Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chr14:5101658-5108917[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.031 1.6 9.5 1.1 1 20 447 466 447 468 0.93

2 9 0.026 1.3 9.8 0.1 2 23 475 496 474 496 0.96

3 9 0.014 0.74 10.6 3.6 1 23 557 579 557 579 0.98

4 9 1.1 58 4.7 0.1 2 23 604 625 603 625 0.84

5 9 0.08 4.1 8.3 1.0 1 23 634 656 634 656 0.99

6 9 0.15 7.6 7.4 2.0 1 23 662 685 662 685 0.97

7 9 0.00015 0.0077 16.9 2.6 1 23 690 713 690 713 0.98

8 9 0.00091 0.047 14.4 0.4 3 23 743 764 741 764 0.96

9 9 0.026 1.3 9.8 5.4 1 23 770 792 770 792 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.031	1.6	9.5	1.1	1	20	447	466	447	468	0.93
2	9	0.026	1.3	9.8	0.1	2	23	475	496	474	496	0.96
3	9	0.014	0.74	10.6	3.6	1	23	557	579	557	579	0.98
4	9	1.1	58	4.7	0.1	2	23	604	625	603	625	0.84
5	9	0.08	4.1	8.3	1.0	1	23	634	656	634	656	0.99
6	9	0.15	7.6	7.4	2.0	1	23	662	685	662	685	0.97
7	9	0.00015	0.0077	16.9	2.6	1	23	690	713	690	713	0.98
8	9	0.00091	0.047	14.4	0.4	3	23	743	764	741	764	0.96
9	9	0.026	1.3	9.8	5.4	1	23	770	792	770	792	0.97

Sequence Information

Coding Sequence: ATGGAATCCAATGTAAAACAGGCAATGGAATCGGTAGCCTCAGTGGTAGTCGGTTCCCAGAACGAGGTGATAGTCGACGGACAGCAGTGGAGTCAGACGAGGGAGGGAGGAGTGGTGTACTGGAGCCATGAGGAGGCGAGGGGTGGCGGGGAGGAGCATAGCACCGGAAGTGTACAGGAGGTGGTTCCGGTTTCCGGTGGAGATATTGGTGTGTTGCAGGGGCATGCGAATGAAGGCACCTTTCTCTGCCTTGACTGCGACATGCCTCTCAACATAGAAATGAAGAAGGACCATCTACTAGTTTGCAAATCCCGACAGCAGGACGCCGACAAAGTGGACCACCATCAAATGGTCACCTCAACACCACTTGGACATGGTCCCACTCTGTCGCTGTGTGTCAGTGACCAATCTCCAATCACCAAAATTAACAAAGATATGTGCAACAACACACCACTGACCAGAACTACAAATTTGCTACAGCCTGTTAGCAATCAACCAATTTCTAGAACATCAACATTGATACAAACTGTAAATGATGAAAATGCAAGATCAGCATTTTTGGAACAAAACCGTAGATCAGCAATACTTGTTTCTGAGGGGAACGTGGTGAGCAGAGTGGGGTTGATTACAAGTGAGGGGACTATTGTTAGGGGTGGGGGAGGGATGTTGACTACCGATTCTGAAGGGAATATTGTTAGGGGAGGGGGAGGTTTATTAACTACGGTTTCTCAAAGTAATATTGTGCAAGCAGGTGGAGGGTTGTTGACAACAGTTTCAGAAGCTAATCAAGTTGCTAGAGCAGGTTTACTAAGTGAACACTCTGTCATATCCAGGGCAAATCTCATGGATGGGCAGACAGTGATCTCTAGATCGGGAATAATTGACGAGCAAGGTATCACCAGACCAGTGATATCTATCGGGGGAACAATAACACAACAAACAATGATCACAAGCGTAGCTGATGAAAACCAACTGCGCCACTCTGCCATTATTGCTGCCAATGACAATCAGTTGTCTAGAGAGGTGTTGATTGATACAGATGGTGCGCAATTGTCAGGATCTACACTGATTACAAGTATTGGAGATGATGGTACACAGATGTCACGTTCAACCTTGATTGCAACTATGACAGAGGATGGGATTATGGTCACTACATCACCTAACGGTTCCTTACAGTTGATAGAGCCGGTTTTAACTCATGATCCCAATATCAATGAGGCATACGTTACGTCAACCACATCACCAGTATTGACAAAATTGAAACCGTTGCCAACCATTCAAGTGATCTGTCAACCTAATGGGAAACAGTGTAAGGTTTACACTGATGAGGTGGAGAATTACAAGTGCACAGTTTGTAAGTACACTACAACCACAGCAGAAAAGTTGGCTGGGCATAAGTGTGTGACACTGTCAGAGAAGTTGACTTGTGCGGAGTGTGGTTATGTGGCTGAAACTACAGCATCTTTGAGTCGACACACGGTAACACATAGGAAAGTGAGGAATACTTTCAGTTTACCGTTGAAATGTCCCCCAGAATTGGATCAGTTTGTTGAGAAACGTTGTTTGGAAAATGGGGATGAGGTGTTTGGTTGTAAACTGTGTAATTTCACCAGCTCATTGTATCTGTCAATAAAACATCACACTCAAACACACAGTATTGAGAATAAGTTTAGTTGTGACCAGTGTAACTTCAGTTGTAAGTTGGAGGTGAACTTGAGGAATCACAAGTTGACACATATGGAGCGGAAAGAAGCGGATGTAGGGGAGGAAGTTGGTAAGAAAAGGAAGAGGAGGGGTAAAGGTAGTATTGTTTGTAAGATTTGTGATTATGAGTACAGAAAAGGTGAGGAACCCAATGCACATATTGATAAACATTTGATTTTGAATTCAGATCAGATGTATCAATGTTTGGTGTGTAATTTGAACTGCGACACTCTGCAGACTGTGCGAGATCATGTGAGGATTCATGTGAAAAGTTGGCCGTACCAGTGTGAAAAGTGTCCCTATACGTGTTACAAGGTTTTGGAAATGAAAATTCATGAGAAAACCATACACTGTCGGAAAGAGTATTCCTGTGAGGAGTGCGATTACAAGTGTAAGTTGTCCAGTAACCTAAAACTTCACGTGAAAACTGAACACCCAAAGAAGCTTCCCAGAATGCCGATTCTGGAGCGGTCCCAAATTCAAACACGTCGTAGGGCAAAAATGGCAATGCTAGCTGTGAATTGTACAAAGTGTGATTTTATAACGAAGACGAGACCGGAATTGGAAGCACATATGAAGAAAGAGCACAAGAACAATAAAATTTATAAGTGTACAGAGTGTGATTATACATGTAAATTGTTGTGGAACTTTGAACATCACAAAATGTTACATGAGGGGGACGCTAGTTCCAGTGATTAG
Protein Sequence: MESNVKQAMESVASVVVGSQNEVIVDGQQWSQTREGGVVYWSHEEARGGGEEHSTGSVQEVVPVSGGDIGVLQGHANEGTFLCLDCDMPLNIEMKKDHLLVCKSRQQDADKVDHHQMVTSTPLGHGPTLSLCVSDQSPITKINKDMCNNTPLTRTTNLLQPVSNQPISRTSTLIQTVNDENARSAFLEQNRRSAILVSEGNVVSRVGLITSEGTIVRGGGGMLTTDSEGNIVRGGGGLLTTVSQSNIVQAGGGLLTTVSEANQVARAGLLSEHSVISRANLMDGQTVISRSGIIDEQGITRPVISIGGTITQQTMITSVADENQLRHSAIIAANDNQLSREVLIDTDGAQLSGSTLITSIGDDGTQMSRSTLIATMTEDGIMVTTSPNGSLQLIEPVLTHDPNINEAYVTSTTSPVLTKLKPLPTIQVICQPNGKQCKVYTDEVENYKCTVCKYTTTTAEKLAGHKCVTLSEKLTCAECGYVAETTASLSRHTVTHRKVRNTFSLPLKCPPELDQFVEKRCLENGDEVFGCKLCNFTSSLYLSIKHHTQTHSIENKFSCDQCNFSCKLEVNLRNHKLTHMERKEADVGEEVGKKRKRRGKGSIVCKICDYEYRKGEEPNAHIDKHLILNSDQMYQCLVCNLNCDTLQTVRDHVRIHVKSWPYQCEKCPYTCYKVLEMKIHEKTIHCRKEYSCEECDYKCKLSSNLKLHVKTEHPKKLPRMPILERSQIQTRRRAKMAMLAVNCTKCDFITKTRPELEAHMKKEHKNNKIYKCTECDYTCKLLWNFEHHKMLHEGDASSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -