Basic Information

Gene Symbol
ARID5B
Assembly
GCA_003595255.1
Location
QKQZ01054851.1:6102-16489[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-24 1e-20 74.7 0.0 1 89 298 384 298 384 0.95
2 2 6 3.2e+04 -3.9 0.0 7 31 746 771 744 773 0.66

Sequence Information

Coding Sequence
ATGAGAGAAGGGCGAGATGAGACAAAGACAGAGAGCGAAAAAGGGGTTGAGGGGAAGAGAACgaaagggagggagagagagagagagagaaagagaggacaGAAGCCGACCGGTAGAAAGGTTATAGTAGAAGGGAAACTACTATTGGAAGAACTCTCGGGTGAGGGTGGGAAGAAGGGCGAAGGAGAAAGACGGGGTAGCGGACCGCGGAGGGACGAGGTGCTGACGATTTCAGAAAAAGTAGTCGTCCGCGTGCACGACCTAGTCACATGGCTTTCACCTACGTTGGAATGGTCGTGGGGCCGGGAGGTGTCCTATCCGACAACCCCGACGTCGTCCCCGGAGACCAGTCCGCTCAGATACGAGATGCCACAGCCACAGGTATTGACGGACCCGGGGATCGACTTCTCGGACGTCGACAAGCAGCAGAAGGAATACGAGACCAACctaaattctttgaaaagaTCGGATAGCTTCCAGACGAAGGTAGTGGTACTCTCGTATCCCAGGTACTGTCGCTATCGGGCGCTGCTACGTAGACTCGAGGGTGCCGAACCATCCTGGTTGTGCTCGTCCATCGCGGCCGCATTAGGGGGCTTTACCGCGACACCCGGCACCAGGGTGCTCTTCTGCAGGGACACATTTGACTATCCGGATCTCGAGACTCACGAGCTGCTGTGTAATCACTTGGCGCCGAAGCTAAAGGGCAGACCGAGAAGAAAACGTAAAAAGCGCAGCGCTTCGCCGGGCGAATCCTCGAACGAGAGCGAAGCCTCAGTAGCGTCGACGTCAAAGAGCACGTCGGCGATCACCAGCACTAGTCTGGTGATACCCACAGTCGGGAGACCGCCCTCGTCCGGGGTACGGCGGAGCGAGAGGAAGACTAGCGCGGAAGAAAAGAAGTTTATCACCGACGTGCAGAATTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTTTACACGAAGGTGCAAATGCTCGGTGGCTACGACTCTGTCAGTGCTGGCCAACTTTGGAAGAATATCTACAACGACATCGGTGGCAACACGGGTTCTACTAGCGCAGCGACTACTACACGTAGACACTatgaaaaGTTATTATTACCGTATGAAAGGTATCAACGAGGCGAAGAAACAAAAGTGAGACTGAATCACGGACGACGTACTAAGAGCATGAGTATGGTCGATGATTTAGATATCAAGGAGGAACCGAGCGATCTGTACACGTCGGAGACACCTCCACCTATAGATACAATTCCTACGACTACAACATCGCCCTTGCAAACAATAATGTCAGCAGCAACAACGACTTTACTCTCGAATGAGAAACCCAAAGCTGAAACCGGCAAGACATCCTCGTTACGTAGCGTGCGAGTAAAACCGGAACGCTTAAAATCCTTGAATACAATAATCGCCAATAATGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACGTCTATCTCAACGCCCAACAGCACACCCTCCACCACGCCGACGAATGGTACCAGTAACAATCAGAGCGTCTTGGAGCGGCAGCTCAACAGTCCTTTGATATCCCAACAAGTTCCACCGTCGTGTTCGCCACCAGGCTTGCCCGTGACTAGTGTACCGACGAACGCGTCGACGGTTGTCACTCTAACGCCTCCGCCTGAGAAAGATATGAAGGAGATCAAATTGGATCCCAAACAGACGACTCTAATGGCGCAGGGCAAGGAAAATATACCGTTGTTCGGCGGCGAGAAATTCGCGGAGAAGACGATGGTACCACCGGTCTCCAGATCGCCTGAGGTGATCGACCTTGAAAATGAGAGCGACACGAGTCGAGACAAAATAATCATTCCTAGCTTCAAGAAACGCAAGCTCGAGATTTTGCGCGAAGGCGGTCTCGAAGTTACCGCCGTCGAACTGGACGCACGGCCGAGCGTGATTCAAAGCAACGTCGCCATGTCGCCGCAGCAACatcaacagcagcagcagcagcaaccgTCACCCCTGCCGGCTACAATGAAGTCGACTGAAGAGAGGCAACCATCGATCTCGCCGTATCCGCTTCCAGTCACGCCCAACTCCATTCCTAAATTGATATCTGTCACCGTGACGCCCGATATAGGACACATGCTACCATCACCGCAAGAACATCAGAATCATCAGCCGCGAATATCAGCGGTCAAACAACTACCGGCTcatcataataataacaacattAACATGATGAACAATAATAATGTGACGAACAGTCGGGTGATAAATCTCGGTAGCTCGAACAATGCCGCGCTGTTGCAGCTGTACGCGAATGCGAACGTCGTACCGTCTGCGCAGCAGCCAAACCATCGTTTCGTTCCGCCAAATATTCCAAATGGCAGGTTATTACCGCCGAAAGTGACGCAATCACGATCAATATTTGTGCACAACGAAAGGACAGTTTACGGAAATCCTAAGGATATTCTTGTTTCTCCACCAAAATATCGCTCGTCGCATCCGCATTCGCATTCGCATTCGCATCCGCATTCGCATTCACATCCGCATTCGCATTCGCATCCACATTCGCATCCACAtcaacagcaacagcagcatcAGCATCAACCACGCTCACAACATTCGCAAATGAGTACCAACAACGATATCGGACAAGGAGGAAGTGTTCTCGACTTGACGCAAAAGTCTAGCGAGAAACCAACGTTTCCTAGGCCCAGTTTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCATTAAATCTGGACGTGCGGAATTCACCCGCCGCCAAGGAAAAACCGGATAGGCCTGCCATCGACTGTCCAAAGCGAGTACCCTTCCCCGCCTATCAAAACGTAATCGACAGTCGAACTATCGCGTCGAATAATCTCGAGATTACGCTAGTGAATCCCAAGCACAAAAACAATCATCACCTGAGTATGCCGTCTCACGTCCAAATACCGAGTCCACCTAACAAGAGCGGTGCGATAGGAACGATAAATAGCGCGCAAAGGAGGCAACAACCACCACCACCAACACAACAACCGCAACAAGTAAATGGAAAGTACACGGTGAGAAGCGAACCTGTTTCGCCATACACACCAAGAAAGCCAAGTCATCCCATCATACCGAACGTACCCAATTTGAACCATCTAAATCACGCAAGTGCGAGTCCATTTCCTAGGATGCAGACAACGACGttgcaacaacaacaacaacaaatGAGCATTGATAGGAGGAAAGCGGCTGCGGAAGCCGGCAGGGATCATCAACATCGTAGAATTAGCGAGGGCGAGAAATCATCCTTGGCAGCGCAACAACAGCAGcatcagcagcagcagcatcaGCAGCATCAGGAATCCAGGCAGAGCGAAGTCGGGCGACGACACAGTTTACCCAGCATACCATCGGGGTTTGTGCCGACGATACCACAGAATAACTCCACCAGCTTTCCGTTGCCGCAACTGCCAAATATGCCCGGCAAGTTCCTACCCCCGGCAATCCTGGACCCCATGTACTATTCCGCGTTCTACAACGGTTTATTCCCACCACCGATTCCGCCCACGGCCGCCGCAGCCGCCACCACGTCGTCGTTTCTACCACCAGAATTTAGCGCGTATTACAAGGAGTTGCTCGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCCGCCGCATCAACAGCCGGCCGCCCCAACGTCTAAATAG
Protein Sequence
MREGRDETKTESEKGVEGKRTKGRERERERKRGQKPTGRKVIVEGKLLLEELSGEGGKKGEGERRGSGPRRDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPTTPTSSPETSPLRYEMPQPQVLTDPGIDFSDVDKQQKEYETNLNSLKRSDSFQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITSTSLVIPTVGRPPSSGVRRSERKTSAEEKKFITDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGQLWKNIYNDIGGNTGSTSAATTTRRHYEKLLLPYERYQRGEETKVRLNHGRRTKSMSMVDDLDIKEEPSDLYTSETPPPIDTIPTTTTSPLQTIMSAATTTLLSNEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVPTNASTVVTLTPPPEKDMKEIKLDPKQTTLMAQGKENIPLFGGEKFAEKTMVPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVELDARPSVIQSNVAMSPQQHQQQQQQQPSPLPATMKSTEERQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPQEHQNHQPRISAVKQLPAHHNNNNINMMNNNNVTNSRVINLGSSNNAALLQLYANANVVPSAQQPNHRFVPPNIPNGRLLPPKVTQSRSIFVHNERTVYGNPKDILVSPPKYRSSHPHSHSHSHPHSHSHPHSHSHPHSHPHQQQQQHQHQPRSQHSQMSTNNDIGQGGSVLDLTQKSSEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPAAKEKPDRPAIDCPKRVPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHLSMPSHVQIPSPPNKSGAIGTINSAQRRQQPPPPTQQPQQVNGKYTVRSEPVSPYTPRKPSHPIIPNVPNLNHLNHASASPFPRMQTTTLQQQQQQMSIDRRKAAAEAGRDHQHRRISEGEKSSLAAQQQQHQQQQHQQHQESRQSEVGRRHSLPSIPSGFVPTIPQNNSTSFPLPQLPNMPGKFLPPAILDPMYYSAFYNGLFPPPIPPTAAAAATTSSFLPPEFSAYYKELLASSQPRLTGMTGQPPHQQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01254583;
90% Identity
iTF_01355099;
80% Identity
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