGATGCCGTCTccgccaccgccaccaccaccatcCTCTCATCACCCTTCGTTTCATCCGACAACAACGCACGGTTTCCTCCCGCCACAACCGCCCATACCTCTGAGTCTCACCTTATCCAACATGACGCCCATTTATCGATCTCCAGTTATTAATCACCGGGACGATCAAGATGTGCCGGAGAATCTTAGTAAACCCATAACCACCGCTCCACAGACGTCTCCCACTTCTCCCGCTGCCATATTGAATTCTCGTCATTCCTTTCACGACAATCTCCATCAACAACATCAAAAGCAGCAGCTTGAGCAGAGAGAGGAAATAAAACTCGAACAGAGATCGCCCGGACAGGAACAATACCAACAACGACCGATGAGCCGGGAAGGCGCCGAGCGAATAACACCAAAAAGAGAACCCGAGGAGACGGAAGAAGTCATTGAGGAAGAAAGCGATGATTTTGAAGAGACCACGAGACGATATCTCAATTCACCCCAATCCGTGAATCCACCGTCCCAGCCGCAAACGTACGAGGATTGTAGTATGGACAGCAAGATCAGTGGACGTTTAGAGGGCGACGGAGAGATGGAAGTGGACGAAGAAACAGAGGAGCAACCTGAAAATCTCTCGGGCAGAGGTACAATCAATCGTTTACCCCAACAGATCGGCGCGTATCCGGGAGCATCGCCGGCTAGCAGTAGTGCAAGTAGCGGTAGTCTACAGACATCTTTCGCCGGAATCTTGTTTCCTGGTCCCCCAACTCATCACCAAATTCCTCACCTTCCTGTTTCTACACAAGCAGGATCAACCATCACAACCGGAAATGAAATGATCGATCCATCCAAAGATCCAGCGATTTATTCGTCCTTACTACCGCGACCTGGCAGCAATGACAATTCTTGGGaaagtttgattgaaataaCGAAAACTTCAGAGACATCCAAGCTGCAACAACTAGTCGACAATATCGAGCACAAACTGAGCGATCCTAATCAGTGCATCGTTTGTCACAGAGTGCTTTCATGCAAGAGCGCGTTGTTGATGCATTATCGCACTCATACTGGCGAGCGTCCTTTCAAGTGTAAAATTTGCGGTCGCGCCTTCACGACAAAGGGCAATCTGAAAACTCACATGGGAGTGCACAGAGCTAAACCACCACTGAGAGTGTTGCATCAGTGTCCCGTATGTCACAAAAAATTCACGAACGCTCTCGTATTACAGCAGCACATACGTCTTCATACCGGGGAACCCACTGATCTCAGCCCGGAACAGATTCAAGCCGCAGAAGTAAATGAGTTCCCGCCCGGTTACCATCCGCTGGCGTCTTTCCTTCCGCAAGGATTTCCATCGATACATCCGACTAGCGCGAGCTTCTCCTTAGGATTCCCTCCATCCAGGCAAACGGCCATCGAGCAACAATCGCAGGAAAGCGATATTGAAACAAAAGAAGAGGCTCAACGACAAAGATTTATGGAGGAGCATAGCGAAGAGATAGAAGATCAGGAGGATGAAGAGCAAGATCATAGAGAGGACGACGAGAGGTGCGAATTAAATCGTGAAAGGCATAGCGTCGATGTCGAAGAAGAACAGGACCATGAAAGCGAAGATACGTCCGAGCACAAGGATATAACGGTTCCTATATTTTCGACTTCGTTGGCGGCTCTCGAAAACCAAGTAAGAACCATCACGACGACGGCCACGACGACAAATGTGGCCAGGTCGCCATCCTTTCATCGGTACAACGGTAGCGAGAAGAGTACTAGCCCACCGACATCCGGAGCCCCGCTCGATCTAACACCACGTGCTTCGTCTACGCCAGCGTCGGTGGCTTCCGCATCGCCAACACCGCCACCTCAGACGGCGCCGCATCATCCACCGAATCCCTTCGGCATGTTCGCGGGACTAATCCAACAAGCGGTTTCGTCTGCTCCTACCACCAGCACGATAGGCACGTCGAACATAAACAGCGTCACCTCGATGAGTGCTATCAACCCGGGTAGCGGTCCCGGCAGCGGACCCTTAGCTTCGCTGACCACTTCAGCCGTACTAGCCGCATCATCGACCTACAATCCGCTCGGCCTAGCTGTCGGAGGCCCAGCAGTACGTGGCAACACCACATGTAAATTCTGCTACAAGACGTTTGCGTGCCAATCTGCATTGGAGATTCATTACCGGAGTCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGATCGAGGTTTTTCTACGAAGAACGATGATACCGGTCAGCAAGTATGTTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATCCTCCCACAACCCAATCCCCAATATCGCTCGTACCCGGCGAGATCGGCCGCCGGAAATAGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAGCGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTTTCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGTTGACTCACAAGATTCGCGATATGCCGCCACATCTATTCAGCGACCCTAAGCATcaacagcaacaacaacagcaacaacaacagcagcagcagcaacaacaacaacaacagcaccaacaacagcaacaacaacaacagcaacagcaacaagATCGAGAGACTTCCCGAAGTCCAATGTGCGTCGATGATTCGAGCCTACCGCCTCCACCACCACCTCCACCACCCCCACCGATGCCACCGACATCCATCGAATCTACGATACCAGTGAAGAGATCACCGGAAGGAGATCTGCCAGCACCGAAAAGACCAGCTAGCCTGCCGAGCAAGCATTTGTGCCAGATTTGCAATAAGAATTTCTCCTCATCTTCGGCGCTCCAGATCCATATGAGAACTCACACTGGCGACAAACCATTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACAAAAGGCAACCTCAAGGTGCATATGGGTACTCACATGTTCACCAACGGAACGTCGCGTCGAGGTCGACGGATGTCGTTGGATATACCTCCTCTACCAATCACGCCCAAGGACTCGGAGTTTCTACAACGGCGACCGGACCTTTTTTACCCGTATCTTCCCGCGCCATTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATTTCGGTGATTCAAAGTAGCAATGGGTTACCGCCCCATTCCTTGAGCGCGGGCAAATACGCGGCAAGCCTGTTTGGCTCGGTGTACGGTGCCAGCGGGGGAGGCTTCTCTCTGGATAAGCAACCGATCGGCCCGACTAGTAATGGACCTTTAGTGGACGCCAAATCCGCGATACCCTCGGGATCTATGCTCTTTCAAACACCGTCACCCTCGCACTCGCCCGGCGCGTCGTCCAATGGCGGTAATCAGACGTCCGCCAGCGTGTCTTGGACCGGCGATACCCTTCAGCATCATTTCGACCGGGAAACACCGAGCAGAACCGAGAATGACGCCACACCGCCCACGGCGCGGCTACCACCGCCACCAGCGAGGGGAGAGGGATTAGCCGCGTGA
Protein Sequence: EENDFTSDGEESGGGGGGGEEAVDLTATRSHQGDDDPMEEDEEEGIDEQDEQDEDEEGSRKQIHHRQDAENNNNFVESGLPTAIFPPAGTSHVTLEALQNTKVAVAQFAATALTGADSEAALQDLAFLENTLCTLQNQQVLQLQLIRQLQQQLLITHGQSVMQSTATEPTDNKEASSSPIIHPKPLSSLASPPSSRPPSHHQQTSPAPLTPNLLQERPTSTSSASPLNLPLSSSGTTSTAITTTSSQIPMPHQMPPLCSISASLASSIITNTDPPPLHEPNTLDILQKRTQEVLDNASQGLANNLADELAFRGKGLRLSPYDSKSSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPPSSHHPSFHPTTTHGFLPPQPPIPLSLTLSNMTPIYRSPVINHRDDQDVPENLSKPITTAPQTSPTSPAAILNSRHSFHDNLHQQHQKQQLEQREEIKLEQRSPGQEQYQQRPMSREGAERITPKREPEETEEVIEEESDDFEETTRRYLNSPQSVNPPSQPQTYEDCSMDSKISGRLEGDGEMEVDEETEEQPENLSGRGTINRLPQQIGAYPGASPASSSASSGSLQTSFAGILFPGPPTHHQIPHLPVSTQAGSTITTGNEMIDPSKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYHPLASFLPQGFPSIHPTSASFSLGFPPSRQTAIEQQSQESDIETKEEAQRQRFMEEHSEEIEDQEDEEQDHREDDERCELNRERHSVDVEEEQDHESEDTSEHKDITVPIFSTSLAALENQVRTITTTATTTNVARSPSFHRYNGSEKSTSPPTSGAPLDLTPRASSTPASVASASPTPPPQTAPHHPPNPFGMFAGLIQQAVSSAPTTSTIGTSNINSVTSMSAINPGSGPGSGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDTGQQVCSCADQPFAAKGPILPQPNPQYRSYPARSAAGNSEKPKRRRRRPEERKNRGRTGTGGGRRLTSVFPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDPKHQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQDRETSRSPMCVDDSSLPPPPPPPPPPPMPPTSIESTIPVKRSPEGDLPAPKRPASLPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDIPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSSNGLPPHSLSAGKYAASLFGSVYGASGGGFSLDKQPIGPTSNGPLVDAKSAIPSGSMLFQTPSPSHSPGASSNGGNQTSASVSWTGDTLQHHFDRETPSRTENDATPPTARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_01421750;
80% Identity: -