Basic Information

Insect: Solenopsis fugax
Gene Symbol: -
Assembly: GCA_003595255.1
Location: QKQZ01005908.1:590-5339[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5e-05 0.0076 17.5 0.6 1 23 146 168 146 168 0.95

2 15 0.0017 0.26 12.6 1.7 3 23 176 196 174 196 0.97

3 15 0.0005 0.075 14.3 0.0 1 23 329 351 329 351 0.98

4 15 0.61 91 4.6 0.1 1 23 357 380 357 380 0.96

5 15 0.001 0.15 13.4 1.9 1 23 410 432 410 432 0.98

6 15 0.052 7.9 8.0 0.0 1 23 447 469 447 469 0.92

7 15 0.44 66 5.1 0.3 2 23 477 499 477 499 0.95

8 15 0.0028 0.43 12.0 2.7 2 19 507 524 507 528 0.95

9 15 0.00019 0.028 15.7 3.5 3 23 536 556 534 556 0.97

10 15 0.014 2 9.8 0.1 3 23 563 583 562 583 0.97

11 15 7.9e-06 0.0012 20.0 0.4 1 23 592 614 592 614 0.98

12 15 0.0034 0.51 11.7 0.2 3 23 622 642 620 642 0.97

13 15 0.003 0.46 11.9 0.2 3 23 650 670 648 671 0.94

14 15 0.002 0.3 12.4 0.0 1 23 685 707 685 707 0.93

15 15 0.011 1.7 10.1 0.0 1 20 1124 1143 1124 1146 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5e-05	0.0076	17.5	0.6	1	23	146	168	146	168	0.95
2	15	0.0017	0.26	12.6	1.7	3	23	176	196	174	196	0.97
3	15	0.0005	0.075	14.3	0.0	1	23	329	351	329	351	0.98
4	15	0.61	91	4.6	0.1	1	23	357	380	357	380	0.96
5	15	0.001	0.15	13.4	1.9	1	23	410	432	410	432	0.98
6	15	0.052	7.9	8.0	0.0	1	23	447	469	447	469	0.92
7	15	0.44	66	5.1	0.3	2	23	477	499	477	499	0.95
8	15	0.0028	0.43	12.0	2.7	2	19	507	524	507	528	0.95
9	15	0.00019	0.028	15.7	3.5	3	23	536	556	534	556	0.97
10	15	0.014	2	9.8	0.1	3	23	563	583	562	583	0.97
11	15	7.9e-06	0.0012	20.0	0.4	1	23	592	614	592	614	0.98
12	15	0.0034	0.51	11.7	0.2	3	23	622	642	620	642	0.97
13	15	0.003	0.46	11.9	0.2	3	23	650	670	648	671	0.94
14	15	0.002	0.3	12.4	0.0	1	23	685	707	685	707	0.93
15	15	0.011	1.7	10.1	0.0	1	20	1124	1143	1124	1146	0.94

Sequence Information

Coding Sequence: ATGGACGTCGCCGGGGATCTAAATCTACAGTGGGTGGGAGATGTGGAGCTGCACGAGGAAGTGATATGCGGTCTGGAGGCGCAGCTAGTCGCATCAGAGGAGGAGGTGATTGGCGCCTGTGAAGAGGTAGCAGTGGAGGAAACTGTTGAGTCCGTTCCCGTGGAGAGCCACGTTCCTGTCACCGAGTCCGAGATACTCATGGTACCTCAGAGCAGTGACATGGAGTCGATCTACATAGTGCCGCAGGATCAGGGGCACGACTATCTGAATATACAAGTCACTGAAGAAGTGATTACTGACAATTGGGACAGACCTGGTCCAGACGATGGGGTCGAGATTCCAGAGGCCAAAGTGACTCATGACAATCTTCTGGAATACGACGATATGGAGATACCATTACCGATTGATCAGGACTCCTATCAAAACGCTCGGCCATATCCATGCGATTTCTGCAGCCGCAGGTTCCGAAAGAAGGCTAATTTGATGAACCACATCGTGGCACATCAGACAGATAGGCCATACGGCTGCAATTTATGTGGGTCTCGCTACGTACGTAAATGTGACTTAAACAATCACCTGAAGGTCCATGCGTACGCACCGTCGTCGCAAGACGGCCTTGAGGACGATTTAAATGACGAGGACTCGCTGGCGGCCGAGGAGGAGGACGTGACGACCAGTGGCAATAAAGGCAGGCGCAAGAAGGTGCAATCGAGCGCGCCACGGAAACGGAAGAACAATACCGCCGCTGGTGTGCCGAAACGCAACATCGAGAGCATCAAGATAGAGATGGGCAAGTATGTGTATAAACCATACAATGATTATATGGACGCGCTAGAATCATTCCACGAGGACGAGCTGACCGACGGTTATTCTGCACGCAGCGGCAATTACGCATCTAGCTCAAGGTGGCAGATGGAGGAGATGTCATCTGTCACGGGCAGAGAGCAGCCGCAACAGTGGCCTGTCACCGATCCTACGAAGCCATATGTCTGCCAATCCTGCGGCATCGGTTTTGCTAGGGAGAAAGCATTGGCATCACATGCGCGTATTCATGGTGGTGATAGTCCTTTCGAATGTACCTCATGTGGAGACATGTTTTGGGATATCAATAGTTTGCGGGATCATGTGCGTATCAAGCATGGTGGTACAATTCCCCAGCAGATATCTGATACAGAGGAGTATGACAATGAGGCCGCTTACACGGGCGGCAATGAGAGGATCGGCGagttttattgtaatacttGCGCGGTACCGTTCCATCGTTTGGATCTACTCAAACGCcatcaaaaAATTCACATAAAACCGGAGATAGACACAATGGAAGGTTCCAGTCAACATCATATGTGCAATGTTTGTGGAGAAGAATTTGAAGAGGCTCTAGCACTATTGGCACACGCGGAACTTCATGCTTCAAGatCTCCTAGTCGTCGTTGTCTACTGTGCGGGGCGAGATGCCGTGACGAAGCAGAAGTCGCGGATCACGTGCGACAGAATCATGCTGAGGATGCGCCGCCAAACACGTGTACAATGTGTGGAAAAACGTGCAAGGACAAGCGCACTTTACTCAAGCATTCTTGGATACATAATGTCGACAAAACCTTTGGTTGTACAAAGTGTGGAAAGCGCTTCCACAGTAAAGCACGATTACGAAGACACATGGTATCGCATCGCAACAAGATGGTAGCTTGCGATGAGTGCGGTGAGGAGTTCCCCGATGGACGAGCTCTTGTGAGCCACCGCCATTCACATAATAGGGAACTGGGCGGCCGTTCTTTTCCATGCCGCGAGTGCGGGAAAACTTTCGGTAGTCGTAGCTCACAGCAGATTCATATACGTATCCACACGGGCGAGAGACCTTACGGTTGCCGATTCTGTTGGAAGGCTTTCGCAGACGGCGGTACTTTGAGAAAACACGAGCGTATCCACACTGGCGAAAAGCCATATGGATGTGCGATCTGTCCTCGGGCATTTAATCAGAGAGTAGTTCTTCGAGAACACGTGCGCGCTCATCATTCAGGTCCTGACCCAAAATGCGTGGGTAGTATAACACCATATTTGTGCAAGGTATGTGGTGAGTCGTACAGCACATCCGAGGCGATAGTGGCGCATATAGTGCAACATTGTGACGACAACACTGCGTTGAGACGTCAACCTCAGACCGGGCCGCGCAAATATAAGAGAAGACGCAAAACAAAGCCTCTTGAGACAAACACAGTGGAACGTAGAAACGAGTTTACGTACGACATGATGGAAAGTAGCGGTGGCGGTGTCACCGGTAGTGGTACTGTCTGTGGCTGCAGCGGTGTCGTCGGTGGTGGCACTGGCACTGGTGGTTCCGATTCGGAAGAAAATACAAAGCGAAAACTAGGCAAGAAGAACAAGCAACATCGATCGAACGTCGAGGAAGGCTATCAAAACGTGCTGAAAAGCTTTGAAAGCTCTATACATAAAATCGAGAACATAAACTCGATCGTAAGCAACTCCAAATTAAACGCATCCAAATCAAAGCTTTCGAAGAAGAAGTTGCGCAAAGAGGAGAAGAAGCAGGAGGCACAGGCATCGAATCAGTCGGGTCGACCGAAGATGATCCACACGCAGAAGACGCGAGTGCCAGTCGAGGTGGGCAGCGATGGCGCGAAAAAAGGTCAAAAGACGAAGACGATGGTGACTCGTACACCAAAGGTGATGCCGAACGAGCACAAGTCCGGCATCTTTCCAGGTGGTGAGCGGAATCGGCCGCGCACAAAGAACGTCAGTTATCACATTGAAGGTAAATCGCAAATCGTGCCAGCGACATTCCCGAAGGAAGATGCGTCTACGATGTCGACGCAGCAGTTATTGGCGAATATCAAGCAAGAGCCAGGCGTGCAAAAGGCCACAGGTAACAGTCACAGAAACAACAATGGTAATATTGTAGATCTTGGCAAAACTCAGGCATCAACAAACAAGAAGAAAGCGTCATCGGCCACCGTGAAGAGAACCAAGAAGCAGAAGCCTGCAGTAGTGAAACAGGAATTGAACGCATCGGTCGAAACAATCGCAGAagaacagcagcagcagcagcagttgcaattacaaaataataacaataacaatactATGGAGAACATCGGCGATCCGATACGACTAATGGAACATGCAGTGGATGGCAGTAATCTGGAAGTAGCTTTCGAAGCGAGTGTTGTTACCGCTCAAGATGACGAGGGTGAAAGCATATTGCCAGACAACGCTATGCAAGAAATGGGCAACGGAGACGTTAAGCTCAGTATCAAGGTGGAGTCGGCACCACAAAGGAGGATGCTCGCCGTACATAGTGTAATCACACCAGTGGACGATGTCCCGGAAACGATAATACCGGACACGGTAGAGTATACGTGCGAGATGTGTGCCGCGGTGTTCTCCAGCCGTGCCGAGTTATTGGTACACGTGCCGATACacatttga
Protein Sequence: MDVAGDLNLQWVGDVELHEEVICGLEAQLVASEEEVIGACEEVAVEETVESVPVESHVPVTESEILMVPQSSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRPGPDDGVEIPEAKVTHDNLLEYDDMEIPLPIDQDSYQNARPYPCDFCSRRFRKKANLMNHIVAHQTDRPYGCNLCGSRYVRKCDLNNHLKVHAYAPSSQDGLEDDLNDEDSLAAEEEDVTTSGNKGRRKKVQSSAPRKRKNNTAAGVPKRNIESIKIEMGKYVYKPYNDYMDALESFHEDELTDGYSARSGNYASSSRWQMEEMSSVTGREQPQQWPVTDPTKPYVCQSCGIGFAREKALASHARIHGGDSPFECTSCGDMFWDINSLRDHVRIKHGGTIPQQISDTEEYDNEAAYTGGNERIGEFYCNTCAVPFHRLDLLKRHQKIHIKPEIDTMEGSSQHHMCNVCGEEFEEALALLAHAELHASRSPSRRCLLCGARCRDEAEVADHVRQNHAEDAPPNTCTMCGKTCKDKRTLLKHSWIHNVDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNRELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCVGSITPYLCKVCGESYSTSEAIVAHIVQHCDDNTALRRQPQTGPRKYKRRRKTKPLETNTVERRNEFTYDMMESSGGGVTGSGTVCGCSGVVGGGTGTGGSDSEENTKRKLGKKNKQHRSNVEEGYQNVLKSFESSIHKIENINSIVSNSKLNASKSKLSKKKLRKEEKKQEAQASNQSGRPKMIHTQKTRVPVEVGSDGAKKGQKTKTMVTRTPKVMPNEHKSGIFPGGERNRPRTKNVSYHIEGKSQIVPATFPKEDASTMSTQQLLANIKQEPGVQKATGNSHRNNNGNIVDLGKTQASTNKKKASSATVKRTKKQKPAVVKQELNASVETIAEEQQQQQQLQLQNNNNNNTMENIGDPIRLMEHAVDGSNLEVAFEASVVTAQDDEGESILPDNAMQEMGNGDVKLSIKVESAPQRRMLAVHSVITPVDDVPETIIPDTVEYTCEMCAAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730239;
90% Identity: iTF_01355623;
80% Identity: -