Sfur000432.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- grn
- Assembly
- GCA_014356515.1
- Location
- chr13:20978117-20980478[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-20 9.8e-17 60.5 4.7 1 35 45 78 45 79 0.98 2 2 1.2 1.9e+03 -1.2 0.6 2 9 96 103 96 105 0.84
Sequence Information
- Coding Sequence
- ATGAGAGTGGATGACGCCCAGATTTTTACCTTACAATTTACGGGTTTTCTCCATTTTCTGGACTGGGAATGCGCCAACAGGCGTTTCCCAAAATTCTCAATTTCTCTCCCAATCTACGAGAAAGGCCGAGAGTGCGTGAATTGTGGCGCGACATCGACGCCGTTGTGGCGTCGCGACGGCACCGGTCACTATCTGTGCAACGCCTGCGGACTCTACTACAAAATGAACGGACAGAATCGACCCCTCATCAAACCTAAACGACGATTGGTTACCAACAGTAGTGACAGCCAATGTTTCACCCTCACAACACAAAATGAATACTGTTTGCTCTCGCCCTTCAATAAAAGAGGAAGAGGTGGAGGAGGAGGAGAAGGAAGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGTGGAGGAGTAGGGGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGTCCTCCTTGTTACTGTTGAGAACCTAGAATAA
- Protein Sequence
- MRVDDAQIFTLQFTGFLHFLDWECANRRFPKFSISLPIYEKGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVTNSSDSQCFTLTTQNEYCLLSPFNKRGRGGGGGEGRGGGGGGGGGEGGGGVGGGGGGGGGEGEVLLVTVENLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -