Sfur010689.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- nfxl1
- Assembly
- GCA_014356515.1
- Location
- chr6:29245447-29255692[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.27 1.4e+03 -0.4 0.5 4 10 203 209 202 209 0.91 2 4 2.2e-07 0.0011 19.1 15.6 1 19 217 234 217 234 0.99 3 4 0.67 3.5e+03 -1.6 1.0 7 13 238 244 238 245 0.74 4 4 3.6e-08 0.00019 21.6 11.7 1 19 270 288 270 288 0.99
Sequence Information
- Coding Sequence
- ATGTGTGAAAATTTCAAAATGGCTGGACGTGGTGCATCCAAGACCAACGCATGGAAAGATCGCAACAAAAACAGTCAGTCGAAAAAGCAGGAGGGGTCCCGAGTTGGCAATGAAAGTCAGGTTGTCCAACTATCGCAAGCTGAAGAGAAGTTTCTTGCGGCCAAGTCAAGAATGCAAGCCAGCGTGCAGAAACACCTGCATGACGACTATCACTCGTCCTCTGAGGAAGATGAACTCGAAACTGAAAACATCTTGAGCTCTGTGATTAAAAAGTATTCGTCCTTAACCGATGATGTCGATCTTGATCTTGGCAGAACACAGAAGTTTCTAGAAGATGCATTTCAATCAGGTGCTGCTGTATGTCTGATCTGCATTGCTACTGTGAAACGACCAGATGCTCGGTGGGCGAAGGACAGTGTCACTCATCAGAAGCAGGTATTGGAGGAGAGGCAGCAGGCGCCGCCCAATTGGGATAAACTCTCTTGGGCATGGTACGAATACATTCCAAAATGCAGAAACAATTACTCGTCAAGTGAGATCCCGCAGAAGTATTTCTGCTTCTGTGGCAGGGAGGAAGATCCAGAGTTTCATCCGTGGCTGGTGCCGCATTCTTGTGGCGAATCTTGTAACAAACCACTGCAGCCGTCCTGTGGTCACTTGTGTTTGCTACTCTGTCATCCAGGCCCATGTCCGCCATGTCCGAAGCAGGTGCAGTCGCGCTGCCACTGTGGCCGTGCGGCTCCGCGACCGCAGCGCTGCAGCAACAAGCAGTGGTCGTGCGGCAGCGCATGCGGCAAGTACCTGTCGTGCGGCAAACACACGTGCGACAACGTGTGCCACAGTGAGGCATGCGCCCCGTGTCCGCGCCAGTCCACGCAGAAGTGCCTCTGTCAGCGCAATACTGCGGTCAGGCAGTGCGCCGAACCCGTATGGCAGTGTGATCAGGGTGTCCACAGTGCGGGAATTATACGGGAATTTTTTGAGCCTGATATTGTGGACACCCTGTCAATCTAA
- Protein Sequence
- MCENFKMAGRGASKTNAWKDRNKNSQSKKQEGSRVGNESQVVQLSQAEEKFLAAKSRMQASVQKHLHDDYHSSSEEDELETENILSSVIKKYSSLTDDVDLDLGRTQKFLEDAFQSGAAVCLICIATVKRPDARWAKDSVTHQKQVLEERQQAPPNWDKLSWAWYEYIPKCRNNYSSSEIPQKYFCFCGREEDPEFHPWLVPHSCGESCNKPLQPSCGHLCLLLCHPGPCPPCPKQVQSRCHCGRAAPRPQRCSNKQWSCGSACGKYLSCGKHTCDNVCHSEACAPCPRQSTQKCLCQRNTAVRQCAEPVWQCDQGVHSAGIIREFFEPDIVDTLSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -