Sfur000221.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- pnr
- Assembly
- GCA_014356515.1
- Location
- chr13:3097702-3106751[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2 6.8e+03 -3.0 0.1 11 20 13 22 13 25 0.77 2 4 3.2 5.2e+03 -2.6 0.0 8 14 166 172 164 178 0.71 3 4 7.6e-18 1.2e-14 53.8 3.2 1 34 195 227 195 229 0.97 4 4 3.3e-19 5.3e-16 58.1 4.6 1 35 256 289 256 290 0.97
Sequence Information
- Coding Sequence
- ATGACTCAAGACTCAACTATTCTATTTAATGACCTTCACTGGCGGCTCGTGCCCACGAAACAGAATGCGTCCTGCGATGTTATATATGATTTGAGACTCACAATGTTTCATGGTTCCAACACTCCGGGAGCAATGGCTATCTCATCTAACTACAACGAAAACTCAACAACCTGGGACACCAACCCCATCACTAGCACCTCGTCCACCCCCTCCTCCACCCCGGCCACCCACTGTCAACAACAACACCAACAACATCAACAGCAACAGCAACAACAACTACTCTACGTGCCCGGCAGAAACTGGGGTGGCGGATCTCCATCGTTGGCCACCCAAGGCGTAACGACCACCTCACACTATGACGCCCCGCAAATGCAGGCGTCCCAGGCGGCCTACCAGGGGGGTGTTAATCAGGGGGGACATCCGGCTGCAGCGCACCCTCCTCCCCACCCCCCTCCACATCACCATCTGCCGAGCACCTTCTACGCGGCGGCGCAAACATCGATTATGTGGCGAGCGTACGATTACAATAATCCGGCGCATTATGACGGCAGCATGGAGTTCCAAATGGGTGAGGGCCGGGAGTGCGTCAACTGCGGCGCCATTTCGACGCCACTCTGGCGTCGCGACGGAACCGGACACTATTTGTGCAACGCCTGTGGTCTGTACCACAAGATGAACGGCATGAATCGACCCCTGGTCAAACCCGCTAAACGGCTGGTCAGCCCTTCGTTGACTCAGACAGCCACCCGCCGTCTCGGTCTGTCGTGCAGCAACTGCGGCACGCGCACCACCACACTCTGGCGACGCAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTACAAACTGCACGCCGTGCCTCGGCCCCTGGCCATGCGCAAGGACGGCATACAGACGAGGAAACGCAAACCGAAGAAGGCGAACGCATCAGCTGCCGCTGCGGCTAGTGGAGGAAGCGGCGGGCAGGAGAGTGCGGTAGCGAGTGGAGCGCAAGACGCCGTCAAACACGATTCCCGGAGCGATCGTCCCTACCTCGGACACACCTCCCTGCTCCCGGGACCCAGCAGTTCAGCAGTTTCAATTAAATCCGAGCCACCCTCGTCCGCCTACCCGGACCACCTCTCCGGACACCACGTGACCACCGATCCCTACTATCACCATCACCATCATCATCAACAATCATCAGCCGCATCATCACCGTTCAGCAGTATGACGTCAACGCATCACCATCATCATCCCCATCATCATCAGTTGGGCTTCAACTTCCCGCACGCGCATGCACACGCAGGGGCGGCGCCGACGACGGCCGGATATCATCATCATCACCATCATTTGGGGCCTAAGATTATGGCTACTACTTAA
- Protein Sequence
- MTQDSTILFNDLHWRLVPTKQNASCDVIYDLRLTMFHGSNTPGAMAISSNYNENSTTWDTNPITSTSSTPSSTPATHCQQQHQQHQQQQQQQLLYVPGRNWGGGSPSLATQGVTTTSHYDAPQMQASQAAYQGGVNQGGHPAAAHPPPHPPPHHHLPSTFYAAAQTSIMWRAYDYNNPAHYDGSMEFQMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVSPSLTQTATRRLGLSCSNCGTRTTTLWRRNNDGEPVCNACGLYYKLHAVPRPLAMRKDGIQTRKRKPKKANASAAAAASGGSGGQESAVASGAQDAVKHDSRSDRPYLGHTSLLPGPSSSAVSIKSEPPSSAYPDHLSGHHVTTDPYYHHHHHHQQSSAASSPFSSMTSTHHHHHPHHHQLGFNFPHAHAHAGAAPTTAGYHHHHHHLGPKIMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -