Sfug001546.1
Basic Information
- Insect
- Solenopsis fugax
- Gene Symbol
- retn
- Assembly
- GCA_003595255.1
- Location
- QKQZ01054317.1:26068-30505[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-15 1.6e-11 45.3 0.0 17 79 55 115 45 116 0.91
Sequence Information
- Coding Sequence
- ATGTCAATTACCCCCACTACACCTTTGCCAGGAGGATTATACTCGACAAATATGTTTAAACGCACGATAGTCGCGAGCACTGCTGCTCTTGTTAACACTCCGTTAACTCGTGACTCGGGCAACCTCGTAAAATTCGATGGCCTGGCTACCACAGTTGGTGGCGGAACACCCATCAGCCGACTACCTATCATGGCAAAATCCGTATTGGATCTCTACGAGCTCTACAAGTTAGTTGTAATGCGAGGTGGACTGGTCGAGGTTATCAATAAGAAACTATGGCAGGAAATCATCAAGGGTCTTCGGTTGCCTGCAAGCATTACTTCCGCCGCGTTTACTTTGCGAACTCAGTAA
- Protein Sequence
- MSITPTTPLPGGLYSTNMFKRTIVASTAALVNTPLTRDSGNLVKFDGLATTVGGGTPISRLPIMAKSVLDLYELYKLVVMRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -